Gadus morhua (Atlantic cod): 115553667
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Entry
115553667 CDS
T10832
Symbol
cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115553667 (cthrc1)
Cilium and associated proteins [BR:
gmh03037
]
Other cilia and associated proteins
Stereociliary proteins
115553667 (cthrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
115553667
NCBI-ProteinID:
XP_030225985
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All DBs
Position
11:complement(15047438..15052489)
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AA seq
256 aa
AA seq
DB search
MSPFGRLLLLVCLVLPLYAVEKVRNRGYRKDAEFDKCTGNDADNPNCTRISEEARSTNSN
TMYGSCLQGPAGNPGREGNPGTNGIPGTPGIPGRDGMRGEKGECVSEVFEEPWRPNYKQC
AWNSLNYGIDLGKIADCTFTKLRSDSALRVLFSGSLRLKCKTACCQRWYFTFNGAECTGP
LPVESIIYLDQGSPELNSTINIHRTSSVEGLCEGMKSGLVDVAVWVGTCSDYPRGDASTG
WNSVSRIVIEELPKSF
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctttcggccggctgctgctactcgtctgcctcgttcttcctctttatgcagtg
gaaaaggtgaggaaccgagggtatcgaaaggatgcagaatttgataagtgcactggaaac
gatgcagacaatcccaactgcactagaatctcagaggaagcacgatctaccaattcaaac
accatgtatggaagctgtctgcaagggccagcgggtaaccctggcagagagggaaacccc
ggaaccaacggcatccctgggacgccgggcatccctggccgtgatggcatgagaggagag
aagggcgagtgtgtgagtgaggtgtttgaggagccctggagacccaactacaagcagtgt
gcctggaactctctcaactacggcatcgacctggggaaaatagcagactgcacatttacc
aagctgcgctcagacagtgccctgagagttctcttcagcggttccctcagactcaagtgt
aagaccgcttgctgccagagatggtacttcacctttaatggtgcagagtgtacaggccct
ctgcccgtcgaatccatcatctacctggatcagggcagcccagagctcaactctaccatt
aacatccacaggacatcgtcagtggaagggttgtgcgaaggcatgaagtcgggcctggtg
gacgtggctgtttgggtggggacatgttctgactacccccggggtgacgcgtccacgggc
tggaattctgtctccaggatcgtcattgaagagcttccaaaatcattttga
DBGET
integrated database retrieval system
