KEGG   Gadus morhua (Atlantic cod): 115553432
Entry
115553432         CDS       T10832                                 
Symbol
atg5
Name
(RefSeq) autophagy protein 5 isoform X1
  KO
K08339  autophagy-related protein 5
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04136  Autophagy - other
gmh04140  Autophagy - animal
gmh04216  Ferroptosis
gmh04621  NOD-like receptor signaling pathway
gmh04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115553432 (atg5)
   04136 Autophagy - other
    115553432 (atg5)
  09143 Cell growth and death
   04216 Ferroptosis
    115553432 (atg5)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    115553432 (atg5)
   04622 RIG-I-like receptor signaling pathway
    115553432 (atg5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115553432 (atg5)
   03029 Mitochondrial biogenesis [BR:gmh03029]
    115553432 (atg5)
Membrane trafficking [BR:gmh04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    115553432 (atg5)
Mitochondrial biogenesis [BR:gmh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    115553432 (atg5)
SSDB
Motif
Pfam: ATG5_UblA ATG5_UblB ATG5_HBR DUF6782
Other DBs
NCBI-GeneID: 115553432
NCBI-ProteinID: XP_030225519
Ensembl: ENSGMOG00000009722
LinkDB
Position
11:complement(9598847..9627078)
AA seq 275 aa
MADDKDVLRDVWFGRIPTCFALYQDEVTEKEAEPFYLLLPRVSYLTLVTDKVKKHFLKAV
KPEDVEEMWFEYEGTPLKWHYPIGVLFDLHALNTALPWSITVHFKNFPERDLLHCLSNSV
IEAHFMSCIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQTMSDRPFIQKLFRPASPEGHTHTLGDLLKEMYPAAIAHDGDAKKYQVLI
QGIEPLLETPLQWLSEHLSHPDNFLHVCILPVPTD
NT seq 828 nt   +upstreamnt  +downstreamnt
atggcagatgacaaggacgtgctaagagacgtgtggttcggccgcattcctacttgcttc
gcactctaccaggatgaggtcacggagaaggaggccgagcctttctatctgcttctgccc
agggttagctacttgaccctagtcacagacaaggtgaagaagcacttcttgaaggcggtg
aagccagaggacgtggaggagatgtggtttgagtatgagggaacgccgctcaaatggcac
tatccaatcggagttctgtttgacctccatgccctcaacactgcgctgccctggagcatc
actgtgcacttcaagaactttccagagcgcgacctgctccactgcctgtcaaactcggtg
atagaggcacactttatgtcctgcatcaaagaggcagacgcactgaaacacaagagccaa
gtcatcaacgatatgcagaagaaagaccacaaacagctgtggatgggcctgcagaatgac
aagtttgatcagttctgggccatgaaccggaagttgatggagtatcccacagaagagggg
ggcttcaggtacatccccttcaggatataccagacgatgagtgacaggccgttcattcaa
aaactgtttcggcccgcctcgcctgagggccacacacacacactgggggacctgctgaaa
gagatgtatcctgcagccatcgcacacgacggtgatgccaagaagtaccaggttctgatc
cagggcatagagcctcttctggagacccctctgcagtggctcagcgagcacctcagccac
ccagacaacttcctccacgtctgcatactccccgtgcccaccgactga

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