Gadus morhua (Atlantic cod): 115553955
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Entry
115553955 CDS
T10832
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115553955 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115553955 (prpf31)
Spliceosome [BR:
gmh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115553955 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
115553955
NCBI-ProteinID:
XP_030226386
Ensembl:
ENSGMOG00000005345
UniProt:
A0A8C5AK42
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All DBs
Position
11:6820991..6826337
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AA seq
505 aa
AA seq
DB search
MSLADELLADLEEAGEEGEDDLYGGTEEGDSDGEVAECKAEGMLEDIPEEMELDYAGTES
VSSIAKLRDSKQFSEIMDKIKIYVGKQRKNSEVMGPVESDPEYRLIVAANNLTVEIENEL
NIIHKFTRDKYSKRFPELESLVPTSLDYVRTVKELGNNLDKCKNNENLQQILTNATIMVV
SVTASTTQGTMLGDDELKKLEEACDMALELNQSKHQIYEYVESRMSFIAPNVSIIVGAST
AAKIMGIAGGLTNLAKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVASKCTLAARVDSFHESGVGKVGYDLKEEIERKFDKWQEPPPVKTVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGISSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNTSEFVKVKKE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcggacgagctactagcggatcttgaggaggccggggaggaaggcgaagac
gacctctatggaggaacagaggagggagatagtgatggcgaagttgcagaatgcaaagcc
gaaggcatgttggaagacatccctgaggagatggagctggactacgctgggacagagagt
gtatcatctatcgccaagctccgagacagcaagcagttttcagaaatcatggacaaaatc
aaaatctatgttggaaagcagcggaaaaactcagaagttatgggcccagtggagtcagac
ccagaatacagactcatcgttgcagccaataacctcacagtagagattgaaaatgaactg
aatatcattcacaagtttacccgtgacaaatactcaaagaggtttccagagctcgagtca
cttgtgccaacctctctggattacgttcggacggtcaaagaacttgggaacaatttggac
aagtgcaagaacaacgagaatttgcagcagatcctcactaatgccacgatcatggtggtc
agcgtcacagcgtctacaacacaggggactatgcttggcgatgatgaactgaagaagctg
gaggaggcctgtgacatggccctggaactaaaccaatccaaacaccagatctacgaatac
gtagaatccaggatgtccttcatcgctcctaatgtctccatcatcgtaggagcatcaacg
gcggccaagatcatgggtattgccggaggcctgaccaacctggctaagatgccggcctgt
aacctcatgttgttgggagcccagaggagaaccttgtctggcttcagcagcacctccctg
ctgccccacacaggctacatctaccactgtgacgtggtgcagtcgctgccccctgacctg
aggaggaaagcggctcgtctggtggcctcaaagtgcactctggccgcccgagtggacagc
ttccatgagagtggtgtagggaaggtcggctacgacctgaaggaggagatagagaggaag
tttgacaaatggcaggagcctcccccagtgaaaacagtgaagcccctgccggccccactg
gacggccagcggaaaaagagaggtggaaggaggtatcgtaagatgaaggagcgcctgggt
ctgacggagatcaggaaacacgccaacaggatgacctttgcagagattgaagacgatgcc
taccaagaggatctgggcttcagtctgggtcagctgggtaagagtggcagcgggcgagtc
aggcaggcgcaggtcaacgaggccacaaaggcccggatctccaagtccctccagaggaca
ttgcagaagcagagcatgacgtatgggggcaagtctaccgtcagagaccgctcttcggga
atcagttccagcgtggcttttactccgcttcagggcttagagattgtgaacccgcaggca
gcagagaagaaggtggctgaggccaaccagaaatacttttccaacacgtccgagtttgtt
aaggtgaagaaggaataa
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