Gadus morhua (Atlantic cod): 115552036
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Entry
115552036 CDS
T10832
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115552036 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115552036 (atrx)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115552036 (atrx)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
115552036 (atrx)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115552036 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
115552036
NCBI-ProteinID:
XP_030223603
Ensembl:
ENSGMOG00000005751
LinkDB
All DBs
Position
10:complement(18618431..18632258)
Genome browser
AA seq
1564 aa
AA seq
DB search
MAEECNTDDALQKKVNCTACGQQVNQFQRNSVLEHPVLKVLICKSCYKFYRSDDISKDSD
GMDEQCRWCAEGGKLICCDFCNNAFCKKCILRNLGRKELSVITNENSKWHCYVCTSEPLS
DLSSKCQRIMEKLETVWNKERRPEKSQERDGKQHRGKEAKKHKAVNGKEHGEDSGTMTFC
YKKLHVSKELVKKAKKLVETTAGLNNTFIQFIQQASEKQGDNSIRYRHLNAFKSVLSDLK
KAHTALEDALEPEFKNMELQNGDEGLHVHRKSVEDADTELVDDIAAAAEPEEEEGDNKEE
EEVEDGDEDSDRSPDAEPKGVDTGTAKANVTAQSDDEEDDDDDDMPMDEMSLDHDIVSVP
PSVPEELFQMVESLADSSMLSQTDDAANDGAGEDTAAVSKEKVANSQRHQPKVKNLIVKL
TPVPVVTTCSSRSSRSSRSRSKSKSKDKEVETPKKSKKNKKEGKKNEVEDDVEKEEDDVE
KEDDVEKEEDEVEKEEDEVEKEEEQAVEEDGEEEDEAEEEEKDSGSEVKQRNGTPTDCVP
SKRRSSRTKTTPLRKQAEIKAKEDSSETEGQNRDKADKAGKSSSTKTKNGKRTKTSSPED
KGEESDSDSVPDILLQKVAEEHSSAEGGVTKSAKKCLFKQKEKEKPSKRKRKSDTSDSDP
PEQGKSKSSVASKKSSKKKKHSGSEDSEPEKATKRRSSRTKKKEEVKKSPDAKARDLKRS
YEKKRTARKAKGASKSSSSDEEDGDEGAIGGEDSGEDSDQQRIKPLVEDNVATASGNFHQ
SSGDEDGNKDGSHPGEDDDDAENRIAKKMLLAQIKSNYSSGDDSSSDGEGGDNEDKKSKK
VKKEKKDDDEEEEEDGDEDQEDNDDDDYEEDSQQGSASDGDTKKGRRHALLRHKLTLSEG
ESADEKSGGKGKKSKDPKKRSWRKVGSDDSDSEFEKSGSASDDESVMSEELSGSEEDGKR
RKTRSSNKKDVEKRSSKQKQKKKRRRIKVQDSSSSNDKSGDDEDGDDEDGDDKDTPKGRK
RIRKILKDDKLRTETRDALKEEEDRRQRIAEREMLREKMIETAEIKEASQMDCPITLKMV
LDEDEETKEPMVQVHKKLVTKLKPHQVEGVQFIWDCCCESMKKTEKSSGSGCILAHCMGL
GRPCSAVLRLALQVVTFLHTMLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQHGMKDEES
LEVTELATVKRPQERAYALQRWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVD
PGPDFVICDEGHILKNEASAVSRAMNSIKTRRRVILTGTPLQNNLIEYHCMVNFIKENLL
GSVKEFRNRFINPIQNGQCADSTEQDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPK
HEYVLAVRVTPIQCKLYRYYLENFTGVGNANEGGKGRAGTKLFQDFQMLSRIWTHPWCLQ
LDYISKENKGYFDEDSMEEFIASETEESSMSMTSEDDKKKKKKGKGKKKKGSDDSDSEDL
EVIKEWNTSSRGGDPAGRNRAEPVEEARPSASGPGSPSPDWHKEFVTEPVCPASRSAHQR
RSSD
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagtgcaacacagatgatgccttgcagaagaaggtcaactgcacagcgtgc
gggcagcaagttaatcagttccaacgtaactctgttcttgagcatcctgtgctcaaagtg
cttatttgcaagtcgtgttacaagttttacagaagtgatgacatcagcaaagactcggac
ggaatggatgagcagtgcaggtggtgtgctgaagggggcaaactgatttgctgcgacttt
tgcaacaacgccttctgcaagaagtgcattctgcgcaacctgggacggaaggagctgtcc
gtcatcaccaatgagaactcaaagtggcactgctacgtgtgcacctctgagccactctct
gacttatcctccaaatgccagcgcatcatggagaagttagaaacggtgtggaacaaggag
cgtagaccagagaagagtcaggagcgcgacggcaagcagcacagagggaaagaggcgaaa
aaacacaaagccgtcaacggaaaggagcacggcgaggactctgggaccatgaccttctgc
tacaaaaagctgcacgtttccaaagagctcgtcaaaaaggccaagaagctggtggagacg
acggcgggcctcaacaacacgttcattcagttcatccagcaggcgagcgagaagcaaggg
gacaactccatcaggtatagacacttgaacgcgttcaaatcggtgctcagcgatttgaag
aaagcccatactgccctggaggacgcgttggagcccgagttcaagaacatggagttgcaa
aacggcgacgaggggttacacgttcacaggaaaagcgtggaggatgcagacacggaactc
gtggacgatatcgctgccgcggcggagccagaggaggaagagggggacaacaaggaggag
gaggaggtggaggacggtgatgaggacagcgatcgatcccctgatgctgagccaaaggga
gtggacacgggaaccgccaaggccaacgtcacggcgcagtccgacgacgaggaagacgac
gacgacgacgacatgcctatggatgagatgtccctggaccacgacatcgtctcggttccc
ccgtcggttcccgaggagctcttccagatggtggagagcctcgctgactcctccatgctc
tcgcagacagacgacgcggccaacgacggggccggcgaagacacggccgccgtgtccaag
gagaaggtggcgaactcccagcgacaccagcccaaggtgaagaacctcatcgtcaaactc
acccccgtgccggtggtgacgacgtgcagctccagatcctccaggtcctcaagatccagg
tccaagagcaagagcaaggacaaggaggttgaaaccccaaagaagagcaagaagaataag
aaggaagggaagaagaacgaggttgaggatgacgtggaaaaagaggaggatgacgtggaa
aaagaggatgacgtggaaaaagaggaggatgaagtagaaaaagaggaggatgaagtggaa
aaagaggaagaacaggcggtagaagaggatggtgaggaggaggatgaggcagaggaggag
gagaaggactcgggttctgaggtgaaacagaggaatggaactccaactgattgcgtcccc
agtaagcgtcgctctagccggacaaagaccacaccactcaggaagcaggcggagatcaag
gccaaggaggactcctcagagacagaaggtcagaaccgggacaaggctgacaaggccgga
aagtccagcagcaccaagaccaaaaacggaaaacggaccaagacctcttcgcccgaggac
aaaggggaggagtctgactcagactccgtgcccgacatactgctgcagaaggtggcggaa
gagcacagttccgctgaagggggggtcacgaagagtgccaagaagtgcttgtttaagcag
aaggagaaggaaaagccgagcaagcgcaagaggaagtcggacacctccgactctgacccg
ccggagcagggcaaaagtaaatcttcagtggcatccaagaagtcctcaaagaagaagaag
cacagcggctcagaggactctgagccggagaaggccaccaagagaaggtcaagccggacg
aagaagaaggaagaggtcaagaagtctcccgacgccaaggccagggatctgaaaaggtcc
tacgaaaagaagcgaacggcgaggaaggctaaaggggcgtctaagtcgtcctccagcgac
gaggaggatggggacgaaggggccatcggtggggaggactccggagaagacagcgaccag
cagaggatcaagcctcttgtggaggacaacgtcgccacagcaagcggcaacttccatcag
tcctcaggggatgaagatggcaataaagacggctctcatcctggtgaagacgatgacgac
gctgaaaaccgaattgcaaagaaaatgcttctggcacaaataaagtccaactactcgtct
ggtgacgacagttcctcagacggtgaagggggagataacgaagacaagaaatccaagaaa
gtaaagaaagagaaaaaagacgatgacgaggaggaggaagaagacggagatgaagatcag
gaagacaacgacgatgacgactacgaggaggactcccagcaaggctccgcctcggacgga
gacacgaaaaaggggcggcgccacgccttgctgcgccacaaactcactctgagcgaagga
gagtcggcggacgagaagtctggtggcaagggcaagaagagcaaggaccccaagaaacga
tcatggcggaaagtcggcagtgacgactcggactctgagttcgagaagtccggatccgcc
agcgacgatgagtctgtgatgagcgaggagttgagcgggtcagaagaggacggcaaacgc
agaaagaccaggtcgtccaataagaaagacgtggagaaacggagctccaagcagaaacag
aagaagaagaggcgcagaattaaagtgcaggattcctcctccagcaacgacaagagcggt
gacgatgaagacggggacgacgaagacggagacgataaggacacgcccaagggccgcaag
aggatccgcaagatcctgaaggacgacaagctccgcacggagacccgggacgctctgaaa
gaggaggaggaccggcgacagcgtatcgcggagagggagatgctgagggaaaaaatgata
gagacggcggagataaaggaggccagtcagatggactgtcccatcaccctgaagatggtg
ctggatgaggatgaagagacaaaggagcccatggtgcaggtgcacaagaagctggtcacc
aagctgaagccgcatcaggtcgaaggtgtgcagttcatttgggactgctgctgcgagtcg
atgaagaagactgagaagtcatccggctctgggtgcatcctggcccactgcatgggcctg
ggaagaccctgcagtgcagttctgcgtttggccctgcaggtggtgacgttcctccacact
atgctgctctgtgagaagctcaacttctccacggccctggtggtctgcccgctgaacacg
gtcctcaactggctcaacgagtttgaaaagtggcagcacgggatgaaggacgaggagagc
ttggaggtgacggagctggccacggtgaagaggccccaggagcgtgcctacgccctacag
cggtggcaggaggatgggggcatcatgatcatcggctacgagatgtacaggaacctcacc
cagggacggaacatcaagagcaagaagctcaaggagaccttccagaagactcttgtggat
cccggtccggactttgtgatctgtgacgagggccacatcctcaagaacgaggcgtctgcc
gtgtccagggccatgaactccatcaagacccgccggagggtcatcttgaccggaacgccg
ctgcagaacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctgctg
ggctccgtgaaggagttcaggaaccgattcatcaaccccatccagaacggccagtgtgcc
gactccactgagcaggacgtgcgcgtcatgaagaagagggcccacatcctctacgagatg
ctggccggctgcgttcagagaaaggactacacggcactgaccaaattcctacctccaaag
catgagtatgtgctcgctgtgagggtgacgcccattcagtgtaaactttatcggtactac
ctggagaactttacaggtgttggcaacgccaacgaggggggcaagggacgcgctgggacc
aaactcttccaggacttccagatgctgagcagaatctggacccatccctggtgccttcag
ctcgactacatcagcaaagagaacaagggatactttgacgaggacagcatggaggagttc
atcgcctcggagaccgaggagtcctccatgagcatgacctcggaagacgacaagaaaaag
aaaaagaagggcaaggggaagaagaagaagggctcggacgactcggacagcgaagacctg
gaagtgattaaggagtggaacaccagctcccggggaggggacccggcggggaggaaccga
gcagagcccgtggaagaagcccggccctccgcatcgggcccagggagcccgtctcccgac
tggcacaaggagtttgtcaccgagcccgtctgccctgcatcccggtctgcgcatcaaagg
cgctcctcagactga
DBGET
integrated database retrieval system