Gadus morhua (Atlantic cod): 115552820
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Entry
115552820 CDS
T10832
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
KO
K17906
autophagy-related protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04136
Autophagy - other
gmh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115552820 (atg2a)
04136 Autophagy - other
115552820 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115552820 (atg2a)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115552820 (atg2a)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115552820 (atg2a)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115552820 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
115552820
NCBI-ProteinID:
XP_030225022
Ensembl:
ENSGMOG00000008772
UniProt:
A0A8C5AS76
LinkDB
All DBs
Position
10:complement(6635711..6663566)
Genome browser
AA seq
2041 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLGLDLYNGSGVIKDINLDVWAVN
EFLESLGAPLEIVDGFVSSIAVTIPWQALVTDHCTLEVTGLQITCRPKYRTSGSWDSQGW
SSSMTSSMQLAQECLKDPPETSEEPPAPLEGLEMFAQTIETVLRRIKVTFVDTIVRIEHQ
PLDLETGVALEMHIKRLEYCDEAVREPAGQNAVPVDIHQPPAFLHKILQLSAVQLFYEST
GTHQGPAPPTPQGSAAASEGEEEEDEDEEEEEEDDEEDEEGEEEEESPSKVPSRPTQQPL
LIGSCSGFIETMVKIKQNDMLPGPKLELDGKVGCLHLLLSPDQIIHLTDLMAALCIDTEP
ESKGPGVHSQPLEPDDLRLIEEDLSKQLDSSPRDRDWDEDGDMDPFLYGMENGDMFYSMG
PGVMSVSVTSARSGSELSDSDMESSTLSLNSLSQPAQGMSNYPRRYPVAGSMSSLSLASS
RPRGRSHSGQSEPLKPDALLRLSLGGLTLTLLQEDPPPAAAGAPSLAQVFFRELAFFKDS
MFSERDFTQLRSSFAKACPHSNIRLTGAAVQVACETRSGGRHSRSVTSDLSFSRLELLEC
LWGDGGPQYCQLLQFQKAGLFTLGTAPRPCAKLHYSLTEKQQRKGRQRVVRRDSVVKVEL
AELSAELDLDVLSRLGSLSRAFSHCPTQNPQPAATQVLSSELYSSFSLSSPHAVLRLRFP
VPDLRPPPERRPPTQKAVRQETLVLELSDLELRHQEAPDLQGEQRAQPPGQPPAEAHCLT
QLLEASFSDLQGSYEGWEGDPFPCIRVKKNGESLPRLSVRVSGGDALVSGPGGGLGCLAR
DLATMSFESPCDIGDKTSSPFSSNRTMFETEEMVIPADPEEMLQFQAHCVAHCRCAMDIS
LPLAYILLPSKQAFQSLYNRINNDLLMWEPPPPPPPPPHSDLLHPVAAHLNRRHHDNEFQ
LCKSAFRLDSDSEEEDAPFYSVDDSAEKRASQPRPNHNLSLLTLTVVIGKGRLQAMTDRK
DLHHGELVLDLEGGKIFSVAQHQNNPNLNFLCLESKKVDLYHKAAMKESPIPERLEMPNF
SVPKNLDPTIYQTEAGVSSVSGRESGLQMLSTAIKISLDPKRNVKEFLVAVRLQGATMRH
YVTQTGHSWYEQLVEFLDVIDDPILGYTAPAVITVLHTQLATCAVDYRPLYLPLRVVFTA
ESFSLSSNIIVDTATFHLRFILDDSALYLSDKCESDTVDLRRDYVCVLDIDLLELAITTW
KGSEAGKLTQPLFELRCSNNVVHVHTCADSCAALVNLLQYLVSQGDLHPPPRHTSPTEIA
GQKLPLSESPACPPPCHPAETAEINQYDLADALIDTERSQREEGPESGSPSVPRADPVSV
YLFPGEAPKRRPSYPPGDGEEEEEEQAEEEEPDLELDGLVATATEVQADGLSQEGSDGST
DNDDFCILEAPGVGIPSRDGEPVVTVLAPGPIRVKDGHFSRPRGSADLLRAPAGFPVPQS
RVVLREVSVVWHLYGGKDFGGRPLSIHATQANRGRSVPAGVRCSPSRSTGPSRPQNSWRW
AGGSGRQHALLMEIQLSKVSFQHESYPALVSGPEAEGLGLGVGPCPGGEQPLSRQVFIVQ
ELEVRDRLASSQLNKFLYLYTSESMPRRAHSNMLTVKALQVCPESGLGGPECCLRVSLLP
LRLNIDQDALFFLKDYFSNLASLVNPYLPVDPAAEVKADSAQRSSEEAESGGSLGPDLAA
SVETTYSEQSSSSAGSTSSSDQPIYFREFRFISEVPIWLDYHGKHMVIEQGTFAGILIGL
AQLNCSELKLKRLCCRHGLLGVDKVIQYAVSEWLTDIRKNQLPGILGGVGPMHSVVQLFH
GVRDLFWMPIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDIL
SPTPPLTRYSITEGRAPAGRPRRAVQPADLREGVAKAYDTVREGVIDAAQTLCDVASRGH
EQKGLPGAVGGVLRQIPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTEEGQ
E
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggctcttcccttggtcaggctcgatcaagaagcgggcctgtcggtacctc
ttgcaacactacctcggccacttcttgcaggagcgactgagtttggatcagttgggtttg
gacttgtacaatggcagtggtgtcatcaaagacatcaacctcgacgtttgggcggttaat
gagttcttggaatctctcggtgcccctctggagattgtggacggattcgtgagcagcata
gcagtgaccattccctggcaagcccttgtgacagatcactgcaccttagaagtaactggc
cttcagataacatgccgacccaagtatcgaaccagcgggagttgggactcccagggatgg
tcgtccagtatgacctccagcatgcagctggctcaggagtgtctgaaggaccccccagag
acgtcggaggagccgcccgctccgctggaaggactggagatgttcgcacagaccatcgag
acagtcctccgtcgcatcaaagtcaccttcgtggacaccatcgtccgcatcgagcaccag
cccctggacctggagacgggtgtcgccttggagatgcacatcaaacggctagagtactgt
gacgaggcggtgcgagagccagccgggcagaacgccgtgcctgtggacatccaccagccc
ccggccttcctgcacaagatcctccagctcagtgccgtgcagctcttctacgagagcact
ggcacacaccagggccccgctccccccaccccccaaggctctgcagctgctagtgaagga
gaggaggaggaagatgaggatgaggaggaggaggaggaggatgatgaggaagatgaggag
ggagaagaagaagaggaatcgccctccaaggtgccttcccgtcccacccagcagcccctc
ctcataggaagctgctcaggcttcatcgagaccatggtcaaaatcaaacagaacgacatg
ctgcccggaccaaagttggagctggatgggaaagttggctgcctgcacctgctgctgtcc
ccggatcagatcatccacctgacagacctgatggccgctctctgcatagacaccgagcca
gagagtaaaggccccggggtccacagccagcccctggagcccgacgacctgcgcctcatc
gaggaggacctcagcaaacagctggactccagcccccgggaccgggactgggacgaggac
ggagatatggaccccttcctctacgggatggagaacggagacatgttctactccatgggt
cccggtgtgatgagcgtcagtgtgacgtcggcgcgctccggcagtgagctctccgacagc
gacatggagtcctcaacgctcagcctgaacagcctctcacagccggcccagggcatgtca
aactaccccagacgttatcctgtagcaggttccatgtccagcctatccctggccagcagt
cgccccagaggccgctcccacagtggccagtccgagcccctgaagccagacgccttgctg
cggctgtcgctgggcggcctcaccctgaccctgctgcaggaggacccgcccccggccgcc
gccggagccccctcattggcccaggtgttcttccgggagctggccttcttcaaggacagc
atgttcagcgagagggacttcacccaactccggagcagcttcgccaaggcctgcccccac
tccaacatcaggctgacgggggcggcagtgcaggtggcgtgcgagacgaggagcggcggg
cgccacagccgatcggtgacctctgacctgtcgttcagccggctggagctgctggagtgt
ctctggggggacggagggccgcagtactgccagttgctccagttccagaaggcgggtctg
ttcacactgggtactgctccccgaccctgtgcgaagctccactacagcctcactgagaag
cagcagcgcaagggccgacagagggtggtgcgccgggacagcgtggtgaaggtggagttg
gcggagctgagcgcggagctggacctggacgtcctgagtcgcctggggagcctaagcagg
gccttcagccactgtcccacacagaacccccagcctgcagccacacaggtcctcagcagc
gagctgtactcctccttctccctgtcgtctccgcacgccgtcctgcggctccgcttcccc
gtgcccgacctgcggcctccgccggagaggcggccgcctacccagaaggcagtgcggcag
gagaccctggtgctggagctctcggacctggagctccggcaccaggaggcgccggacctg
cagggggagcagcgggcgcagccccccggacagccccccgccgaggcccactgcctcacc
cagctcctcgaggcctccttcagcgacctgcaagggtcctatgaaggctgggagggagac
cccttcccctgtatcagggtgaagaagaacggtgaatctcttcccaggctatcggtgcgt
gtgagtggcggggacgccctggtctcggggcccggcggcgggctgggctgcttggcccgg
gacctggccaccatgtcgttcgagagcccgtgtgacatcggcgacaagaccagctccccc
ttctcctccaaccgcaccatgttcgagaccgaggagatggtgatccccgctgacccagag
gagatgcttcagttccaggcccactgtgtggcccactgccgctgtgccatggacatcagc
ctgccactcgcctacatcctcctgcccagcaagcaggctttccagagcctctacaacagg
atcaacaatgacctcttaatgtgggagccccctcctccacccccgccccctcctcactct
gacctcctccaccccgtcgctgcccacctcaaccgccgtcaccacgacaacgagttccag
ctgtgcaagtcggccttcaggctcgattctgattcggaagaggaggacgctcctttctac
tcggtggacgactcagcagagaagagagcgtcccagccccggccgaaccacaacctcagc
ctcctcacactcactgtggtcattggcaagggccgcctccaggccatgacggacaggaag
gacctccatcatggggagctggtgttggacctggaaggagggaagatattcagcgttgca
cagcaccagaacaacccaaatctcaacttcctgtgcttggagagcaagaaagtggacctt
tatcacaaagctgcaatgaaagagtcccccatcccagaacggttggaaatgcccaacttt
agcgttccgaagaacctggacccaaccatttaccagacggaggcgggggtgagcagcgtg
agcggcagggagagcgggctgcagatgctgtccacggcgatcaagatctccctggacccc
aagaggaacgtcaaggagttcctggttgctgtgcgacttcagggcgccaccatgcggcac
tacgtgacccaaaccggccacagctggtacgagcagctcgttgagtttctggacgtgatt
gacgaccccattctgggatacacagcgcctgctgtcattactgtcctccacactcagctg
gccacctgcgctgtggactacaggcctctgtacctgccgctgagagtcgtcttcactgcg
gagtccttctccctgtccagcaacatcatcgtggacacggccaccttccacctcagattc
atcctggatgactctgccctctacctctcggacaagtgtgagagtgacaccgtagacctg
aggagagactacgtgtgtgtgctggacatcgacctgctggagctggcaatcaccacgtgg
aaaggcagtgaagcgggaaagctgacccagcctctcttcgagctgcggtgctccaacaac
gtggtccacgtgcacacgtgcgccgactcgtgcgcggccctggtgaacctgctgcagtac
ctggtctcccagggcgacctgcacccgcccccccgccacacctcccccaccgagatagcc
ggccagaaattaccgctgtcagagagccccgcctgcccgcccccctgtcaccccgccgag
acggcagagatcaatcagtacgacctggcagacgccttgattgacacggagaggagccaa
cgggaggaggggccagagtcaggctccccctcggtcccgcgggcggaccccgtctccgtc
tacctcttcccgggagaggcccccaagcgccggccctcctacccgcccggggacggcgag
gaagaggaggaagagcaggcggaggaggaggagccagacctggagctggatgggctggtc
gccacggcaacggaggtccaggccgacgggttgtcccaggaggggtcggacggttccacg
gacaacgacgacttctgcatcctggaggctccgggcgtcggaataccgtccagggacggg
gagcccgtggtgacggtgctggccccggggcccatcagggtgaaggacggccacttctcc
cggccgcggggcagcgccgacctgctgcgggcccccgccggcttcccggtcccccagagc
cgcgtggtgctgcgggaggtgtccgtggtctggcacctctacgggggcaaggacttcggg
ggccggcccctgtccatacacgccacgcaggctaacaggggtcgctccgtgccggcgggc
gtgcgctgctccccctcccgctccaccggcccctcccgaccccagaactcgtggcgctgg
gccgggggcagcggccggcagcacgccctcctcatggagatccagctctccaaggtgtcc
ttccagcacgagtcctacccggcgctggtgtcggggcccgaggccgagggcctgggcctg
ggcgtgggcccctgccccggcggggagcagcccctctccaggcaggtgttcatcgtccag
gagctggaggtccgcgaccgcctggcctcctcccagctcaacaagttcctttacctctac
accagcgagagcatgccccgacgggcccactccaacatgctgacagtgaaggcgctacag
gtctgccccgagtcaggcctggggggtcccgagtgctgcctgagggtcagcctgctgccc
ctccgcctcaacatcgaccaggacgccctgttcttcctgaaggactacttcagtaacctg
gcctccctggtgaacccctacctgcctgtcgaccctgcagcagaagtgaaggcagactcc
gcccagaggtcgagcgaggaggcggagtcagggggcagtctgggtcctgacctcgcggcc
tccgtggaaaccacctatagcgagcagagctcctcctctgccggctccacctcctcctct
gaccagccaatctacttccgggagttccgtttcatctctgaggtgcccatctggctggac
taccacggcaaacacatggtcattgagcaggggacgtttgcgggcatcctgatcgggctg
gcccagctcaactgctccgagctgaagctgaagaggctgtgctgcagacacgggctactg
ggcgtggacaaggtgatccaatacgctgtcagcgagtggctgaccgacatccgcaagaac
caactgccggggattctgggaggcgtaggccccatgcactctgtagtccagctgttccac
ggcgtcagggacctgttctggatgcccatcgagcagtacaggaaggacggccggatcatc
cgcggcctccagcggggggcggcgtccttcggcacctccaccgcctcggccgcgctggag
ctcagcaaccggctggtgcaggccatccaggcgacggcggagacggtgtacgacatcctg
tcccccaccccgccgctgacgcgctacagcatcaccgagggccgggcccccgccggccgg
ccccgccgcgccgtgcagcccgccgacctgcgggagggcgtggccaaggcctacgacacc
gtcagagagggggtgatcgacgcggcgcagaccctgtgcgacgttgcgtcgcggggccac
gagcagaagggcctccccggggcggtgggcggcgtcctgcggcagatcccgcccaccgtg
gtccgccccctcatcgtggcctcggaggccacctccaacctgctgggcggcatgcgcaac
cagatcaaaccggacgcccgcaaggaggacttcctgaagtggcgcacggaggaaggccaa
gagtga
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