KEGG   Gadus morhua (Atlantic cod): 115552036
Entry
115552036         CDS       T10832                                 
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
  KO
K10779  transcriptional regulator ATRX
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115552036 (atrx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmh03000]
    115552036 (atrx)
   03036 Chromosome and associated proteins [BR:gmh03036]
    115552036 (atrx)
Transcription factors [BR:gmh03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    115552036 (atrx)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    115552036 (atrx)
SSDB
Motif
Pfam: SNF2-rel_dom ADD_ATRX
Other DBs
NCBI-GeneID: 115552036
NCBI-ProteinID: XP_030223603
Ensembl: ENSGMOG00000005751
LinkDB
Position
10:complement(18618431..18632258)
AA seq 1564 aa
MAEECNTDDALQKKVNCTACGQQVNQFQRNSVLEHPVLKVLICKSCYKFYRSDDISKDSD
GMDEQCRWCAEGGKLICCDFCNNAFCKKCILRNLGRKELSVITNENSKWHCYVCTSEPLS
DLSSKCQRIMEKLETVWNKERRPEKSQERDGKQHRGKEAKKHKAVNGKEHGEDSGTMTFC
YKKLHVSKELVKKAKKLVETTAGLNNTFIQFIQQASEKQGDNSIRYRHLNAFKSVLSDLK
KAHTALEDALEPEFKNMELQNGDEGLHVHRKSVEDADTELVDDIAAAAEPEEEEGDNKEE
EEVEDGDEDSDRSPDAEPKGVDTGTAKANVTAQSDDEEDDDDDDMPMDEMSLDHDIVSVP
PSVPEELFQMVESLADSSMLSQTDDAANDGAGEDTAAVSKEKVANSQRHQPKVKNLIVKL
TPVPVVTTCSSRSSRSSRSRSKSKSKDKEVETPKKSKKNKKEGKKNEVEDDVEKEEDDVE
KEDDVEKEEDEVEKEEDEVEKEEEQAVEEDGEEEDEAEEEEKDSGSEVKQRNGTPTDCVP
SKRRSSRTKTTPLRKQAEIKAKEDSSETEGQNRDKADKAGKSSSTKTKNGKRTKTSSPED
KGEESDSDSVPDILLQKVAEEHSSAEGGVTKSAKKCLFKQKEKEKPSKRKRKSDTSDSDP
PEQGKSKSSVASKKSSKKKKHSGSEDSEPEKATKRRSSRTKKKEEVKKSPDAKARDLKRS
YEKKRTARKAKGASKSSSSDEEDGDEGAIGGEDSGEDSDQQRIKPLVEDNVATASGNFHQ
SSGDEDGNKDGSHPGEDDDDAENRIAKKMLLAQIKSNYSSGDDSSSDGEGGDNEDKKSKK
VKKEKKDDDEEEEEDGDEDQEDNDDDDYEEDSQQGSASDGDTKKGRRHALLRHKLTLSEG
ESADEKSGGKGKKSKDPKKRSWRKVGSDDSDSEFEKSGSASDDESVMSEELSGSEEDGKR
RKTRSSNKKDVEKRSSKQKQKKKRRRIKVQDSSSSNDKSGDDEDGDDEDGDDKDTPKGRK
RIRKILKDDKLRTETRDALKEEEDRRQRIAEREMLREKMIETAEIKEASQMDCPITLKMV
LDEDEETKEPMVQVHKKLVTKLKPHQVEGVQFIWDCCCESMKKTEKSSGSGCILAHCMGL
GRPCSAVLRLALQVVTFLHTMLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQHGMKDEES
LEVTELATVKRPQERAYALQRWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVD
PGPDFVICDEGHILKNEASAVSRAMNSIKTRRRVILTGTPLQNNLIEYHCMVNFIKENLL
GSVKEFRNRFINPIQNGQCADSTEQDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK
HEYVLAVRVTPIQCKLYRYYLENFTGVGNANEGGKGRAGTKLFQDFQMLSRIWTHPWCLQ
LDYISKENKGYFDEDSMEEFIASETEESSMSMTSEDDKKKKKKGKGKKKKGSDDSDSEDL
EVIKEWNTSSRGGDPAGRNRAEPVEEARPSASGPGSPSPDWHKEFVTEPVCPASRSAHQR
RSSD
NT seq 4695 nt   +upstreamnt  +downstreamnt
atggcagaggagtgcaacacagatgatgccttgcagaagaaggtcaactgcacagcgtgc
gggcagcaagttaatcagttccaacgtaactctgttcttgagcatcctgtgctcaaagtg
cttatttgcaagtcgtgttacaagttttacagaagtgatgacatcagcaaagactcggac
ggaatggatgagcagtgcaggtggtgtgctgaagggggcaaactgatttgctgcgacttt
tgcaacaacgccttctgcaagaagtgcattctgcgcaacctgggacggaaggagctgtcc
gtcatcaccaatgagaactcaaagtggcactgctacgtgtgcacctctgagccactctct
gacttatcctccaaatgccagcgcatcatggagaagttagaaacggtgtggaacaaggag
cgtagaccagagaagagtcaggagcgcgacggcaagcagcacagagggaaagaggcgaaa
aaacacaaagccgtcaacggaaaggagcacggcgaggactctgggaccatgaccttctgc
tacaaaaagctgcacgtttccaaagagctcgtcaaaaaggccaagaagctggtggagacg
acggcgggcctcaacaacacgttcattcagttcatccagcaggcgagcgagaagcaaggg
gacaactccatcaggtatagacacttgaacgcgttcaaatcggtgctcagcgatttgaag
aaagcccatactgccctggaggacgcgttggagcccgagttcaagaacatggagttgcaa
aacggcgacgaggggttacacgttcacaggaaaagcgtggaggatgcagacacggaactc
gtggacgatatcgctgccgcggcggagccagaggaggaagagggggacaacaaggaggag
gaggaggtggaggacggtgatgaggacagcgatcgatcccctgatgctgagccaaaggga
gtggacacgggaaccgccaaggccaacgtcacggcgcagtccgacgacgaggaagacgac
gacgacgacgacatgcctatggatgagatgtccctggaccacgacatcgtctcggttccc
ccgtcggttcccgaggagctcttccagatggtggagagcctcgctgactcctccatgctc
tcgcagacagacgacgcggccaacgacggggccggcgaagacacggccgccgtgtccaag
gagaaggtggcgaactcccagcgacaccagcccaaggtgaagaacctcatcgtcaaactc
acccccgtgccggtggtgacgacgtgcagctccagatcctccaggtcctcaagatccagg
tccaagagcaagagcaaggacaaggaggttgaaaccccaaagaagagcaagaagaataag
aaggaagggaagaagaacgaggttgaggatgacgtggaaaaagaggaggatgacgtggaa
aaagaggatgacgtggaaaaagaggaggatgaagtagaaaaagaggaggatgaagtggaa
aaagaggaagaacaggcggtagaagaggatggtgaggaggaggatgaggcagaggaggag
gagaaggactcgggttctgaggtgaaacagaggaatggaactccaactgattgcgtcccc
agtaagcgtcgctctagccggacaaagaccacaccactcaggaagcaggcggagatcaag
gccaaggaggactcctcagagacagaaggtcagaaccgggacaaggctgacaaggccgga
aagtccagcagcaccaagaccaaaaacggaaaacggaccaagacctcttcgcccgaggac
aaaggggaggagtctgactcagactccgtgcccgacatactgctgcagaaggtggcggaa
gagcacagttccgctgaagggggggtcacgaagagtgccaagaagtgcttgtttaagcag
aaggagaaggaaaagccgagcaagcgcaagaggaagtcggacacctccgactctgacccg
ccggagcagggcaaaagtaaatcttcagtggcatccaagaagtcctcaaagaagaagaag
cacagcggctcagaggactctgagccggagaaggccaccaagagaaggtcaagccggacg
aagaagaaggaagaggtcaagaagtctcccgacgccaaggccagggatctgaaaaggtcc
tacgaaaagaagcgaacggcgaggaaggctaaaggggcgtctaagtcgtcctccagcgac
gaggaggatggggacgaaggggccatcggtggggaggactccggagaagacagcgaccag
cagaggatcaagcctcttgtggaggacaacgtcgccacagcaagcggcaacttccatcag
tcctcaggggatgaagatggcaataaagacggctctcatcctggtgaagacgatgacgac
gctgaaaaccgaattgcaaagaaaatgcttctggcacaaataaagtccaactactcgtct
ggtgacgacagttcctcagacggtgaagggggagataacgaagacaagaaatccaagaaa
gtaaagaaagagaaaaaagacgatgacgaggaggaggaagaagacggagatgaagatcag
gaagacaacgacgatgacgactacgaggaggactcccagcaaggctccgcctcggacgga
gacacgaaaaaggggcggcgccacgccttgctgcgccacaaactcactctgagcgaagga
gagtcggcggacgagaagtctggtggcaagggcaagaagagcaaggaccccaagaaacga
tcatggcggaaagtcggcagtgacgactcggactctgagttcgagaagtccggatccgcc
agcgacgatgagtctgtgatgagcgaggagttgagcgggtcagaagaggacggcaaacgc
agaaagaccaggtcgtccaataagaaagacgtggagaaacggagctccaagcagaaacag
aagaagaagaggcgcagaattaaagtgcaggattcctcctccagcaacgacaagagcggt
gacgatgaagacggggacgacgaagacggagacgataaggacacgcccaagggccgcaag
aggatccgcaagatcctgaaggacgacaagctccgcacggagacccgggacgctctgaaa
gaggaggaggaccggcgacagcgtatcgcggagagggagatgctgagggaaaaaatgata
gagacggcggagataaaggaggccagtcagatggactgtcccatcaccctgaagatggtg
ctggatgaggatgaagagacaaaggagcccatggtgcaggtgcacaagaagctggtcacc
aagctgaagccgcatcaggtcgaaggtgtgcagttcatttgggactgctgctgcgagtcg
atgaagaagactgagaagtcatccggctctgggtgcatcctggcccactgcatgggcctg
ggaagaccctgcagtgcagttctgcgtttggccctgcaggtggtgacgttcctccacact
atgctgctctgtgagaagctcaacttctccacggccctggtggtctgcccgctgaacacg
gtcctcaactggctcaacgagtttgaaaagtggcagcacgggatgaaggacgaggagagc
ttggaggtgacggagctggccacggtgaagaggccccaggagcgtgcctacgccctacag
cggtggcaggaggatgggggcatcatgatcatcggctacgagatgtacaggaacctcacc
cagggacggaacatcaagagcaagaagctcaaggagaccttccagaagactcttgtggat
cccggtccggactttgtgatctgtgacgagggccacatcctcaagaacgaggcgtctgcc
gtgtccagggccatgaactccatcaagacccgccggagggtcatcttgaccggaacgccg
ctgcagaacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctgctg
ggctccgtgaaggagttcaggaaccgattcatcaaccccatccagaacggccagtgtgcc
gactccactgagcaggacgtgcgcgtcatgaagaagagggcccacatcctctacgagatg
ctggccggctgcgttcagagaaaggactacacggcactgaccaaattcctacctccaaag
catgagtatgtgctcgctgtgagggtgacgcccattcagtgtaaactttatcggtactac
ctggagaactttacaggtgttggcaacgccaacgaggggggcaagggacgcgctgggacc
aaactcttccaggacttccagatgctgagcagaatctggacccatccctggtgccttcag
ctcgactacatcagcaaagagaacaagggatactttgacgaggacagcatggaggagttc
atcgcctcggagaccgaggagtcctccatgagcatgacctcggaagacgacaagaaaaag
aaaaagaagggcaaggggaagaagaagaagggctcggacgactcggacagcgaagacctg
gaagtgattaaggagtggaacaccagctcccggggaggggacccggcggggaggaaccga
gcagagcccgtggaagaagcccggccctccgcatcgggcccagggagcccgtctcccgac
tggcacaaggagtttgtcaccgagcccgtctgccctgcatcccggtctgcgcatcaaagg
cgctcctcagactga

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