Gadus morhua (Atlantic cod): 115552246
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Entry
115552246 CDS
T10832
Name
(RefSeq) type III intermediate filament-like
KO
K05640
glial fibrillary acidic protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115552246
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115552246
Membrane trafficking [BR:
gmh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115552246
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
115552246
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Gene cluster
GFIT
Motif
Pfam:
Filament
ATG16
Prp19
Tmemb_cc2
PP_kinase
Cep57_MT_bd
BAR_2
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
115552246
NCBI-ProteinID:
XP_030224015
LinkDB
All DBs
Position
10:18872321..18886856
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AA seq
407 aa
AA seq
DB search
MNREPFVRPSLRLRTMAMLRVSSYRRLFEEQCWRQNGASVVSRRSPGRVGAADECQCDKY
DFASAKALNKEGLVRFTQDHTVLSGLNNRLVRLIELARCFEEENEFLESQILDLEESGPS
AGVSGTGGAVADCSLDAVVERLRRERDDILCDTVELQKELQCLRQEFEKALQQRTSVQHA
RLDLAEEVDAVTAECLALREQAEIYEQQLVCMEAQRSTAVQCHESQGPQGPPPLGTPESG
ARLEFCSPDITPGLQIKAYYGQLAESLQCECGKSSPSSSLVPSHDPLREEGVSGPPRSKG
KDSPKMADSGELKELVGQLQKELAELQKVSVELEDEVEVNGDAHQERIEELECTLEDMRA
QQLDFEDQIQDQCEDYQELLCEKRTRDLEIAAYRGLVAEEDDRLCHL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgagccatttgtgcgtccatcgctgcgtctgagaaccatggccatgctgcga
gtgtcatcctaccgaaggttgtttgaggagcagtgctggagacagaacggagcgtcggtg
gtgtcgaggcgcagccctggcagggttggagcggctgacgaatgccaatgcgacaagtat
gactttgcatctgccaaggcgctcaacaaggaaggcctggtccgattcacccaggaccac
accgtcctctccggcctaaacaaccgcctggtccggctgattgaactggctcgttgcttt
gaggaggagaatgagttcctggagagccagatcctggatctggaggagagcgggccctct
gcgggagtctctggcaccgggggggctgtggctgactgcagcctggacgcggtggtggag
aggctgcgcagagagagggatgacatcttgtgtgacacggtggagctgcagaaggaactg
caatgtctgaggcaagagtttgagaaggctctgcagcagaggaccagcgtccagcacgca
agactcgacctcgctgaggaggtggatgcggtgacagccgagtgcctcgcactcagggag
caagctgagatctacgagcagcagctagtctgcatggaggcccagcgcagcacggcggtg
caatgccacgagtcccagggcccccagggccccccccctcttgggacccccgaatccggg
gcgcgactggagttctgcagcccagacattacgcccggcctgcagatcaaagcgtactac
ggccaactggcagagagcctgcagtgcgagtgcggaaaatcctccccttcttcttctttg
gtgccgtcccacgatcctctgcgagaagagggcgtgtctggacccccgaggtcaaagggc
aaagactccccaaagatggccgactccggagagctgaaagagctggtgggccagctgcag
aaggagctggccgagcttcagaaggtcagcgtggagctggaggatgaggtggaggtgaac
ggagacgctcaccaggagcggattgaggagctggagtgcaccttggaggatatgagggct
cagcagcttgattttgaagaccaaatccaggatcagtgtgaggactaccaggagttgctg
tgcgagaagaggaccagagaccttgagatcgcggcctacaggggtctcgtcgcggaggag
gacgacaggctttgtcacctgtaa
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