Gadus morhua (Atlantic cod): 115553320
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Entry
115553320 CDS
T10832
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115553320 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115553320 (nhlrc1)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115553320 (nhlrc1)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115553320 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
PHD_4
Motif
Other DBs
NCBI-GeneID:
115553320
NCBI-ProteinID:
XP_030225316
Ensembl:
ENSGMOG00000007047
LinkDB
All DBs
Position
11:1589408..1591011
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AA seq
397 aa
AA seq
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MAVNPHSLRSQATRSPERILREIQSNLLECKVCFEIFNPAGQSERRPQNLPCGHVLCLDC
IGALSHPVLKKLECPFCRQLCDVDSTSHCHALGDLQELLLNSKVGVPSYGAKALHVFGSL
QLCSAFGGWGTLFNPTGIAVLGTSGTMVVVHDGDTRLVVFGPQGRRLHGFGRRGDICYPL
DVAVTPNGHVVVTDAGDKSLKVFTSRGCHVLTLTDVFQLPWGVDVDMRGNILVSDSQTGI
LSRVTLDCVLGVILDHQTPITDLEHPRAVACCQVTGATAVVEHLLFDESHPTWNHRPARL
RVYDQYFSLLYQKDSFSLSLGSTAWLCMSAVAFEGDGNVIIIDSKQAMIWKLHKGNKLTP
LISENLVRPVGLICTAKDSTLTVLDSGDHAVKIYSFR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatcctcattccctaagaagtcaggccactcggagccctgagcggatcctg
cgagagatccagagcaacttgctggagtgcaaggtgtgctttgagatattcaatccagca
gggcagagtgagcgcagaccccagaaccttccctgcggccatgtgctctgcctggactgc
atcggtgctctttcccaccccgtgctgaagaagctggagtgcccattttgtcgacagctg
tgcgatgttgacagcacctcccactgccacgccctcggcgacctgcaggagctgctgttg
aacagtaaagttggtgttccaagctacggagcgaaagcccttcatgtctttggatctctg
cagctctgctctgcctttggtggctggggaacactgtttaaccccactgggattgctgtg
cttgggacctctgggaccatggtggtggtgcatgatggagacacgcggttggtggtgttt
ggcccccaagggaggaggctacatggctttgggcggaggggggacatatgttacccactg
gacgtggccgtgactcccaatggtcacgtggtggtgacggacgcaggagacaagtctctg
aaagtgttcacctccagggggtgtcacgtgttgacactcacagacgtgttccagctgccc
tggggcgtggatgtagacatgcgtgggaacattctggtctcagattcccagactggcatc
ctctcccgggtcactctggactgtgttcttggtgtcatcttggatcatcagacgcccatc
actgatctggagcatcccagagcggtggcctgttgtcaggtgacgggggccaccgcagtg
gtagagcatctgctttttgatgagtcacaccccacttggaaccaccggcctgccagactc
agagtgtatgaccaatacttcagcctcctctatcagaaagacagcttcagcctcagcctc
gggtccacggcctggctgtgcatgtccgcagtggctttcgaaggagatggaaatgtgatt
attattgactccaagcaggcaatgatttggaagctgcataagggcaataagctaactccc
cttattagcgaaaaccttgtgcggccagttgggcttatttgtacagccaaggatagcaca
ctaaccgttttggacagtggagaccatgctgtgaagatttattcttttagataa
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