KEGG   Gadus morhua (Atlantic cod): 115552022
Entry
115552022         CDS       T10832                                 
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
  KO
K08018  Rap guanine nucleotide exchange factor 2
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04010  MAPK signaling pathway
gmh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115552022 (rapgef2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115552022 (rapgef2)
SSDB
Motif
Pfam: RasGEF PDZ RasGEF_N RA PDZ_6 cNMP_binding RA_2 PDZ_2
Other DBs
NCBI-GeneID: 115552022
NCBI-ProteinID: XP_030223562
Ensembl: ENSGMOG00000000389
LinkDB
Position
10:13505791..13568535
AA seq 1615 aa
MASYVDNSFRQAVMMNPAERTQQDLEIVYSYLHGMEALSNLREHQLRMMCETVRYERHEA
NEVLYYPDDLGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMEESEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPPGKPPAGRSYHTLPADL
ARLHLADGPHSQVTHGSSSQSGCSVTSDSGSSSLSDLYQATEGDSGDMDLSGLPETAVDS
EEDDDEEELERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANMTMSVRR
ELCAVMVFAVVERAGTAVLNDGEELDSWSVILNGSVEVLHPEGRAEILCMGNSFGVSPTL
EKEFMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRELDRTGT
RKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGKKLLEWFHDPSL
RDKVTRVVLLWVNNHFNDFEGDAAMTRFLEEFENNLERERMCGHLRLLNIACAAKAKARV
VTLTRASRDAPLAFSLLGGQDKGFRVFIDAVEPGSKAAESGLKRGDQILEVNGQNFENVQ
LMKANEILKNNTHLSITVKTNLLVFKDLLARPDQDPSEGEVEEEVERKNGAPHLPKIGDL
KKASRFSIPDLAVDVEQVLALEKSSKKGKGGTVGGRNKLKKIFDKTLTSILPPKPYNDVA
VGQSQDDSIVGMKQSKQIPAALPVSGNLSSSNPDLLQTHHRILDFNNQSDLSDQVLRVFK
ADQQSRYIMIGKDTTAREVVAQSIREFALTAAPDAYSLCEVSVTPEGVIKQRRLPEQLSK
LADRIQLSGRYYLKSNMETETLCSDEDAQDLLREGQICLLQLSTVEVATQLSMRAFTLFC
AIEPTEYIDDLYKLRSRPGPAALKRFEDAINQETFWVASEVTREPHQLKRMKTVKHFIKI
ALHCRDCKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFGDLQDLFDPSRNMAKYR
NVLNNQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLINFEKMRMIAKEIRHVGRMASVN
MDPALMFRTRKKKWRSLGRSLSQGSANAAVLDVSQAGGHKKRVRRSSFLNAKKLYEDAQM
ARKVKQYLAHLRLDDSEDSLQALSLQCEPSVCTLPKIPSGRRSDTSPVVARAASQQRGQL
ARGGPGLQVPAVALYPSRKKVPVKDLPPFGTSSPHSLKKILSLSEEGTDRQRRPQEDTVS
NTSSQLSSPPTSPQSSPKKGVSRGGESYAESGVHSDVSSRSSLLSTSSFDMQEQRRQRSS
GGADPALGGGGARLERRATTDPDQYSLGSYSSMQDCRSLYAGGPTVLSSPSSEELTGDQG
DRVSLDAADSGRGSWTSCSSGSHDNIQTMQGRSWETLAFVAGGGGVVGGGGGVPAGLWAA
QTRGSWASASSSSSSSAAYWGEESEGDTGTIKRRGGKEVNADGETSSITSTGSEDAKHRA
TPSPITTGGKGLLARKDGRYREPPPTPPGYTALTAADLPDGPPPAAPSAPVATTTAGPLC
SRRPPDYSTALQRSRMVTQSPDLQHRPPRGPPHGPAHGPPRPEEEEEDDEQVSAV
NT seq 4848 nt   +upstreamnt  +downstreamnt
atggcgtcctacgtggataacagtttccggcaggcggtgatgatgaacccggcggagaga
acgcaacaggacctggagatcgtgtactcctatctccacggtatggaggccttgtccaac
ctgagggaacaccagctgaggatgatgtgtgagacggttcgctacgagagacacgaggcc
aacgaggtgctgtactatcctgatgacctgggtagctgttggtacattctgctctcaggc
tccgtcttcatcaaggagtccatgttcctcccaagaagcagctttgggaagcggtctgca
ggaagtttgcggcgtggatgcgagtgcatcgttctggaaccttctgagatgattgtggtg
gactacatggaggagtccgaggagtacttccagcgccaggcgtcccaccgccagtcgcgg
cgccgcttccgtaagatcaaccagaagggcgagcggcagaccatcatcgacacggtggac
ccctacccccccggcaagcccccggctgggcggagctaccacacgctccctgcagacctg
gcccggctccacctggccgatggccctcactcccaggtgacacacggctcctccagccaa
tcaggatgtagtgtcaccagtgactctgggagcagcagcctatcagacctttaccaggcg
actgagggtgacagcggggacatggacctcagtggtctccctgagaccgccgtggactct
gaggaagacgatgatgaggaggagctggagcgggcgtcggaccccctgatgagccgggac
atcgtgagggactgcctggagaaagaccccatggaccggaccgacgacgacatcgaacaa
ctgctggagttcatgcaccagctgccggccttcgccaacatgacgatgtccgtgcgccgt
gagctatgtgcggtgatggtgttcgccgtggtggagcgcgccggcaccgccgtgctcaac
gacggagaggagctggactcgtggtcggtgatcctgaacggctcggtggaggtgctccac
ccagagggccgggcggagatcctctgcatggggaacagcttcggggtcagccccaccctg
gagaaggagttcatgaagggggtgatgaagaccaaggtggacgactgtcagtttgtgtgc
attgcgcagcaggactactgctgcatcctgaatcaggtggagaagaacatgcagaaggtg
gaggaagagggcgagatcgtcatggtgaaggagcaccgagagctggaccggaccgggacc
cgcaagggccacatcgtcatcaagggtacgacggagcgtctgacgatgcacctggtggag
gagcactcggtggtggaccccacctacatcgaggacttcctgctgacctaccgcaccttc
ctgtccagccccatggtggtcggcaagaagctgctggagtggttccacgaccccagcctc
agggacaaggtaacacgcgtggtgctgctgtgggtcaacaaccacttcaacgactttgag
ggcgacgcggcgatgacccgcttcctggaggagttcgagaacaacctggagagagagagg
atgtgcggccacctgcggctcctgaacattgcgtgcgcggcgaaggcgaaggcccgcgtg
gtgacgctgacccgggcctcgcgggacgccccgctggccttcagcctgctgggggggcag
gacaagggcttcagggtgttcatcgacgccgtggagcccgggagcaaggcagcagagagc
ggcctgaagaggggagaccagatcctggaggtcaacggtcagaacttcgagaacgtccag
ctgatgaaggccaacgagatcctgaagaacaacacccacctgtcaatcacggtgaagacc
aacctgctagtgtttaaggacctcctggcccgcccggaccaggacccctctgagggggag
gtggaggaggaggtggagaggaagaacggcgccccccacctccccaagatcggagacctg
aagaaggccagccgcttctccatccccgacctggctgtggacgtggagcaggtgctggcc
ctggagaagagcagcaagaaggggaaaggcggcacggtgggcggccgcaacaagctcaag
aagatcttcgacaagacactcaccagcatcctgcccccaaagccctacaacgacgtggcg
gtgggccaatcgcaggacgacagcatcgtgggtatgaagcagtccaagcagatcccggcg
gcgctgcccgtcagcgggaacctgtcctcctccaaccccgacctgctgcagacacaccat
cgcatcctggacttcaacaaccaatcagacctctcggaccaggtcctgcgggtgttcaag
gcggaccagcagtcgcggtacatcatgatcgggaaggacaccacggcgcgggaggtggtg
gcgcagagcatccgggagttcgccctgaccgccgcgcccgacgcctactcgctgtgcgag
gtgtccgtcaccccggagggcgtgatcaagcagagacgcctcccggagcagctgtccaag
ctggccgaccgcatccagctcagcggcaggtactacctgaagagcaacatggagacggag
acgctgtgctcggacgaggacgcccaggacctcctgcgggagggccagatctgcctgctg
cagctcagcacggtggaggtggccacgcagctcagcatgcgcgccttcacgctgttctgc
gccatcgagcccaccgagtacatcgacgacctttacaagctgcgctcgcggcccggcccc
gccgccctgaagcgcttcgaggacgccatcaaccaggagaccttctgggtggccagcgag
gtgacgcgggagccccaccagctcaagaggatgaagaccgtcaagcacttcatcaagatc
gccctgcactgccgcgactgcaagaacttcaactccatgttcgccatcatcagcggtctg
aacctggccccggtgtcccggctgcgggggacctgggagaagctgcccagcaagtacgag
aagctgttcggggacctgcaggacctgttcgacccgtccaggaacatggccaagtaccgc
aacgtgctcaacaaccagaacctgcagccgcccatcataccgctgttccccgtcatcaag
aaggacctcaccttcctccacgaagggaacgactccaaggtggacgggctcatcaacttt
gagaagatgaggatgatcgccaaggagatccgccacgtgggccgcatggcgtccgtcaac
atggaccccgccctcatgttcagaaccaggaagaagaagtggaggagtttaggcaggtct
ctgagccagggcagtgccaacgcggcggtgctggacgtcagtcaggccggcggccataag
aagcgcgtgcggcgcagctccttcctgaacgccaagaagctgtacgaggacgcgcagatg
gcccgcaaggtgaagcagtacctggcccacctgcggctggacgacagcgaggacagccta
caggccctgtccctccagtgcgagccctccgtctgcaccctccctaagatcccgagcggg
cgacggtcagacacgtctccggtggtggcgcgggcggctagccagcagcgcgggcagcta
gcgcgggggggccccggcctgcaggtccccgccgtggccctctacccctcccgcaagaag
gtcccagtgaaggacctgccccccttcggcaccagctctcctcactccctgaagaagatc
ttgtctctgtcggaggaggggaccgacagacagaggagaccccaagaggacacggtgtcc
aacacctcctcccagctctcctccccgcccacctccccgcagagctcccccaagaagggt
gtgtccagaggaggtgagagctacgcagagagcggtgtccacagcgacgtctcctcccgc
tccagcctcctcagcacctcctccttcgacatgcaggagcagcggaggcagcggagctct
gggggggccgacccggccctgggggggggcggggcccggctggagagacgggccaccacc
gacccggaccagtacagcctgggctcctactcctccatgcaggactgccgctccctgtac
gcgggggggcccacggtgctgtcctcccccagcagtgaggagctgacgggggaccagggc
gaccgggtgtccctggacgcggccgacagcgggcgtggctcctggacctcctgctcctcg
ggctcccatgacaacatccagaccatgcagggccgcagctgggagacgctggccttcgtg
gcggggggcggcggcgtggtgggcggggggggcggggtcccagccgggctgtgggccgcc
cagacccgcggcagctgggcgtcggccagctcctcgtcctcctcctcggcggcctactgg
ggggaggagtcggagggggacacgggcaccatcaagaggaggggcgggaaggaggtgaac
gccgacggggagaccagcagcatcacctccaccggctcggaggacgcaaagcaccgcgcc
acgccctcgcccatcaccacggggggcaaggggctgctggcgagaaaggacgggcgttac
cgggagcccccccccacccccccgggctacacggcgctgaccgccgccgacctgccggac
ggcccgccccctgccgcccccagcgcccccgtcgccacgacgacggccgggcctctctgc
agccgccggccccccgactatagcacggcgctgcagcgctcccgcatggtcacgcagtca
cctgacctgcagcaccggcccccccgcggccccccccacggccctgcccacggcccccct
cgcccagaggaggaggaggaggacgatgaacaggtgtctgcagtctga

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