Gadus morhua (Atlantic cod): 115552005
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Entry
115552005 CDS
T10832
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
gmh03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115552005 (upf3b)
mRNA cycle factors
P-body specific factors
115552005 (upf3b)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115552005
NCBI-ProteinID:
XP_030223535
Ensembl:
ENSGMOG00000001621
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Position
10:complement(26197055..26200637)
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AA seq
504 aa
AA seq
DB search
MKEDKENTRPKERRMEGKCEEGEKIEKLKERREAMTKIVIRRLPPSLTKEELEEQLQPLP
ELDYLEFFSSDTSLSPHVFSRAYINFKQQEDIVLFRDRFDGYVFIDGKGQEYTAVVEFAP
FQKIGKKRIKKRDAKCGTIDDDPDYERFLEVYNGHDDEKMTSTPETLLEELEAKTKELGA
RKTTPLLDFLKNKQRIREEKKEERKRRELERKRQRDEERRKWRDEERRRRKDNDKMKKPD
RPSDKDQVKEEPKIKLLRKPDRGEEMDTEKPKDKPKRLERPMKDDKVMGSLDLKKRTIID
NKEDRPRKVDEEGRKEFRERDTVRDRERDAVRDRDAVRDRDAVRDRDAIRDRDVVRDRDV
VRDRERDRERDRERRQKEKDRIRRQDEDRRRRRERHDGENACRKREEAGKRDKERDWDKK
RGGSANESAANERSAKDNRKEENMKRDRMRNKDRPAIQLYQPGARNRNRGGGGGGGGGGS
GGESQPAEGKPDNESKRANDMGDD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacacccgccccaaggagaggaggatggaggggaaatgcgag
gagggagagaagatcgagaagctgaaggagaggagagaggcgatgacaaagatcgtgatc
agacgtctgcccccgagcctcaccaaggaggagctggaggagcagctgcagccgctgcca
gaactcgactatctggagttcttctccagtgacaccagcctctccccccacgtcttttca
agggcgtatattaacttcaaacaacaagaggatattgtcctcttcagagatagatttgat
ggatatgttttcatcgatggcaaaggacaagagtatacagctgttgtggagtttgcgcct
tttcagaagattggcaagaaaagaatcaaaaaacgagatgcaaagtgtggaaccatagat
gatgatcctgattacgaaagattcctggaagtatataatggacatgatgatgaaaagatg
acatccactccagagactctcttggaagagcttgaggcgaaaaccaaagagcttggtgcc
agaaaaacaactcccctcttggactttctgaagaataagcagagaatcagagaggagaag
aaggaggagaggaagaggagggagcttgaacgcaagagacagcgtgacgaggaacgccgt
aagtggcgcgacgaagagcgacggagacgcaaagacaacgacaagatgaagaaaccggac
cggccctcagacaaagaccaagtgaaggaggagcccaagatcaagctcctgaggaaacca
gacagaggggaggagatggacacggagaagcctaaagacaagccgaagagactcgagagg
ccaatgaaagacgataaagtgatgggcagtttggatctgaagaagaggacgataatcgat
aacaaggaagaccgacccaggaaggtcgatgaggagggacgcaaagagttccgggagcgt
gacaccgtccgggaccgggaacgtgacgctgttcgagacagggacgccgtccgagaccgg
gacgccgtccgagaccgggacgccattcgtgaccgggacgttgtcagagaccgggacgtc
gtcagagaccgggaacgcgaccgggagagggacagggaacgccggcagaaggagaaggac
cgcatccggcgtcaggacgaggacaggaggcggcggcgggagcgccacgacggcgagaac
gcctgcaggaagagagaagaggccgggaagcgggacaaggagcgcgactgggacaagaag
aggggaggcagcgccaacgagtccgccgccaacgagcggtcggccaaggacaaccggaag
gaagagaatatgaagagagatcgcatgcgcaacaaggatcgacctgccatccagctttat
cagccaggggcccgcaaccgcaaccgtggtggcggagggggaggaggtggggggggcagt
gggggagagtcccagccggccgaaggaaagcccgacaacgagtccaagagagccaacgac
atgggagacgattga
DBGET
integrated database retrieval system
