Gadus morhua (Atlantic cod): 115552834
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Entry
115552834 CDS
T10832
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115552834
Cell adhesion molecules [BR:
gmh04515
]
Cadherins
Protocadherins
115552834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115552834
NCBI-ProteinID:
XP_030225041
Ensembl:
ENSGMOG00000020251
LinkDB
All DBs
Position
10:complement(15474055..15481139)
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AA seq
1017 aa
AA seq
DB search
MDHRRARDSWAPVTGMVVCLLLCACVVDLVLAQIRYSIPEELDHGAFVGNIAEDLGLDVA
KLSARRFRIVSGAKKQYLEVNLENGILFVNEKIDREDLCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNIDITESAAPGSRFPLESAQDLDVGTNSLRTYQLSANQH
FVLNIQTRNDGSKFAELVLDVPLDREQQKTHEMVLTALDGGSPERSGTARITITVLDAND
NVPVFDRSVYRSSLVENAPRGTLLLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSIDP
YTGEIRVKGIVDFEKSSVFELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSLENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDRES
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGHIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIKVQA
QDAGFPPLSSNVTVTVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVGKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLVEKDTTRQRLVILVKDNGQPPLS
ATVSILLTVVDSVPESLSDFGDLTLSPQPPSNLAFYLIVSLSTISLIFLVTIIILAVVKC
YKDRETLSGYSLPPLACCCCAGFQPDPPPEVFKKSNINLQISTAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPSSAPRNNEAKNADNSWNAQGRSSSVNNGSTTPN
ELKQPNTDWTLTKNQNSNSIKSYNSINMDGTLMRKAMHADPENYVSSMAPGQYWTWGNHM
RGGGKDNKMSAAVPAVPARSWTPRCTPPPQQQQPSLPPLPPHPHPHPHPHPHPHPPPDYQ
HNVYIPGTPSGFCTLRPVVHRSELDVRNAFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatcacaggcgcgcaagagacagttgggctccagtcacggggatggtggtgtgtttg
ctgctgtgtgcctgtgtggtggacctggttctggcgcaaatacgctactctattccggag
gagttggaccacggggcttttgtggggaacatcgcggaggacctgggattggacgtggcc
aagctatcggcgcgtcggttccgtatagtctcgggcgctaagaagcaatatttagaagtg
aacttggaaaacggcattttatttgtcaacgaaaaaatagaccgcgaggatctttgcgaa
cgcagcccgagctgttttcttcatctacaagtggtgattgaaaatccactagaactctat
agggtggaagtagagattttagatgtaaatgacaactccccgagttttccgtggagtgag
tttaacatcgacatcaccgagtccgctgcgcccggttcccggttcccgttagagagcgcg
caggacctggacgtgggcaccaattctctccgcacataccagctcagtgccaaccagcac
ttcgtgttgaacatccaaacgcgtaacgacgggagcaagtttgcagagctcgtgctggac
gtcccgctggaccgggagcagcagaagacgcacgagatggtgctgacagccttggacgga
ggctcgcccgaacgctccgggacagccagaataaccatcaccgtattagacgccaatgat
aacgtgcctgtattcgatcgatccgtgtacagatcgagtcttgtggaaaacgcaccacgg
ggcactctccttctgaaactaaacgccacggatttggacgagggctccaacggagaggtg
acctacgcgttcagcgggcacgctccgttaaaggtgcgcgagttgttcagcatcgacccg
tacactggcgagatccgcgtgaaagggatcgtggactttgagaaatcgagtgtgttcgag
ctttacgtgcaggctaaggaccgcggtccgtcggcggtggccgttcacagtaaggtgctg
gtcgacattctcgacgtgaacgacaacgcgcccgaagtcatcctgacctccgtctccacg
cccgttcaggaggacgcgccaccgggcacggtgatcgccgtgatcagtgtcatggatcgg
gactcgttggagaacggaaacgtggactgtcaaatccccagcaatgtgccctttcaactc
cactcctcctttaaaaactattacactctcgtgaccagcgagttcctggacagggagtcg
gtgtccgagtacaacatcactctcacggctcgagacctggggtcaccatctctgtccacg
aggaaaacaatcctcgtccaagtgtctgacattaatgacaaccccccgcgcttcgcccag
ccctcctacacagtctatgtgactgagaacaatgccccgggcgcttcaatttgctccgtg
accgcgttcgaccctgattccaatcagaacgcctatttgtcttattccattctggaaggt
cacatccagggcatgcccgtgtccacttatgtctccatcaactcggacaacggcaacatc
tacgccctgcgctcctttgactacgagcagctcaggaacttccagatcaaggtccaagcc
caggacgcgggtttcccgcctctcagtagtaacgtcaccgtcaccgtcttcgttttggat
cagaacgataacgcgccggtcatcgtatctccgctgcccaaaaacggcacagtggccacg
gaggtggtcccgcgatcagtggacgctgggtatctggtgggcaaaatcacggcgttagac
gcagacgctggacagaactcccgcttatcctatcaggtgttacaagccaccgacccaggg
ctctttagcgtggctttatacacgggggagattcggactatacgccgtttggtggaaaaa
gacacgacaaggcagaggcttgtgatactagtgaaggataacgggcagcccccgctctcc
gccaccgtgtcgatcctcctcacggtggtggacagcgtgcccgagtcgctgtcggatttc
ggggacctcacgctcagcccgcagcccccctccaacctcgctttctacctgatcgtgtcc
ctgagcaccatctccctgatcttcctggtgaccataatcatactggccgtggtgaagtgt
tacaaggaccgggagaccctcagtgggtacagtctccccccgctggcttgctgctgctgc
gcgggcttccagccggaccccccgccggaggtgttcaagaaatcaaacatcaacctgcag
atttccaccgcggccaaagtgcccacgaactgcatggaggtcaacggcaacagcagcctc
tcccagtcctattgttataaagtgtgcctgaccccagaatcggctaaaagtgactttatg
ttcctgaagccgtgcagccccagtagcgcgccgcggaacaacgaagcgaagaacgcggac
aactcatggaacgcgcagggccgaagttcatccgtgaacaacggatcgaccaccccgaac
gagctcaagcagccaaacacagactggacgttgacgaaaaatcaaaactccaattcgatt
aaaagctataactctataaacatggacggcacgctgatgcgcaaggccatgcatgccgac
cctgagaactatgtgagctccatggcccctgggcagtactggacctggggaaaccacatg
aggggcggagggaaagacaacaagatgtccgccgccgtgcccgccgtccccgcccgctcc
tggaccccccgctgcaccccgccaccccagcagcagcagccctccctgccccccctcccc
ccgcacccccacccccacccgcacccgcacccccaccctcacccgcctcccgactaccag
cacaacgtgtacatccccggcacgccctccgggttctgcaccctgaggcccgtggtgcac
cgcagcgagctggacgtgcgcaacgccttctccaccttcggcaagaagaggcggcttcag
atgtccccgcagggcgaggccgccatcatcaacaacgacctgtacaacgattaa
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