Gadus morhua (Atlantic cod): 115552298
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Entry
115552298 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115552298
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GFIT
Other DBs
NCBI-GeneID:
115552298
NCBI-ProteinID:
XP_030224107
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Position
10:complement(24694162..24709403)
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AA seq
1180 aa
AA seq
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MDEESEEGGPTSKTTLSGEHGCQSKAKSPEQQERANSPEPRRLSLKRIRNLFRKNKAIHK
QRVHQERADSPGPSCVSMKSDHFMEQPVNFKDGSHQSSEERQHQEWVMVTSAQSEQQPPT
ELIKRAEENAHAFLDKELKKLWRDLFSDYPQCSESQREEEVDGEYEEQRRHAVEGVLDIT
MLCLMEMNEKGLADKLLSGSAAVECQHKIKSRLKKKFMKGVFQGIAIAGKSAPLNDFYTE
IFITERDSGEVNKEHEVRLIETASRKPVKEETPIRCGDIFKPLPGQDKQIRTIMTTGVAG
VGKTILTYKFTLDWAKGEANPDIHFTFPFTFRELNLLKGKEFSLVELLHHFFIETKEAGI
CRYDQFQVVFILDGLDECRLPLDFQNNPIWTDVTKSTKVEVLLTNLISGNLLPSACIWIT
TRPAAANQIPAECVDMVTEVRGFTDPQKEEYFSKIFRDEKLAKTIIAHVKKSRSLHIMCH
IPVFCWITATVLEDFFKTSQIGEETPKTLTQMYSHFLRVQSIQGDRKYRSIAETDQHWSS
QSREIIVSLGKLAFNQLESGNLIFYEDDLAGCKEYINEASVYSGVCTQIFKEECGLYQGK
VFCFVHLSVQEFLAAVYVFWSFIHTGVNLLSEEQPTSRKDILFLYTSAVDKALQSENGHL
DLFLRFLLGLSLETNQIVLRGLLGQTQGRSLFTQIKQDLMRKTSSSQTKKETVSYIKEKI
GGKLSPERSINLFHCLNELNDRSLVEEIQQFLASGSLSIKSLSPAQWSALVFILLSSEEE
LDVFDLKQYSATEEGLLRLLPVVKASKTSLLDSCHLSEGCCGALASVLSSNSSSLRELDL
STNDLQDSGVKLLSAGLGSPHCTLETLRLNGCHLSERCCEALASVLRSNSSSLRELDLST
NDLQDTGVKLLSAGLGSPHCTLETLSLSGCLVTEEGCASLASALSSNPSHLRELDLSYNH
PGDSGAALLSAGLETLSVEHGGVWRLKPALKKYAFELTLDPNTAYRRLSLSEDNRKVEVS
GWEQSYPDHPERFKSQYQVLCREALTGRCYWEVEWKGEVQIAVTHRGISRRGWGDSLSGN
NRSWSLYCDDGDYTAWHDDIKTDIRFRPAGSTRVGVYLDRPAGTLSFYRVSPGEGGSSNT
LTLLHTFQSTFTQEDLLPGFMLCGSPSPFTAGSKASLCKL
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagagtgaggaggggggtcctacctctaaaaccactctgtctggggaacat
ggctgccagagcaaagctaagagcccagagcagcaggagagagcaaactcccctgaaccc
aggcgtctctccctgaagcgaatacgtaacctgttcagaaaaaataaggctattcataaa
caaagagtccatcaggagagagcagactcccctggacccagctgcgtctccatgaagagt
gaccactttatggaacaacctgttaactttaaagacggaagtcaccaatcttctgaggaa
agacaacaccaggagtgggtaatggttaccagtgctcagtctgaacagcagcctccaaca
gagctgatcaagagggctgaggagaacgcacacgcttttctagacaaggagctgaagaag
ctctggagggatctcttctcagattacccacaatgctcagagagtcagagggaggaggag
gtggatggtgagtacgaggagcagaggaggcatgccgtcgagggagtgttggacatcaca
atgctctgcctgatggagatgaacgagaagggactggctgacaaactgttgagcggatct
gctgctgtcgagtgccaacataaaatcaagtctcgtttgaagaagaagttcatgaaaggt
gtgtttcagggaatcgctatagcaggaaaatcagcacctctgaatgacttctacacagag
attttcatcacagagagagacagtggagaggtcaacaaggaacatgaggtcagactgatt
gaaacagcttccaggaaaccagtcaaggaggaaacaccaatcagatgtggcgacattttt
aaacccttacctggacaagataaacaaatcaggacaataatgacaactggagtggccggc
gttgggaaaaccatcttaacatacaagttcactctggactgggctaaaggtgaagccaac
cctgacattcacttcacatttcccttcactttcagagagctgaatttactaaaagggaaa
gagtttagcttggtggaacttcttcatcacttctttattgagaccaaagaagcaggaata
tgcagatacgaccagttccaagttgtcttcattttggatggtctggatgagtgtcgactt
cctctggacttccagaacaacccgatatggactgatgtcacaaagtccaccaaggtggaa
gtgctcctgacaaacctcatcagtggcaacctgcttccctctgcttgcatctggataacc
acacgccctgcggcagccaatcagatccctgctgagtgcgttgacatggtgacagaggtg
agagggttcaccgacccacagaaggaggagtatttcagtaagatattcagagacgagaag
ctggccaaaacaatcatcgcccacgtaaagaaatcacgcagcctccacatcatgtgtcac
atcccagtcttctgttggatcactgctacagttctggaggacttcttcaaaacatcccag
ataggtgaagagacgcccaagaccttgactcagatgtacagccacttcctgagggttcag
tccatacaaggggacaggaagtatcgttcaatagctgaaacagatcaacactggagttca
cagagcagggagatcattgtttctctgggaaaactggcttttaaccagctggagagtggc
aacctgatcttctacgaggatgacctggcagggtgtaaagaatatatcaacgaagcctca
gtgtactcaggagtgtgcacccagatttttaaagaggagtgtgggctgtaccagggcaag
gtgttctgctttgtccatctgagcgtccaggagtttctggctgccgtttatgtattttgg
tccttcatccacactggtgtcaatctgctctcagaagaacaaccaacctccaggaaagat
atacttttcctctacacgagtgctgtggacaaggccttacagagtgagaatggacacctg
gacttgttcctccgcttcctcctgggcctttctctggagaccaatcagattgtcctacga
ggtcttctgggacagacacaaggtagatcactgttcactcagatcaaacaagatctgatg
agaaagacaagtagctcacagaccaaaaaggaaaccgtgtcttacatcaaggagaagatc
ggtggtaaactttctccagagagaagcatcaatctgttccactgtctgaatgagttgaac
gaccgttctctagtggaggagattcaacagttcctggcatcagggagtctctccataaaa
tcgctctctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaggag
ctggacgtgtttgacctgaagcaatactctgctacagaggagggtcttctgaggctgctg
ccagtggtcaaagcctccaaaacttctctgctggatagctgtcatctgtcagagggatgc
tgtggagctctggcctcagttctcagctccaactcctctagtctgagagagctggacctg
agtaccaatgatctgcaggattcaggagtgaagctgctctctgctggactggggagtcca
cactgtacactggaaacgctcaggctaaatggctgtcatctgtcagagagatgctgtgaa
gctctggcctcagttctcagatccaactcctctagtttgagagagctggacctgagtacc
aatgatctgcaggatacaggagtgaagctgctctctgctggactggggagtccacactgt
acactggaaacgctcagcttgtctggctgcctggtcacagaggaaggctgtgcttctctg
gcctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcac
ccaggagactctggagctgcgctgctctctgctggactggaaactctcagtgtggagcac
ggtggagtgtggaggctgaaaccagctctaaagaagtatgcctttgaactcacactggac
ccaaacacagcctacagacgactctctctctccgaggacaacagaaaggtggaggtgtct
ggatgggagcagtcgtatcctgatcacccagagagatttaaatcccagtaccaggtgttg
tgtagagaggctctgactggccgctgttactgggaggtagagtggaaaggagaagttcag
atagcagtgacacaccgtggaatctcaaggagagggtggggggacagcctctcaggcaac
aacaggtcctggagtctttattgtgatgacggtgattatactgcctggcacgacgatatt
aaaacagacatacgtttccgccccgctggctctaccagagtaggagtgtatctggaccgg
cctgctggcactctgtccttctacagagtgtccccaggtgaaggagggtcctcaaacaca
ctgacactcctccacaccttccagtccaccttcacccaggaggacctcctcccggggttt
atgttgtgtgggtccccttcacccttcacagctggttccaaagcttctctttgtaagtta
tag
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