KEGG   Gadus morhua (Atlantic cod): 115552027
Entry
115552027         CDS       T10832                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04114  Oocyte meiosis
gmh04120  Ubiquitin mediated proteolysis
gmh04218  Cellular senescence
gmh04310  Wnt signaling pathway
gmh04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115552027
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115552027
   04340 Hedgehog signaling pathway
    115552027
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    115552027
   04218 Cellular senescence
    115552027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115552027
   03036 Chromosome and associated proteins [BR:gmh03036]
    115552027
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115552027
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115552027
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_EML_2 Beta-prop_SCAP Beta-prop_WDR75_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_IP5PC_F WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 WD40_like Beta-prop_HPS5 Beta-prop_IFT140_1st F-box Beta-prop_WDR11_2nd Beta-prop_Nup120_160 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_VPS8 WD40_2 DUF6188
Other DBs
NCBI-GeneID: 115552027
NCBI-ProteinID: XP_030223584
Ensembl: ENSGMOG00000006866
LinkDB
Position
10:complement(15540781..15559905)
AA seq 556 aa
MTSLPLRAADAGLGFHFQSEFRGGIVNMEPEMEDKTLELMNTGMDSQTLVDDLSPKKNTV
LKLPQISNGPVTGSRKRPSEGNYDKDKEHCIVLFDQWSEADQVEFVEHLISRMCHYQHGH
INSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCSAELVCKEWQRVISEGMLWKK
LIERMVRTDPLWKGLSERHQWEKYLFKNRTTEVPPNSYYHSLYPKIIQDIETIEANWRCG
RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKILTGHTGSVLCL
QYDERVIVTGSSDSTVRVWEVTSGEVLNTLIHHNEAVLHLRFANGLMVTCSKDRSIAVWD
MASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI
ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK
VWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVSTNG
QSEGRSPSRTYTYISR
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgacgtctctgcctttgcgggcggccgacgcagggttgggtttccattttcagagcgag
tttcgggggggaatcgtcaacatggagccggagatggaggacaaaacgttggaattaatg
aacacgggcatggactcacagaccctcgtagacgacctgtcgccaaagaagaacaccgtt
ctcaagctcccccagatcagtaacgggccggtgacgggctcccgcaagcggccgtctgag
ggcaactatgacaaggacaaggagcactgcatcgtcctgtttgaccagtggtcggaggca
gaccaggtggagttcgtggagcacctgatctcccgcatgtgtcactaccagcacggccac
atcaactcctacctcaaacccatgctgcagagggacttcatcacagcgctgccagcccag
ggcctggaccacatagcggagaacatcctgtccttcctggacgcccgctcgctgtgctct
gcggagctggtgtgcaaggagtggcagcgggtcatctcggagggcatgctctggaagaag
ctgatcgaacgcatggtccgcaccgaccccctgtggaaggggctgtccgagagacaccag
tgggagaagtacctcttcaaaaatcgcactacagaagtcccccccaactcgtactaccac
tccctataccccaagatcatccaagacatagagaccatcgaggcgaactggcggtgcggc
agacacaacctgcagaggatccagtgtcgctccgagaacagtaaaggggtctactgcctg
cagtacgatgacgacaagatcatcagcggccttagggacaattccatcaagatatgggat
aagcagtccctggagtgtctgaagatactgacgggacacacgggttccgtcttgtgccta
cagtacgacgagagggtcatcgtaacgggctcctcggactccaccgtcagggtgtgggag
gtgacgtcgggggaggtgctcaacacgctcatccaccacaacgaggcggtgcttcacctg
cgcttcgccaacggcctgatggtcacgtgctccaaggaccgctccatcgccgtgtgggac
atggcgtcgcccaccgacatcagcctgcgccgcgtgctggttggccaccgcgccgccgtc
aacgtggttgacttcgacgacaagtacatcgtgtcggcctcgggggaccggaccatcaag
gtgtggagcaccagcacctgtgagtttgtgcgcacgctcaacggccacaagcgagggatc
gcgtgtctgcagtaccgggaccggctggtggtcagcggctcgtccgacaacaccatcagg
ttatgggacatcgagtgcggcgcatgtttgcgtgtgctggaggggcacgaagagctggtg
cgctgcatccgctttgacaacaagaggatcgtcagcggagcctacgacggtaagatcaaa
gtgtgggaccttcaggccgccctggacccccgcgccccggccagcaccctctgtctgcgc
acgctagtggagcactcgggccgtgtgttccgcctgcagtttgacgagttccagatcatc
agcagttcccacgacgacaccatcctgatctgggacttcctgaacgtctcgaccaacgga
cagtcggagggacgatctccctcgcgtacctacacgtacatctctagatag

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