KEGG   Gadus morhua (Atlantic cod): 115553928
Entry
115553928         CDS       T10832                                 
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
  KO
K22661  calsyntenin 3
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gmh04515]
    115553928 (clstn3)
Cell adhesion molecules [BR:gmh04515]
 Cadherins
  Cadherin related
   115553928 (clstn3)
SSDB
Motif
Pfam: CLSTN_C Cadherin Laminin_G_2 Laminin_G_3 FAM176
Other DBs
NCBI-GeneID: 115553928
NCBI-ProteinID: XP_030226335
Ensembl: ENSGMOG00000015526
LinkDB
Position
11:7397953..7418850
AA seq 969 aa
MDRMNFLSFFLLCLTSVANSNKANKHKPWIETEYQGIVMENDNTVLLSPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGTVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVYTFWVTAFDCGKNRAQADAQV
VITVKPSCKPGWNGWTKRVEYTPGSGSVPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSSLPTLPSSDSSLVFSFNGSAHIAA
VPNSVAAAVSGDHFTLQLWMRRGGANVQPASSAPTPGQSRGSHKEEETIICSTVRNEDSF
SHYSLSVHGCRLSLFYWPDVSATRPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVT
FDPALIHDNGAIPNPAPRQRMVIGACWAEPEEKQKISNNTIPEGKDSGRYVGGYRGLLSG
VTVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRA
VQQVTYRNSLRFATPGVRPLKLTTSLRCFSEESCLSLKQLEGYLVVLQPDAPQISLSGVG
PHLARPPPEFEGPRGVPLFPELRIVCSLSHAVNTAAQVMEGGALMSDAVAHTLDGCEVQP
LGEELNPEREELLVDMDVLRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSA
RFERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSQHSGELSG
HSMPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRSEGEIGGAKEGSSQWD
DSALTIIVNPMESFESRMGIAADTEGEGEEEEEEDEEEEEATDSPDDAAGDDQRIIAKKD
GRDANPRRY
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggacagaatgaatttcctctccttcttcctcctttgcttgacttcagttgccaatagc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggcatcgtcatggag
aacgacaacacggtgctgctcagcccgccgctgttcgctctggacaaggatgcaccgctt
cactacgctggggagatctgcgggttccgggtgcacaacgggccctctgggtcgggcacg
gtccagtttgaggcggttgtgctggaccgctccaccggggagggcctggtgcgctccaag
gagcccctggactgtgagagccagagggagcacagcttcaccatccaggcctacgactgt
ggggagggccccgacggagccaacagcaagaagtcccacaaggccacggtgcacgtgcgc
gtcaacgacgtcaacgagttctcccccgtgttcgtggagcggcgctacgaggcctccgtg
cccgagggccgcctgttcgaccgcatcgtgcgcgtggaggccctggacgccgactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaacgtgcccttcgccatc
gacaacgacggcaacatcaagaacacagagccgttggactccaagcgccagcgcgtttac
accttctgggtgaccgccttcgactgcgggaagaaccgcgcgcaggccgacgcccaggtg
gtcatcacggtgaagccgtcctgcaaaccgggctggaacggatggaccaagcgtgtggag
tacacccccggctccggcagcgtgcccctgttccccagcctccacctggagacatgcgag
gagacggtgtggaacatccaggctaccgtagagctgcagaccggccacatcgggaagggc
tgcgacagagacagctactcagaccgctccgtgcgccgcctctgtggtgccgtcaggggt
gaggtggacctccttccccccccgtccccggccgccaactggacctcgtccctgcccacc
ctgccctcctccgactcctccctggtcttctctttcaacggctccgcccacatcgccgcg
gtacccaactcggtggcggcggccgtgtccggagaccacttcaccctgcagctgtggatg
cggaggggcggggccaacgtacagcccgcctcctccgcccccacccccggtcagagcagg
ggcagccacaaggaggaggagaccatcatctgcagcaccgtcaggaacgaggactccttc
tcccactactctctctccgtgcacggctgtcgcctctctctcttctactggcccgacgtc
tctgccacacgccccgtcaagttcctgtggaaactggagcaggtgtgtgacagtgagtgg
catcacctgtctctcagcgtccagttcccttccgtcactctgtatgtggacggtgtgacc
tttgaccctgcactcatccatgacaacggagccatccctaaccccgccccccgccagagg
atggtcatcggggcctgctgggcagagcctgaggagaagcagaagatctccaacaacacc
atcccagaggggaaggactcggggaggtatgtgggcggttaccgcggcctgttgtcgggg
gtgacggtgcgtccgggcagcgtggagccccacagcgtggtggagtgcctgtatgcctgc
cgggaggggctggactttggagacctggagacgctgggctccggcatgaaggtccatgtg
aaccccagccagtcggtgctggtgctggagggagacgacatcgagagctttaaccgcgcc
gtgcagcaggtcacctacagaaactccctgcgcttcgctacaccgggagtaaggcccctc
aaactcaccacctccctcaggtgcttcagcgaggagagctgtctgtccctgaagcagctg
gagggctatctggtggtcctgcagccggacgccccgcagatctccctgtccggggtgggg
ccccacctggcccgcccgccccccgagttcgagggcccccgaggcgtccctctcttcccc
gagctcaggatcgtgtgctccctgtcccacgcagtcaacaccgccgcccaggtgatggag
ggtggagctctgatgtccgatgctgtggcccacactctggacggctgtgaggttcagccc
ctgggggaggagctgaacccagagagggaggagctgctggtggacatggatgtgctgcgg
gagaggggcctggagatcattaataccacagcttacatcgccatcacaggcgctgagtcc
atctctgtgtacgaggacgtcctgcgctccgtccggtaccggctggccaagggctcggcc
cgcttcgagaggaggttccgtctgtcatgctcggagatgaacggacgctacaccagcaat
gagctgacgctggaggtgaacttcctccactctctggacagcctgtaccatccatcacac
ctgctggcctcccagcagcagttcctccatccgtctcagcactctggggagctgagtggg
cacagcatgccaaacccacaccgcaactcggtggtgccaggagctgccaccgtcatcatc
atggtatgcgtgggcttcctggtcgtcatggtgatacttggagtgttccgaatccgctcc
atccatcgccgtagcgagggggaaataggcggagctaaggagggcagcagccaatgggac
gactcagccctcaccattatcgtcaacccaatggagtcctttgagtcccgtatgggcatt
gcagcggatacagaaggggagggcgaggaggaagaggaggaggatgaggaagaggaggag
gccacagactcccccgacgatgccgccggtgacgaccagcgaatcatcgccaagaaagac
ggacgggacgccaaccctcgtcgctactga

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