Gadus morhua (Atlantic cod): 115554009
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Entry
115554009 CDS
T10832
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115554009
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmh03310
]
115554009
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115554009
Nuclear receptors [BR:
gmh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115554009
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
DUF2924
Androgen_recep
Motif
Other DBs
NCBI-GeneID:
115554009
NCBI-ProteinID:
XP_030226455
Ensembl:
ENSGMOG00000008012
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Position
11:complement(4289516..4306529)
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AA seq
469 aa
AA seq
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MEYEEYNASPGDAPIRRAGIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYS
CSRQNNCQIDRTSRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLSAEIQKHKQQQQ
QEQHHHQQQQQQQLQRGASLTRDVHSYLVCSSSDSPASDLIYRGCSGPLGSRCLGRGDSG
GPPNPRGFDSRQPSPELMGIQPYDLLEDAFGHYSHVLQSREDLCGSILRSHRETSQYRVE
ELHDLKWKLFNREEIQAYQNKTMDEMWQYCAIRLTDGVQYVVEFAKRIPGFRLFSQNDQI
ALLKSGSMEVLLVRMSRYFNTENNTVFFDGKFAGPQVFKSLACGDLISAVFDFARGMCAL
GLSEPQTALFSALVLINTDRPSLEDRVQAQRVQRDLMVALTHMLHRDNRESLLHKLHERM
ALLRSLCRQHMEKLQSFSHCYPDTVRSRFPPLYRELFDSEADAPQGTAP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgaggagtacaatgcatctccaggtgacgcaccgatcagacgagctgggatt
gaagtgataccctgcaagatctgcggagacaagtcttcaggagtgcactacggagtgatc
acgtgtgaggggtgcaagggattcttcagacgaagccagctgcccactgtgtcttactcc
tgctcccggcagaacaactgccagatcgaccggaccagccgcaaccgctgccaacactgc
cggctgcagaaatgcctcgcgcaaggcatgagccgcgatgcggtgaagttcggacggatg
tccaagcgtcagcgggactcactgtctgctgagattcaaaaacacaagcagcagcagcag
caagaacaacatcaccatcaacagcagcagcagcagcagctccagagaggggcctccctc
acaagggacgtgcactcctacctggtatgctcttcaagtgattcccctgcttcggacctg
atctaccgcggctgcagcggccccctagggtcccggtgcctggggagaggggacagcggt
ggtcctcctaaccccagagggtttgattccagacagccatctcctgagttgatggggatt
caaccttatgacctgctggaggatgcctttggtcactattcccatgttctgcaaagcaga
gaggacctgtgtggcagtatcctgcgctcccacagagagaccagccaatacagagtggag
gaactgcacgatctgaaatggaagttgttcaatagggaggagatacaggcctatcagaac
aagacgatggatgagatgtggcagtattgcgccatcagactcaccgatggtgtgcagtat
gtggtggagttcgccaagcgcatcccgggcttccgtctgttcagccagaacgaccagatc
gctctcctcaaaagtgggtcgatggaggtgctgctggtgaggatgagccgctacttcaac
acagaaaacaacacagtgtttttcgacgggaagtttgctggacctcaagtcttcaagtca
ctggcgtgcggggatctcatctcggccgtgttcgactttgcccgtggcatgtgtgctctg
ggtctcagcgagccccagaccgctctgttctcggccctggtgctgatcaacaccgaccga
ccctctctggaagacagagtgcaagctcaaagagttcagagagacttgatggtggcactc
actcacatgttacacagagacaaccgagagagcctactacacaagcttcacgagaggatg
gcgttgttgcgctcgctgtgccggcagcacatggagaagctgcagtccttcagccactgc
taccccgacacggtgcgctcccgcttccccccgctctacagggagctgtttgactccgag
gccgatgcccctcaagggacggctccctga
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