Gadus morhua (Atlantic cod): 115553928
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Entry
115553928 CDS
T10832
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115553928 (clstn3)
Cell adhesion molecules [BR:
gmh04515
]
Cadherins
Cadherin related
115553928 (clstn3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
FAM176
Motif
Other DBs
NCBI-GeneID:
115553928
NCBI-ProteinID:
XP_030226335
Ensembl:
ENSGMOG00000015526
LinkDB
All DBs
Position
11:7397953..7418850
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AA seq
969 aa
AA seq
DB search
MDRMNFLSFFLLCLTSVANSNKANKHKPWIETEYQGIVMENDNTVLLSPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGTVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVYTFWVTAFDCGKNRAQADAQV
VITVKPSCKPGWNGWTKRVEYTPGSGSVPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSSLPTLPSSDSSLVFSFNGSAHIAA
VPNSVAAAVSGDHFTLQLWMRRGGANVQPASSAPTPGQSRGSHKEEETIICSTVRNEDSF
SHYSLSVHGCRLSLFYWPDVSATRPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVT
FDPALIHDNGAIPNPAPRQRMVIGACWAEPEEKQKISNNTIPEGKDSGRYVGGYRGLLSG
VTVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRA
VQQVTYRNSLRFATPGVRPLKLTTSLRCFSEESCLSLKQLEGYLVVLQPDAPQISLSGVG
PHLARPPPEFEGPRGVPLFPELRIVCSLSHAVNTAAQVMEGGALMSDAVAHTLDGCEVQP
LGEELNPEREELLVDMDVLRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSA
RFERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSQHSGELSG
HSMPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRSEGEIGGAKEGSSQWD
DSALTIIVNPMESFESRMGIAADTEGEGEEEEEEDEEEEEATDSPDDAAGDDQRIIAKKD
GRDANPRRY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgaatttcctctccttcttcctcctttgcttgacttcagttgccaatagc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggcatcgtcatggag
aacgacaacacggtgctgctcagcccgccgctgttcgctctggacaaggatgcaccgctt
cactacgctggggagatctgcgggttccgggtgcacaacgggccctctgggtcgggcacg
gtccagtttgaggcggttgtgctggaccgctccaccggggagggcctggtgcgctccaag
gagcccctggactgtgagagccagagggagcacagcttcaccatccaggcctacgactgt
ggggagggccccgacggagccaacagcaagaagtcccacaaggccacggtgcacgtgcgc
gtcaacgacgtcaacgagttctcccccgtgttcgtggagcggcgctacgaggcctccgtg
cccgagggccgcctgttcgaccgcatcgtgcgcgtggaggccctggacgccgactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaacgtgcccttcgccatc
gacaacgacggcaacatcaagaacacagagccgttggactccaagcgccagcgcgtttac
accttctgggtgaccgccttcgactgcgggaagaaccgcgcgcaggccgacgcccaggtg
gtcatcacggtgaagccgtcctgcaaaccgggctggaacggatggaccaagcgtgtggag
tacacccccggctccggcagcgtgcccctgttccccagcctccacctggagacatgcgag
gagacggtgtggaacatccaggctaccgtagagctgcagaccggccacatcgggaagggc
tgcgacagagacagctactcagaccgctccgtgcgccgcctctgtggtgccgtcaggggt
gaggtggacctccttccccccccgtccccggccgccaactggacctcgtccctgcccacc
ctgccctcctccgactcctccctggtcttctctttcaacggctccgcccacatcgccgcg
gtacccaactcggtggcggcggccgtgtccggagaccacttcaccctgcagctgtggatg
cggaggggcggggccaacgtacagcccgcctcctccgcccccacccccggtcagagcagg
ggcagccacaaggaggaggagaccatcatctgcagcaccgtcaggaacgaggactccttc
tcccactactctctctccgtgcacggctgtcgcctctctctcttctactggcccgacgtc
tctgccacacgccccgtcaagttcctgtggaaactggagcaggtgtgtgacagtgagtgg
catcacctgtctctcagcgtccagttcccttccgtcactctgtatgtggacggtgtgacc
tttgaccctgcactcatccatgacaacggagccatccctaaccccgccccccgccagagg
atggtcatcggggcctgctgggcagagcctgaggagaagcagaagatctccaacaacacc
atcccagaggggaaggactcggggaggtatgtgggcggttaccgcggcctgttgtcgggg
gtgacggtgcgtccgggcagcgtggagccccacagcgtggtggagtgcctgtatgcctgc
cgggaggggctggactttggagacctggagacgctgggctccggcatgaaggtccatgtg
aaccccagccagtcggtgctggtgctggagggagacgacatcgagagctttaaccgcgcc
gtgcagcaggtcacctacagaaactccctgcgcttcgctacaccgggagtaaggcccctc
aaactcaccacctccctcaggtgcttcagcgaggagagctgtctgtccctgaagcagctg
gagggctatctggtggtcctgcagccggacgccccgcagatctccctgtccggggtgggg
ccccacctggcccgcccgccccccgagttcgagggcccccgaggcgtccctctcttcccc
gagctcaggatcgtgtgctccctgtcccacgcagtcaacaccgccgcccaggtgatggag
ggtggagctctgatgtccgatgctgtggcccacactctggacggctgtgaggttcagccc
ctgggggaggagctgaacccagagagggaggagctgctggtggacatggatgtgctgcgg
gagaggggcctggagatcattaataccacagcttacatcgccatcacaggcgctgagtcc
atctctgtgtacgaggacgtcctgcgctccgtccggtaccggctggccaagggctcggcc
cgcttcgagaggaggttccgtctgtcatgctcggagatgaacggacgctacaccagcaat
gagctgacgctggaggtgaacttcctccactctctggacagcctgtaccatccatcacac
ctgctggcctcccagcagcagttcctccatccgtctcagcactctggggagctgagtggg
cacagcatgccaaacccacaccgcaactcggtggtgccaggagctgccaccgtcatcatc
atggtatgcgtgggcttcctggtcgtcatggtgatacttggagtgttccgaatccgctcc
atccatcgccgtagcgagggggaaataggcggagctaaggagggcagcagccaatgggac
gactcagccctcaccattatcgtcaacccaatggagtcctttgagtcccgtatgggcatt
gcagcggatacagaaggggagggcgaggaggaagaggaggaggatgaggaagaggaggag
gccacagactcccccgacgatgccgccggtgacgaccagcgaatcatcgccaagaaagac
ggacgggacgccaaccctcgtcgctactga
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