Gadus morhua (Atlantic cod): 115552817
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Entry
115552817 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115552817
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115552817
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115552817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
115552817
NCBI-ProteinID:
XP_030225018
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All DBs
Position
10:complement(18513760..18518943)
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AA seq
674 aa
AA seq
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MEWSDGSEQSGSNQSESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRENNLLGTPGEVT
EDELLSRLQQIKDGPEPPNSSPSTETGEATGEIPGGSEDSSNGDTLLDWLNTVRRTGNTT
RSGHSGNQSWRAVSQTNPNSGDFRFSLEINVNRNLAEQQAAAAAEGGQETPEAPGAPGEV
AAAGVPSAAVPAAGVTAVGVTAAGVTTAAGPAAAVVPAVRGTAAGVPAAGVPAVCVIAAG
VTAAGAPASGLTAPVLPPPAVPAPPVPEAEAEPEPQAVSMEVEEVVEEPVVEELAVIVEP
EPEFEDAVMQEVLPEPPVPAPTEPPVQSPPSPPQRRAQRRARSPSPEPRRTRARTARSRS
PLSLERLDGLPHLRHAPRPVPAPVAPAEGSSSTRQHVPSRQSNPEYEAQPAAAEAVPAAE
SPSAGPPEGEAAGARGGAGGRRPPTIMLDLQVRRARPGEYRQRDSIANRTRSRSQNSNNT
FLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSIALQSMIRQIMTGF
GELSYLMDSDSSDSNRGAGTPAEPTETLNNPEGASAPVAEEPPVGAVSAGEARTVERDLE
EGLTSGPAGREGGVGGGGFTARPRPPISMEEPSSLPFLRLAHFFLLNDDGEDQXTGVTKE
QIDILATRYGGRGT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtctgacggctcagagcaaagtggcagtaaccagtcagaatcacagcggcga
agacagctggaccgcctggacagggaagaggccttctaccagtttgtcaacaatcttagc
gatgaggattatcgcctcatgagggaaaacaaccttttgggcaccccaggtgaggtaaca
gaggatgaacttttgagtcgacttcaacaaattaaagatggtccagagccgccgaacagc
agccccagcactgaaactggagaagccactggtgaaatcccagggggatcagaggactcc
tccaacggtgacacgctgctggactggctgaacacggtacggcgcacggggaacaccacg
agaagtggtcacagcggcaaccagtcatggcgggccgtgagccagacgaacccgaacagc
ggcgacttccgcttcagcctagaaatcaacgtgaatcgcaacctggccgagcagcaggca
gcagccgcggcggagggcgggcaggagaccccggaggctccaggggccccaggggaggtc
gcggcagccggggtgccttcagcagctgtgcctgcagcaggagtaactgcagtaggggtg
actgcagcaggtgtgactacagcagccgggcctgcagcagcagttgttcctgcagtaagg
gggactgccgcaggtgtgcctgcagcaggtgtgcctgcagtatgtgtaattgccgcaggt
gtgactgcagcaggagcgcctgcatcagggctgactgcaccagtactacctccaccagcg
gtgcctgcaccaccagtgcctgaggccgaggctgagccggagccacaggctgtgtccatg
gaggtggaggaggtggttgaggaaccagtcgtagaagagttggctgtcatagtggagcca
gagcctgaatttgaagatgctgtgatgcaggaggtgctaccagaacccccggtccctgcc
cccaccgagcccccggtccagtccccccctagccccccccaacgtcgagcacaaaggaga
gcccgcagtccaagcccagaaccccgcagaaccagggctcgcacagcccggagtcgctcc
cctctcagcctagagcggctggacggtcttcctcaccttcgccatgccccccgccccgtc
ccggcccctgtggcacctgccgagggcagctctagcactcgacaacacgtgccctctagg
cagagcaatcccgagtacgaagcgcagccggcagcggcggaggcagtgcccgcggcggag
agtccgagtgcaggtcctccagaaggagaggccgcgggtgcaagagggggggcagggggt
cgacggcctcccaccatcatgctggacctccaggtgcgtcgtgcgcggccaggcgagtac
cgccaaagagacagcattgcgaaccgcacgcgctcccgctcccagaactcaaacaatacc
ttcctgtacgagagcgaacggggcggctttcgtaggaccttctcgcgctcggagcgcgct
ggcgtgaggacctacgtcagcaccattcgcatccccatccggaggatctccgacgccggc
ctgggcgaggcaacctccattgcgctccagtcgatgatccgtcagatcatgaccggcttc
ggtgagctcagctacctcatggactccgactcctcggactcaaaccgcggagccggcacg
cccgcagaaccgaccgagaccctcaacaacccagaaggcgcgagtgcgcctgtggcggag
gagccacccgtaggcgccgttagtgcaggggaggctcggacagtggaaagggacttagag
gaaggcctgacctccggcccggccgggagggaaggcggggttgggggcgggggcttcacg
gctcggcccagaccccccatcagcatggaggagcccagctctctgccgttcctccgactc
gcccacttcttcctcctcaacgacgacggcgaggaccagnccacaggggtgaccaaagag
cagatcgacatccttgcgacacgttacggggggagagggacttag
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