Gadus morhua (Atlantic cod): 115552229
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Entry
115552229 CDS
T10832
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03020
RNA polymerase
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115552229 (polr1a)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115552229 (polr1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115552229
NCBI-ProteinID:
XP_030223980
Ensembl:
ENSGMOG00000002230
LinkDB
All DBs
Position
10:4836045..4872744
Genome browser
AA seq
1697 aa
AA seq
DB search
MLLRSDVPWRRLDSLSFGLYSAEEIRKLSVKAITNLVFFDNLGNVSVNGLYDLSMGPSDN
KEVCATCSQNSQTCPGHFGHVDLPLPVYNPMLFDTLFLLVRGSCLRCHMLTCPRSAIHLL
LSQLKLLDHGFGAEVCEVEQVLNQLLDRNIKASGMDIQETLDEHTKAVIGTKADDTKQSQ
QIKHTVERRRCLIERFWKVFMNGRRCPNCNYGKFTVRREYNSKLIVTMPSTPLDQENGEE
DLMAGKKGYMTPVIAKEHLVKLWEKEGFFLRNLFLGLDHGPELELQAEFNPELFFLDILV
TPPCRYRPLNRLGDRLFTNGQTVNLQLVLKQCRIIQQILTLMAGEKEEKGADPALGDVTA
VEVEEKARDLALLEGVQGQTLTEKLYSIWIRLQTYVNIVFDSELDKITQEKFPGIKQLLE
KKDGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGLPMVFATKLTYPQPVTPWNVKELRQ
AVLNGPDVHPGALAVINEDGSKTILSPSDATQREAVAKQLLTPCPGRQKMAMKIVNRHIK
NGDVMLLNRQPTLHRPSIQSHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSEL
ARAEAYTLISTDQQYLVPKDGKPLAGLIQDHMVSGTRMTLRGCFFTRDHYTALVYRGLTD
RWGRVRLLPPTVLKPQQLWTGKQVVSTLLLNIIPEKALPLNLNGTAKIPSKSWIQVPPRA
VPGYDPDSMCDSTVVIRQGELLRGVLDKAHYGSSIYGLVHCCYELYGGETGGRLLTCLAR
LFTAYLQLYKGFTLSVEDILVKPGANRQRKKLIKESQKIGTRALQMAFNLPENVDPAEAR
GRWQDAHLNPDQRDFNLADMKFKEVANQVNNGINKVCMPAGLHRSFPDNNLQLMVQSGAK
GSSVNTMQISCLLGQIELEGRRPPLMPSGKSLPCYQPYEPSPAAGGFISGRFLTGIRPQE
FFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDG
LDVPKIQFLQSSQFPFIEENYQVIKKSQDLDQLLSRFDPTAARQHFSAVKRWKAKRLDSS
PRNGGFLLFSQKKLAKQRQSEGGQGSQICGREAATIQLMERWRSLEAGNQLKYRRKSSRC
PEPSLGTFRPDLCFGAVSESFHEVMEKYIQATPRRCGLDSDSLRHLLNYKWQRSLCDPGE
AVGLVAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILLVATSRIKTPMMSVPVL
GHMSAQRKANSLRKKLTRVCLAEVLQRVEVTEKLRIKSTTEKMQVFNVEFHFLPAERYQE
DKILTPHQILRFMETRFFFLMLEAIKKRSLKLASIAVETRKATSKDQDGAAGVAGGDDGD
GEGEEPEAPIVDDRENEGDTDATDVKRQEKQKEEVDYDSEEDEGDPEDKPEGEVEKEDGD
GDDDDEEEDGGAEEAQEGSGLEPTPKNKRGRSTMDPTRVTSVLASQQAIESYSYDAKHSL
WCQVTIALPLTNVHFDLTSLLSTLAHSAVIMQTPGITRCLLNEATGRTGQKESLLNTEGI
NMHELFKYSDILDLNRLYSNEVHAMANTYGIEVALRVIEKEIRDVFAVYGIEVDPRHLSL
VADYMCFEGVYKPFNRFAIRSNSSPLQQMTFETSYKFLKDATLMGAHDELQSPSACLITG
KVVRGGTGLFELKQPLQ
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcggagcgacgtgccgtggaggcggctggacagcctctccttcggcctgtac
agcgccgaggagatacggaagctgagtgtgaaggcgatcactaacttggtgttcttcgac
aatcttggaaatgtctcagtcaacggtctctatgatctgtccatggggccttcagacaat
aaagaggtgtgtgccacctgcagtcagaactcacagacttgccccggacactttgggcat
gtagacctaccactacctgtctacaaccccatgttgtttgataccctgttcctactggtg
cggggatcctgcctgcgttgtcacatgctcacctgcccccggagcgccatccacctgctg
ctgagccagctcaagctactggaccacggcttcggggcggaggtctgcgaggtggaacaa
gtcctcaaccagctccttgaccgtaatatcaaggcctctgggatggacatccaagagaca
ctggatgaacacacaaaggcggtcatcggtaccaaagctgatgatacaaaacagagccaa
cagattaaacacacagtggaaaggaggcgctgtcttattgagcgattttggaaagtcttc
atgaatggccgtagatgtccaaactgcaactacgggaagttcaccgtgcgccgggaatac
aactccaagctgatcgtgacgatgccgtcgacgcccctggatcaggagaacggagaggag
gacctcatggctgggaagaagggctacatgacccctgtgatcgccaaggagcatctcgtc
aagctatgggagaaggaaggtttcttcctgaggaatctgtttctgggtctggaccacggg
cctgagctggagctacaggctgaattcaaccctgaacttttcttcctggacatcttggtg
actcctccttgcaggtacaggccgctgaatcgcctgggcgaccgcctcttcaccaacggg
cagacggtgaacctgcagctggtcctgaagcagtgcaggatcatccagcagatcctcacc
ctcatggcgggggaaaaagaggaaaagggggcagacccggcgctgggggatgtcacggcg
gtggaggtggaggaaaaggcccgcgacctggccctcctggagggggtccagggtcagacc
ctgacggagaagctgtacagcatttggatccggttgcagacctacgtcaacatcgtgttc
gacagcgagctggacaagatcacccaggagaagttccctgggatcaaacagctcctggag
aagaaggatggacttttccggaagcacatgatgggcaagcgagtggatttcgcggcacgg
tcggtcatctgtcccgacatgtacatcgggaccaacgagatcggactaccgatggtgttc
gccacgaagctcacctaccctcagcccgtcacgccctggaacgtgaaggagctgcggcag
gcggtgctcaacgggccagacgtgcaccccggcgccctggccgtcatcaacgaggacggc
agcaagaccatcctgtccccctcggacgccacgcagcgcgaggccgtggccaagcagctg
ctgactccctgccccggccgccaaaagatggccatgaagatcgtgaaccgccacataaag
aacggggacgtcatgctgctgaaccgccagcccacgctgcacaggccctccatccagtcg
caccgtgcccgcatcctgcccggggagaaggtgctcaggctccactacgccaactgcaaa
gcctacaacgccgatttcgacggcgacgagatgaacgcccacttcccccagagtgagctg
gcccgcgcagaggcctacacactgatcagcacagaccaacagtacctggtgcccaaggac
ggtaagcccttggcggggctgatccaggaccacatggtctccggcaccaggatgacgctg
cgcggctgcttcttcacccgggaccactacacggccctggtgtaccggggcctgacggac
cgctggggccgcgtccggctgctgccgcccaccgtcctcaagccccagcagctgtggacc
gggaagcaggtggtgtctaccctgctgctgaacatcataccagagaaagccctgccgcta
aacctgaacggcacggccaagatccccagcaagtcctggatccaagtcccgccccgagcg
gtaccaggatacgaccccgacagcatgtgtgactcaacggtggtgatccgccagggcgag
ttgctgaggggcgtgctggacaaggcccactacggctcgtccatctacggcctggtgcac
tgctgctacgagctgtacggcggcgagacgggcggccgcctgctcacctgcctggcccgc
ctcttcaccgcatacctgcagctgtacaagggcttcactctgagtgtggaggacattttg
gtgaagccaggggccaaccgacagcggaaaaagctcatcaaagagtctcaaaagatcggc
accagggccctgcagatggccttcaacctgcccgagaacgtggaccctgcggaggccagg
ggccggtggcaggacgctcacctcaaccccgaccagagggacttcaacctggccgacatg
aagttcaaggaagtggccaaccaagtgaacaatggcatcaacaaggtctgtatgccagct
gggctccacaggtcctttcccgacaacaacctccagctgatggtccagtctggagccaag
ggctcctcggtcaacaccatgcagatttcatgcctcctgggccagattgagttggagggg
cgtcggcctcccctgatgccttctgggaagtcgttgccgtgctaccagccctacgagccg
tcgccggccgcggggggattcatctccggaaggttcctcactggcatcagaccgcaggag
ttcttctttcactgcatggctggcagagaggggctagttgacaccgcagtcaaaacctcc
agatcaggatatctgcaacggtgcatcatcaagcacttggaggggctggtggtgcagtac
gacctcacggtgagggacagcgacggctccgtggtgcagttcctctacggggaggacggc
ctggacgtccctaagatccagttcctccagtcctcccagttccccttcatagaggagaac
taccaggtgatcaagaagtcccaggacctggaccagttgttgtcccggttcgaccccacg
gccgcccgccaacacttctccgccgtgaagcgctggaaggccaagcgcctggactcctct
ccacgtaacggagggttcctcctgttctcccagaagaagctggcaaagcaaaggcagtcg
gagggtggccagggaagccagatctgcggccgagaagctgccaccatccagctgatggag
cgctggcgatccctggaggcgggcaaccagctcaagtaccgccgcaagtcgtcccgctgc
ccagagcccagcctggggaccttccggcccgacctctgcttcggggccgtgtcggagagc
ttccacgaggtcatggagaagtacatccaggccacgccccgccgctgcggcctggactcc
gacagcctccgccacctcctgaactacaagtggcagcggtccctgtgtgacccgggcgag
gcggtggggctggtggccgcgcagtccatcggcgagccctccacccagatgacgctcaac
accttccacttcgccggcagaggagagatgaacgtcacactgggtatacccaggctcaga
gagatcctgctggtggccacgtcccggatcaagacgcccatgatgagcgttcctgtgctg
ggccacatgtcggctcagagaaaggccaacagcctccgcaagaagctcaccagggtgtgt
ctggccgaggtcttgcagcgagtggaggtcacagagaaactgaggatcaagagcaccact
gagaagatgcaggtgttcaatgttgagtttcacttcctgccggcagaacgctaccaagag
gataagattctgacgcctcatcagatactgcgcttcatggaaaccaggtttttcttcctc
atgctggaagccatcaagaagcgctcgctgaagttggcctccatcgccgtggagaccagg
aaggccacgtcgaaggaccaggacggagctgccggagtggcgggaggcgatgacggagac
ggagagggggaggagccggaggcgcccatcgtagacgaccgggagaacgaaggggacacc
gacgccacggacgtaaagcggcaggagaagcagaaagaagaggttgactatgacagtgag
gaagacgagggggatccagaggacaagccagaaggggaggtggaaaaggaggatggtgat
ggtgatgatgatgatgaggaggaagacggcggtgcagaagaggcacaggaaggaagtggc
ctcgaaccgacgcccaaaaataagaggggacgcagcaccatggaccccacgcgggtgacc
tcggtgctggcctcccaacaagccatcgagagctactcctacgacgcgaagcacagcctc
tggtgtcaggtgaccatcgccctcccgctgaccaacgtgcactttgacctgacgtcgctg
ctgtccacgctggcccacagcgccgtcatcatgcagacgcccggcatcacgcgctgcctg
ctgaacgaggccacgggccgcacggggcagaaggagagcctgctgaacacggagggcatc
aacatgcacgagctcttcaagtacagcgacatccttgacctcaaccgcctgtactctaac
gaggtgcacgccatggccaacacctacggaatagaagtggctctgagggtcatcgagaag
gagatcagggacgtctttgccgtctacggcatcgaggtggaccccaggcacctgtcgctg
gtggccgactacatgtgctttgagggcgtatacaaacccttcaaccggttcgccatccgc
tccaactcgtccccgctacagcagatgaccttcgagaccagctacaagttcctcaaagac
gccactctgatgggtgctcacgacgagctgcagtcgccctccgcttgtctgatcactggc
aaggtggtgaggggaggaacggggctgtttgagctgaagcagcccctgcagtga
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integrated database retrieval system
