Gadus morhua (Atlantic cod): 115552364
Help
Entry
115552364 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115552364
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115552364
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115552364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
115552364
NCBI-ProteinID:
XP_030224266
Ensembl:
ENSGMOG00000029618
UniProt:
A0A8C5CCL7
LinkDB
All DBs
Position
10:complement(18503998..18509944)
Genome browser
AA seq
738 aa
AA seq
DB search
MEGSDGSEQSGSDQSETQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELLSRLQQIKDGPEPPNSSPSTETGEATGGETPGGSEDSSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSQTNPNSGDFRFSLEINVNRNLAEQQAAAAAEGGQETPEAPGAPGE
VAAAGVPSAAVPAAGVTAVGVTAAGVTSAAGPAAAVVPAVRGTAAGVPAAGVPAVCVIAA
GVTAAGAPAAGLTAPVLLPPAVPAPPVPEAEAEPEPQAVSMEVEEVVEEPVVEELAVIVE
PEPEFEDAVMQEVLPEPPIPAPTEPPVQSPPSPPQRRAQRRARSPSPEPRRTRARTARSR
SPLSLERLDGLPHLRHAPRPVPAPVAPAEGSSRTRQHVPSRQSNPEYEALPAAAEAVPAA
EAPSAGPPEGEAAGAEGGAGGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNN
TFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTG
FGELSYLMDSDSESSDSNRGAGTPAEPTETLNNPEGASAPVAEEPPVGAVSAGEARTAER
DLEEGLTSGPAGREGGVGGGGGGFRARPRPPISMEEPSSLPFLRLAHFFLLNDDDEDQPQ
GLTKEQIDNLAMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENST
CPICRRAVLVSANRESVV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacggctcagagcaaagtggcagtgaccagtcagaaacacagcggcga
agacagctggaccgcctggacagggaagaggccttctaccagtttgtcaataatcttagc
gatgaggattatcgcctcatgagggacaacaaccttttgggcaccccaggtgaggtaacg
gaggatgaacttttgagtcgacttcaacaaattaaagatggtccagagccgccgaacagc
agccccagcactgaaactggagaagccactggtggtgaaaccccagggggatcagaggac
tcctccaacggtgacacgctgctggactggctgaacacggtacggcgcacggggaacacc
acgagaagtggtcaccgcggcaaccagtcatggcgggccgtgagccagacgaacccgaac
agcggcgacttccgcttcagcctagaaatcaacgtgaatcgcaacctggccgagcagcag
gcagcagccgcggcggagggcgggcaggagaccccggaggctccaggggccccaggggag
gtcgcggcagccggggtgccttcagcagctgtgcctgcagcaggagtaactgcagtaggg
gtgactgccgcaggtgtgacttcagcagccgggcctgcagcagcagttgttcctgcagta
agggggactgccgcaggtgtgcctgcagcaggtgtgcctgcagtatgtgtaattgccgca
ggtgtgactgcagcaggagcgcctgcagcagggctgactgcaccagtactacttccacca
gcggtgcctgcaccaccagtgcctgaggccgaggctgagccggagccacaggctgtgtcc
atggaggtggaggaggtggttgaggaaccagtcgtagaagagttggctgttatagtggag
ccagagcctgaatttgaagatgctgtgatgcaggaggtgctaccagaacccccgatccct
gcccccaccgagcccccggtccagtccccccctagccccccccaacgtcgagcacaaagg
agagcccgcagtccaagcccagaacctcgcagaaccagggctcgcacagcccggagtcgc
tcccctctcagcctagagcggctggacggtcttcctcaccttcgccatgccccccgcccc
gtcccggcccctgtggcacctgccgagggcagctctaggactcgacaacacgtgccctct
aggcagagcaatcccgagtacgaagcgctgccggcagcggcggaggcagtgcccgcggcg
gaggctccgagtgcaggtcctccagaaggagaggccgcgggtgcagaagggggggcaggg
ggtcgacggcctcccaccatcatgctggacctccaggtgcgtcgcgtgcggccaggcgag
taccgccaaagagacagcattgcgaaccgcacgcgctcccgctcccagaactcaaacaat
accttcctgtacgagagcgaacggggcggctttcgtaggaccttctcgcgctctgagcgc
gctggcgtgaggacctacgtcagcaccattcgcatccccatccggaggatctctgacgcc
ggcctgggcgaggcaacctccatggcgctccagtcgatgatccgtcagatcatgaccggc
ttcggtgagctcagctacctcatggactccgactccgagtcctcggactcaaaccgcgga
gccggcacgcccgcagaaccgaccgagaccctcaacaacccagaaggcgcgagcgcgcct
gtggcggaggagccacccgtgggcgccgttagtgcaggggaggctcggacagcggaaagg
gacttagaggaaggcctgacctccggcccggccgggagggaaggcggtgttgggggcgga
ggcgggggcttcagggctcggcccagaccccccatcagcatggaggagcccagctctctg
ccgttcctccggctcgcccacttcttcctcctcaacgacgacgacgaggaccagccgcag
gggttgaccaaagagcagatcgacaacctcgcgatgcgtaactttggcgagagcgatgcc
ctgaagacttgcagcgtgtgcataacggaatacgcggagggcaacaagctgcggaagctg
ccctgctcccacgagtaccacgtgcactgcatcgaccgctggctctcggagaactccacc
tgtcccatctgccgccgggcggtgctcgtgtcggccaacagggagagcgtggtttaa
DBGET
integrated database retrieval system
