Gadus morhua (Atlantic cod): 115553459
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Entry
115553459 CDS
T10832
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115553459
Spliceosome [BR:
gmh03041
]
Common components
Common spliceosomal components
General mRNP proteins
115553459
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
115553459
NCBI-ProteinID:
XP_030225586
Ensembl:
ENSGMOG00000004740
LinkDB
All DBs
Position
1:complement(16244464..16252570)
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AA seq
493 aa
AA seq
DB search
MADDFEIEAMLEAPFRKDEIKSSHANGHEAHSKKKRRSRSRSPGASKKRSRSRDRKKNKK
RSKSRERKRNASRERHPRSRSRDRPGRYRARKSPIRKRSKTRSPVKREKSPIRQPIDNLT
PEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYIEFLEASS
VPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDML
RGIFEPFGRIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKVGHV
TERTDASTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPAAAQQALQMTGSIP
FGNMNASSSAATPAQALNLPSQPLATHCLQLSNMFNPQAENDPGWDTEIKDDVIEECNKH
GGIVHTYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLFPD
SVMANQLLVPTRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgattttgaaattgaggcaatgctggaggctccatttagaaaggatgaaatc
aaatcctctcatgcaaatggacatgaagctcacagcaagaagaaaagaaggagccggagc
agaagtccaggggcttctaaaaaaaggagcaggagtcgggatcgaaagaagaacaagaag
agaagcaagagcagagagcggaagcgaaatgccagccgggagcgtcacccccgctcccgc
agcagggatcgccccggccgctacagagctcgcaagagtcccatacggaaacgttccaaa
actcgtagccctgttaaaagagaaaagagtccaatcagacaacccatcgacaacctcacg
ccagaggagagagacgcgcgcaccgtcttctgcatgcagctggctgcacgcatccgggcc
cgtgacctggaggacttcttctctgccgtggggaaggtgagagatgtgaggatgatatca
gacaggaactccagaagatcaaaggggattgcctacattgagttcctggaggccagttct
gtgcctctggcgattggtttgactggacagagacttctgggagtgcccatcattgtccag
gcctcgcaggcagagaaaaacagagcagccgccatggcaaacaacctgcagaagggcagc
gctggcccaatgcggctctacgtcggctccctgcacttcaacatcacagaggacatgctg
cggggaatattcgagccttttggcaggattgaaggcatacagctcatgatggacagtgaa
actggtcgatccaaaggatacggcttcatatcatttgcagacgcagaatgtgcgaaaaag
gccctagagcagctaaatggctttgagctggccgggcggccgatgaaagtaggccacgtg
acggagcggacggacgcatccaccgccagctcttttctggacaacgacgagttggagagg
actggcatcgacctgggcaccacaggccggctgcagcttatggccagattagcagaaggt
actggtctgaagatccctgcggctgcacagcaggccctgcagatgactggttccattccc
tttggaaacatgaatgcctcatcatctgctgcaactccagcacaggcgttaaacctccca
tcacagcctctggcaacacactgtctgcagttgtcaaacatgttcaacccccaggcggaa
aatgaccccggctgggacactgagatcaaagatgatgtcattgaggaatgcaacaaacat
ggcggaatagttcacacatacgtcgataagaactctgctcaaggaaatgtctacgtaaaa
tgcccttccatacctgcagcgatggctaccgttaatgcccttcatggacgatggtttgct
ggtaaaatgatcactgcagcatacgtcccgttaccaacgtatcataaccttttccctgat
tcagtaatggcaaatcaactactggtgccaacacgcagatag
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