Gadus morhua (Atlantic cod): 115552121
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Entry
115552121 CDS
T10832
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A
KO
K20165
TBC1 domain family member 2A
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115552121 (tbc1d2)
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115552121 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
PH_alsin
ZapB
Motif
Other DBs
NCBI-GeneID:
115552121
NCBI-ProteinID:
XP_030223759
Ensembl:
ENSGMOG00000012669
LinkDB
All DBs
Position
10:1455298..1477700
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AA seq
1121 aa
AA seq
DB search
MEGTGSPIAALFQSLPLQEEAAGEEGGGAGESPAPLASPEDETTSSSFSSSSDVDQPLRT
EPPVPPEPPPDRADSPCRTQPPAPPPCPSAGPRDPPRPQEAPTGPRDPPRPQEAPAGPRD
PPRPQEPPAGSSAAERRPEEGDPVRLPPPLPSDTGGQAPGPPSLEDQEPRRHHPPPAPPT
LAPPVAAEALSGGLEGGEPCAPARPAPGTKLCGYLAKRGGPLRAWKRRWFMYEEKKSQLF
YYRTAQDLTPLGRVGLGSATFTLPLKGEEGCFHIQTPERTYILKAVNQAAMMYWLQQLQM
RRWQYREFLSGGALSQPASSDTTNNNNNVSAGSPEDFLPMVKSPQGLVGEEAANQPPQPR
TGGLANMSLKHPFIEIQNSVHNLLAKRSSQEYSQSVFHVESAPPWTPPSQLAGTSPTTLQ
TPPIFPTPGTPTTPTTPSTPSSPITPLLPSTGPSGQRPPEGDRKPPAGLNTQNSRRSKSR
GTVSNIRRETSSADRMSRLQQDKDMLGEEVKSQKELVWLLHKALEASQLEKRTCTEFLAA
EGEQQRLEVLRHRERQAADLRRRLDDLTAQTEGLRRSLAEKESQVVDLQENIDLLTEKNQ
AKQEVILKISDQLSTCMANPQRKVSTSIGLQAQTCSLLQEENENLKDDIAAYKTQNKFLN
SEIYQLTKLWRKSSEQEKSLMVKCAYLEASGCQKESRYLGVLQRLQETQGLDAAQKGVVR
GLVEDALQGDPAGSLQKAALGGPPLDHDDYGFKILPDYEVEDIKLLAKIQALEIRSHNLL
YQDAGDRPLLGRWSQFLASRSDGDFGQSPELKNLLRAGVPREFRQRVWRWIVRARTLTLR
EQHPHRYQQLCEKSLTSPHPASRQILLDLHRTLTTNKHFSAPSSPALQKLQRILLAFSWQ
NPTIGYCQGLNRLAAVSLLVLQDEEDAFWCLVAVVEVIMPLDYYTKNLVASQADQRVLKD
FMAEKLPRLAAHLEEHAVDVSLVTFNWFLVCFVESLPSDLLLRVWDAFLYEGTKVLFRYA
LALFKYKEEDILKIHDNVEIYQYLRFFTKTVTDGRKLTSIAFTMMNPFPGRILRNRRAAH
LERLQGEMRELEEQQKEFISECPVQKDKDLDTLLSEDEEEP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacaggaagtcccatcgctgccttgtttcagtcacttcctctccaggaggag
gcggccggggaggaaggaggaggcgctggtgagagtccggcgcccctcgcctcccctgaa
gacgagaccacctcctcctccttctcctcctcctccgacgtggaccagcccctccgcacc
gagccccccgtccccccggagccgccgccagaccgggccgactccccctgtcgcacacag
cccccagctcctccaccgtgtccctccgccgggccccgagaccccccccgaccgcaggag
gcccccaccgggccccgagaccccccccgaccgcaggaggcccccgccgggccccgagac
cccccccgaccgcaggagccccccgccggctcctccgctgccgagcgccgcccggaggag
ggggaccccgtccggctgccgcctccgcttccctcggacaccgggggccaggccccgggg
cccccctccctggaggaccaggagccccgccggcaccaccccccccctgcacccccgacc
ctggctccccctgtggcggcggaggcgctcagcgggggcctggagggcggcgagccgtgc
gcccccgcccggccggccccggggaccaagctctgcggctacctggccaagcggggcggg
cccctgagggcctggaagcggcggtggttcatgtacgaggagaagaagagccagctgttc
tactaccgcacggcccaggacctgacccccctggggagggtggggctgggcagcgccacc
ttcaccctccccctgaagggggaggagggctgcttccacatccagacccccgagcgcaca
tacatactcaaggcagttaaccaggcggccatgatgtactggcttcagcagctccagatg
aggaggtggcagtacagggagtttctgtctgggggggcgctgtcccaaccagcctcttca
gacaccaccaacaacaacaacaacgtcagcgccggcagtccggaggacttcctgcccatg
gtgaagagcccgcagggcctggtgggagaggaggccgccaaccagcccccccaaccccgc
accgggggtctggccaacatgtccctcaaacacccgttcatagagatccagaactcagtc
cacaacctgctagctaaacgctcatctcaggagtacagccagagtgttttccatgttgaa
tcggctccaccatggacaccgcccagccagttagccggcacgtcccccactactctgcag
actccgcccattttcccaaccccgggcactcccactactcccactactcccagcactccc
agctcccccatcacccctttgctcccatcgacggggccgtcagggcagcgccccccagag
ggcgacaggaagcccccggccgggttgaatacccagaattctcggaggagcaagagccgc
ggcaccgtgtccaacatccgcagggagacttcctctgcagacaggatgtcccgcctccag
caggacaaagacatgctgggggaggaggtgaagtctcagaaggagctggtgtggctgctc
cacaaggccctggaggcctcccagctggagaagcggacgtgcacggagttcctggcggcc
gagggcgagcagcagcgtctggaggtgctgcggcaccgcgagcggcaggccgccgacctg
cggcgccgcctggacgacctcacggcccagacggagggcctgaggcgcagcctggccgag
aaggagtcccaggtggtcgatctccaggagaacatcgacctgttgacggagaagaaccaa
gccaagcaggaggtgatcctgaagatctctgaccagttgtctacatgtatggccaaccca
caacgcaaggtctcaacctccatcggtctacaggcgcagacctgcagtctgcttcaggaa
gaaaacgagaacctgaaggatgacatcgccgcctacaagactcagaacaagttcctgaac
tctgagatctaccagctgaccaagctgtggaggaagagctcggagcaggagaagagcctg
atggtcaagtgtgcctacctggaggccagcggctgccagaaggagagccgctacttgggg
gtcctgcagcgcctgcaggagacccagggcctggacgcggcccagaagggcgtggtgcgc
ggcctggtggaggacgctctgcagggagacccggccggcagcctccaaaaggcagcgctg
ggtggccctccgttagaccacgacgactatggtttcaagattcttccggactacgaggtg
gaagacataaagctgctagctaaaatccaagcgctggagatacgctcccacaacctgctg
taccaggacgctggggacagaccactgcttggtcgctggtcccaatttctcgccagtcgc
tctgacggcgacttcggccagtcgccggagctgaagaacctgctgagggcgggggtcccc
cgggagttccgccagagggtctggcgctggatcgtacgcgccagaactctcaccctacgc
gagcaacacccacaccgctaccaacagctgtgtgagaagagcctgacatcgccccaccca
gcgtccagacagatcctcctggacctccaccggaccctcaccaccaataagcacttctcc
gccccctctagccccgccctccagaaactccaacgcatcttattggccttctcttggcag
aaccctacgattggctactgccagggactcaacaggctggcagccgtcagcctgctggtg
ctgcaggacgaggaggacgccttctggtgtctggtggcggtggtggaggtcatcatgccc
ctggactactacaccaagaacctggtggcctcgcaggcggaccagcgggtgctgaaggac
ttcatggcagagaagctgccccggctggcggcccacctcgaggagcacgccgtggacgtg
tccctcgtcaccttcaactggttcctggtgtgcttcgtggagagcctccccagcgacctg
ctgctgagggtctgggacgccttcctctacgagggcaccaaggtgctatttcgctatgcg
ttggcgctcttcaaatacaaagaggaggacattctaaagatccatgacaacgttgagatc
taccaataccttcgcttcttcaccaagaccgtgactgacgggaggaagctcacgagcatc
gccttcaccatgatgaacccgttcccgggcagaatactacgcaaccgacgtgcagcgcac
ctggagcgcctgcagggggagatgcgggagctggaggagcagcagaaagagttcatctcg
gagtgtcctgtgcaaaaggacaaggacctggacaccttgctgagcgaggatgaggaggag
ccttga
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integrated database retrieval system
