Gadus morhua (Atlantic cod): 115553781
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Entry
115553781 CDS
T10832
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115553781 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115553781 (prpf3)
Spliceosome [BR:
gmh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115553781 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
HEAT_2
TPX2
Motif
Other DBs
NCBI-GeneID:
115553781
NCBI-ProteinID:
XP_030226165
Ensembl:
ENSGMOG00000008535
LinkDB
All DBs
Position
11:complement(3341251..3358180)
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AA seq
730 aa
AA seq
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MKTSCERRSKTESLLRESRAKMSLPKREMEELRPWVERTVKKVLGFSEPTVITAALHCLG
KGMDKRKTIDQLRPILDDSAGSFVERLFESLEESRHIRSSKGAGEKNRKRDLKDVFGDDA
DMGGIKELPQDATAPKRKRTPRFEEVEEPEVIPGPPPESPGMLTKMQIKQMMETATRQIE
ERKKQLSFSSSGPTASILPLPTPQTHLEPTPVSRLLSNSSCPPAVGSLSIHPSQAATFMN
DAIEKARKAAELQARISSQLAMKPGILGALGNTGPHNLVALANLHAMGIAPPKVEIREVN
KPTPLILDELGRTVDATGKEVELTHRMPTLKANIRAVKREQFRQQLKEKPGEDLESTSYF
DQRVNITPAQRARKGFKFHEQGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLA
LITPKKELGDGEVPHVEWWDSYIVPTNAELIQETKFEVMEFFGVTNLVEHPAQICAPVDT
DKTVTLGVYLTKKEQKKLRRQTRREAQKELQERVRLGLMPPPEPKVRISNLMRVLGTEAV
QDPTKVEAHVRAQMAKRQKAHEDANAARKLTAEQRKEKKIKKIKEDLTHGVHIAVYRIRN
LHNPSKKFKVEANANQLYLTGTVVLHRDVNTVVVEGGPKSQKKFKRLMMNRIKWQERNTK
REDPDFDDETKRNNKCYLIWEGTAKERSFGDMKFKQCPTENMAREHFKKHGTEHYWDLAL
SQSVLEGTDD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtcgtgtgaacggcgctccaaaacagaaagtttacttagagaaagtcgagcc
aagatgtctctaccaaagcgagagatggaggagctgcgaccgtgggtggagcggaccgtg
aagaaggtgttgggcttctcagagcccaccgtcatcactgctgccttgcactgccttggc
aaaggcatggacaagagaaagaccatagatcaactccggcctattctagacgactctgct
ggaagctttgtggagcgccttttcgaatccttggaagagagccgccacatccgtagcagc
aaaggagcaggagaaaagaaccgcaagagagacctcaaggatgtgtttggggatgatgca
gacatgggcggaataaaggaattgccgcaagatgcgacggcgcccaagaggaaacgtacc
ccccgttttgaggaggtggaggagcctgaagtcataccggggcctccacccgagagccct
gggatgctgaccaagatgcagatcaagcagatgatggaaacagccacgagacagattgag
gagaggaagaaacagctaagcttctcttcctcaggccccacagcatcgatactgccgctg
cccaccccacagacacatctagagcctaccccagtgtccaggcttctctccaattcctct
tgccctccagcagtcggctcgctgtccatacatccatcgcaggctgccaccttcatgaac
gatgcaatagagaaggcccgcaaggcagctgagctgcaggcccgcatctcgtcccagctg
gccatgaagcctggtatacttggggctcttggaaacactgggccgcacaaccttgttgcc
ctggccaacctgcacgccatgggcatagctcctccaaaagtggagatcagagaggtgaat
aagccaaccccactgatcctggatgagctgggaagaacggttgatgcaaccggcaaagag
gtggagctcacacaccggatgcccaccctcaaagccaacattcgtgccgtgaaaagggag
cagtttcgccagcaactgaaggagaagcccggagaggacttggagtccacgtcctacttt
gaccaacgagtcaacatcacgcccgcccagcgtgctcgaaagggatttaagttccacgag
caggggcgctttgagaagattgcccagagaatacgaactaaggcccagctggagaagttg
cagaccgagattgcccaggctgcgaagaagacaggcatacaggcgtccactaagctggct
cttattaccccaaaaaaggagcttggggatggagaggtgccccacgttgagtggtgggac
tcgtacattgtgcccacaaatgcagagcttatccaagaaacaaagtttgaggtcatggag
tttttcggagtaaccaacctagttgagcacccggcccagatctgcgctccagtggacacg
gataagacggtaacgctgggcgtttacctgacgaagaaagagcagaagaagctcagaaga
cagacccgtagggaggcccagaaggaactgcaagagcgggttcgtctgggactaatgcct
cccccagagcccaaagtgagaatctccaacctgatgagggtgctgggaacggaggcggtg
caggaccccaccaaggtggaggcccacgtacgagcacagatggccaagaggcagaaggct
cacgaagacgccaatgctgctcgcaaactgacagcggaacagaggaaagagaagaagatc
aagaagataaaggaagacctcactcatggggttcatatcgcagtttacagaatccgtaac
ctgcacaatccctccaagaagttcaaagtggaggccaacgccaaccagctgtacttgacg
ggcaccgtggtgctgcacagagacgtcaacacggtggtggtggagggaggcccaaaatcc
cagaagaagttcaagaggctgatgatgaacagaattaaatggcaggagcgcaacaccaaa
agagaagaccccgactttgacgatgaaaccaagaggaacaacaagtgctatttaatatgg
gagggaacggctaaagagcgcagctttggagacatgaagttcaagcagtgcccgacagag
aacatggccagagaacacttcaaaaagcacggcacagaacactactgggacctggccctg
agccagagcgtgctggagggcaccgacgactga
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