Gadus morhua (Atlantic cod): 115552083
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Entry
115552083 CDS
T10832
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115552083 (rnf4)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115552083 (rnf4)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115552083 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf-C3HC4_4
Rtf2
zf-RING_11
zf_RING_Vps8
zf-RING_6
IBR_1
RING_XB3-XBAT31
zf-Nse
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115552083
NCBI-ProteinID:
XP_030223701
LinkDB
All DBs
Position
10:complement(11158132..11168449)
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AA seq
228 aa
AA seq
DB search
MDVDASGIMSRPIPKRRKATCPQCSGCSAKNSRTANTRSASCNPNTSRDSNSSGDTISSD
SSTSSSSLLPVLPFTITETINVLEHMLAGEEDVVDLTCEGTEPAAVVDLTNNDSVVLLDE
GPEGTEGTAESYVVSSDEEEEDARTLLNADLLSTLQASSQARATPGTISCPVCMDSYTEI
VDTGRLVVSTKCGHVFCSQCIRDSLAHSHTCPTCRKKLTPQQYHPIYI
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggacgcttcgggaatcatgagcagacctattccaaagagaagaaaggcaaca
tgcccacagtgctctggatgcagcgcaaagaacagcagaaccgccaacaccaggtctgct
agctgcaacccgaacaccagtagagactcaaactccagcggagataccatcagcagcgat
tctagtactagctcttcaagcctgttgcctgttctgcctttcacaatcacagaaaccatc
aacgtattggaacacatgttagccggggaagaggacgtagtagatcttacgtgtgaagga
accgagccggcggccgtagtcgatctcaccaacaacgactcggttgtgctgttggatgaa
ggtcctgagggcacagagggaactgcagagagctacgtggtcagcagtgacgaggaggag
gaggatgcgcggaccctgctcaatgcggatctgctgtccacgttgcaggccagcagtcaa
gccagggcgactccagggaccatcagctgtccagtgtgtatggactcgtacacagagatc
gtggacaccggcaggctggtggtctctaccaagtgcggccatgtcttttgcagccagtgc
atccgggactcgctggcccactcgcatacttgcccaacctgcaggaaaaaactgacgcct
caacagtaccaccccatctacatctga
DBGET
integrated database retrieval system
