Gadus morhua (Atlantic cod): 115552279
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Entry
115552279 CDS
T10832
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
gmh04141
Protein processing in endoplasmic reticulum
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115552279 (syvn1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115552279 (syvn1)
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Ortholog
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Gene cluster
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Other DBs
NCBI-GeneID:
115552279
NCBI-ProteinID:
XP_030224073
Ensembl:
ENSGMOG00000005799
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Position
10:complement(5862880..5878138)
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AA seq
635 aa
AA seq
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MASIMVRAVLVTATSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFL
LGKFMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCF
HWLAEDRVDFMERSPNISWVFHFRVLSLMGLLGVLDFLFVNHACHSIITRGASVQLVFGF
EYAILMTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIK
VHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPADLLASDNVCIICRE
EMVTGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNANQTPATPQAPPPAPAAA
PNAPAAPPPNVAMGMLPGFPPPGMFPFWGPFPGAPPPGAAPANGPAADTPQGNGEAPQAA
GSSWPPPTTDPSAAPLGQPNPGFGFPFAPPPFPSTPWLPPPPPMPFVSSMPPPPPSLSAL
SDEELGELEAEGRRGLEARLQCLHNIHTLLDAAMLNIHQYLSTVATLTPPRTGTRSAARS
DPSPPAGAEAPGPEESTSSSESAGGATGFTQPADSTTAASASGSEEPEEREPSVDGEEVE
EEVAEGGAEPSASELRRRRLRKLETSSSTQAPPDN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcatggtgcgagcagtcctggtgacggccaccagcctggtgctgactggg
gctgtggtggcccatgcctacttcctcaagcaccagttctatccaacggtggtctacctt
acaaaaagcagccccagcatggcggtcttgtacatacaagcctttgtgctggtgtttctg
ctggggaagttcatgaggaaggtgttcttcggccagctgagggctgcagagatggagcac
ctgattgagcgctcgtggtacgccgtgacggagacctgcctggccttcaccgtgttcagg
gacgacttctccccgcgcttcgtggccctcttcacgctgctgctcttcctcaagtgcttc
cactggctggccgaggaccgcgtggactttatggagaggagtcccaacatatcctgggtg
tttcacttcagggtgctatctctcatgggactgctgggagttttggacttcctgttcgtc
aaccatgcctgtcacagcatcatcacccggggcgcctctgtccagctggtctttgggttc
gagtatgccatcctgatgacgatggtgctgaccaccttcatcaagtacctgctgcacacc
atcgacctgcagagcgagaacccctgggacaacaaggcggtgtacatgctgtacacggag
ctcttcactggcttcatcaaggtgctgctctacatggccttcatgaccatcatgatcaag
gtccacaccttcccgctgttcgccatccgacccatgtacctggccatgaggcagttcaag
aaagccgtgaccgacgctatcatgtccagacgggccatccgcaacatgaacaccctgtac
cccgacgccactccggcagacctgctggcctctgacaacgtctgcatcatctgccgtgag
gaaatggtcacgggtgccaagaagctgccctgcaatcacatcttccactccagctgcctg
cgctcctggttccagaggcagcagacctgccccacctgtcgcatggacgtcctccgagcg
tccaacgccaaccagaccccggccacgccccaggccccgcccccggcccccgcggcggcc
cccaacgctccggccgccccaccccccaacgtggccatgggcatgctgccggggttcccc
cctcccggcatgttccccttctggggacccttccccggggcccctccaccgggcgcagcc
cccgccaacggccccgccgcggacacgccccagggcaacggagaggccccccaggccgca
ggctccagctggccccctcccaccacggacccgtctgcagccccgctcggccagcccaac
cccggcttcgggttccctttcgcccccccgcccttcccctccacgccctggctgcccccg
ccacccccgatgcccttcgtgtcgtccatgcccccgccgcccccgtccctgtccgcgctg
tcggacgaggagctgggtgagctggaggcggagggccggcggggcctggaggcgcggctc
cagtgtctccacaacatccacacgctgctggacgccgccatgctcaacatccaccagtac
ctcagcaccgtggccacgctcacccccccccgcaccgggacgaggagcgcagcccgctcg
gacccctccccgccagcaggagcagaagcccccggcccggaggagtcaaccagcagctct
gagtctgcgggcggcgccactggctttacccagccggccgactccaccaccgccgcctcc
gcctccggctcggaggagcccgaggagagggagcccagcgtcgacggcgaggaggtggag
gaggaggtggcagaaggaggcgccgagcccagcgcctcggagctccgacgccggcgcttg
aggaagctcgagacatcctcgtcaacgcaagccccgcccgacaactga
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