Gadus morhua (Atlantic cod): 115554034
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Entry
115554034 CDS
T10832
Symbol
taf2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115554034 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115554034 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115554034 (taf2)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115554034 (taf2)
Peptidases and inhibitors [BR:
gmh01002
]
Metallo peptidases
Family M1
115554034 (taf2)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115554034 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
115554034 (taf2)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115554034 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
New_glue
Motif
Other DBs
NCBI-GeneID:
115554034
NCBI-ProteinID:
XP_030226486
Ensembl:
ENSGMOG00000007551
LinkDB
All DBs
Position
11:23038189..23066596
Genome browser
AA seq
1250 aa
AA seq
DB search
MNKKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLKYFSSAYTAAAVSAVGPPTPGHGELVIK
VSSELWKQGDESKGVKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFW
FPCVDSYSELCTWKLDITVDAAMVAVSCGDLVETIYTHDMRKKTFSYVLPIPTAAPNISL
AVGPFEILVDPYMHEVTHFCLPQLLPLLKHSMSFLHEIFEFYEEILTCRYPYSCFKTVFV
DEAYVQVSAYASMGIFSTNMLHSGMIIDQTPQTRSCLAQALAQQFFGCFISRMSWADEWV
LKGISGYIYGLYLKKTFGVNAYRHWIKEELDKIVEYELKTGGVLLHPTYSGGKEKDNPTP
HLHFSTKHPHTLSWEYYQMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQ
SHMWSQMLVSTHGFLKSISNVSGKDIGPLIKQWVSELGWWKFFGSFAFNRKRNVLELEIR
QDYISSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNG
EEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRFERDVVAQEEAISAL
EKFPTPASRMALTDILETEQCFYRVRMQACFCLAKIANLMVSTWQGPPAMKSLFTRMFCC
KSCPNIVKTNHFISFQSYFLQKTMPVAMALLRDVHNLCPKDVLNFILDLIKYNDNRKNKF
SDNYYRAELIEALTNSLTPAISISNEVRTVDNLQGDVRLILEEITRFLNMEKLLPSFRNT
ITVSCLKAIRQLQKNGHIPSDPSLFKSYAEYGHFVDVRVAALEAVIDYTRVERSSVEMDW
LMDMVHNDPVHWVRHKILGMLATNPPFTKDTDSALCTEALVDQLWKLMNSGTSHDWRLRC
DAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPEMGQSNVVVDTPASIGIH
GIGMSYSASQLDEEPDPISSGVCGVGQPPPSLKRKAETPLGSPPEPGQILQPHDEDGGRR
YKIRFNTMEEEDIDMESVHDSQGFIQHHLTLLDRPSTPGKEPPGLEQALLSMPATPLPSF
TKEGPTTTTAAAAAMASSTSSSSTATVLTTPSGTAKHGGEHGSGGGSGHHHHHHHHHHHE
HKKKKKKHKHKHKHKHKHESKDKERDKDPAHPYSNSPASGRSMHSPSLSD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaaggataaaggattcgagagcccgcgtccttttaaattgacgcaccag
gtggtttgcatcaacaacatcaatttccagaggaagtctgttattggttatgtggagctt
accatattccccacggtggtcaacctgaacaggatcaagctcaacagcaaacaatgtcga
atctatcgagtccgagtcaacgaactcgaggcgccgttcatctacaacgatccaaccctc
gaggtctgccaccatgagtccaagcagaggaacctgaaatatttctccagtgcctacacg
gcggctgcggtgagtgcggttggacccccgacgccgggccacggggagctggtcatcaag
gtctcctccgagctctggaaacaaggagacgagtctaaaggtgtgaaggtgtacatcgag
ttttctctggaccagcccaaaggggggcttcactttgtggtgcccgatgtcgagggcagc
atggcggagaggggggctcatgtcttctccttcggataccagaactctactaggttctgg
ttcccgtgcgtggactcctactctgagctgtgcacgtggaagctggacatcaccgtggac
gccgccatggtggcggtgtcctgcggcgaccttgtggagaccatctacacccacgacatg
cgcaagaagaccttcagctacgtcctccccatccccaccgccgcccccaacatctccctg
gccgtggggccctttgagatcctcgtggacccctacatgcacgaggtgacccacttctgt
ctgccccagctgctgcccctgctcaagcactccatgtccttcctgcacgagatctttgag
ttctacgaggagatcctgacctgccgctacccgtactcctgcttcaagacggtcttcgtg
gacgaggcctacgtgcaggtgtccgcctacgcctccatgggcatcttcagcaccaacatg
ctccacagtggcatgatcatcgaccagaccccccagacgcgcagctgcctggcccaggcc
ctggcccagcagttctttgggtgcttcatctcccgcatgtcctgggccgatgagtgggtg
ctcaaaggaatctccggctacatttacgggctgtacctcaagaagacattcggggtcaat
gcgtaccgacactggatcaaagaggagctggataagatcgtggagtatgagctgaagacg
ggaggagtcctgctgcacccgacctatagtgggggcaaggagaaagacaatccgactccc
catctccacttctccaccaagcacccccacacgctgtcctgggagtactaccagatgttc
cagtgcaaggctcacctggtgatgcggcttatcgagaaccgcatcagcatggagttcatg
ttacaggtgttcaacaagcttctaagccttgccagcacggcctcgtctcagaaataccag
agtcacatgtggagtcagatgctggtctccacgcacggcttcctcaagtccatatccaac
gtctctgggaaagacatcgggcccctcatcaagcaatgggtatcagagctcgggtggtgg
aagttctttggcagcttcgccttcaacaggaagaggaacgtgctggagctggagatcaga
caggactacatctcttctggaacgcagaaatacgtgggacccatcaaggtgacggtgcag
gagctggatgggtcattcaaccacacgctgcagatcgaggagaacagcctcaagcacgac
atcccctgccactcaaagagcagacgcaacaagaagaagaagattcctctgatgaatgga
gaagaggtggacatggatctgtcggccatggacgctgactcgcctctcctgtggatccgc
atcgaccccgacatgtccatcctcaggaaggtggagtttgagcaggcggacttcatgtgg
cagtaccagctccgcttcgagagggatgtggtggcacaggaggaggccatctccgcgctg
gagaagttccccacgccggcctccaggatggcgctgacagacatcctggagacagagcag
tgcttctacagggtccgcatgcaggcctgcttctgcctggccaagatcgctaacctaatg
gtgagcacatggcagggcccgccggccatgaagtccctgttcaccaggatgttctgctgc
aagagctgccccaacatcgtgaagaccaaccacttcatcagcttccagagctacttcctg
cagaagacgatgcctgttgccatggcgctgctgagagatgtccacaacctgtgtcctaaa
gacgttctcaacttcatcctcgacctcatcaagtataacgacaacaggaaaaacaagttt
tcggacaactactaccgcgcggagctgatcgaggcgctgaccaactccctgacgccggcc
atcagcatcagcaacgaggtgcgcacggtggacaacctgcaaggggacgtcaggctcatc
ctcgaggagatcacgcgcttcctcaacatggagaagctgctgcccagcttccgcaacacc
atcaccgtcagctgtctgaaagccatccgtcaactgcagaagaacggccacatccccagc
gacccatcgctcttcaagtcctacgccgagtacggacactttgtggacgtccgcgtcgcc
gccctggaggctgtgattgactacaccagagtggagaggagctcggtggagatggactgg
ctgatggacatggtgcacaatgatccggtccactgggtcaggcacaagatcctgggcatg
ctggcgaccaaccccccgttcaccaaggacacggactcggcgctctgcaccgaagccctg
gtcgaccagctctggaaactcatgaactccggcacctcccacgactggcgcctacgctgc
gacgcagtcaacctgtactacaccttgttcgggctgacccggccctcctgcctgcccctc
cccgagctgggcctggtgctgaacctcaaggagaagaaggccgtgctcaaccccaccatc
aagcccgagatggggcagagcaacgtggtggtggacacccccgccagcatcggcatccac
ggcatcggcatgagctactccgcctcgcagctggacgaggagccggaccccatctcctcg
ggggtctgcggtgtgggccagccgccccccagcctgaagaggaaggccgagaccccgctg
ggctcgcccccggagccggggcagatcctgcagccgcatgacgaggacggcggccgacgc
tacaagatccggttcaacaccatggaggaggaggacatcgacatggagtcggtccacgac
agccaaggcttcattcagcatcacctcaccctcctggacagaccctccacaccaggcaag
gagcccccagggctggagcaggcgctgctgtccatgcccgccacgcccctgccctccttc
accaaggagggccccaccaccaccaccgccgccgccgccgccatggcctcctccacctcc
tcctcctccaccgccaccgtcctcaccaccccctcggggacggccaagcacgggggagag
cacggcagcggcggaggcagcggccaccaccaccaccaccaccaccaccaccaccacgag
cacaagaagaagaagaagaagcacaagcacaaacacaagcacaagcacaagcacgagagc
aaggacaaggagcgcgacaaggacccggcccacccctacagcaacagccccgccagcggc
cgctccatgcactctccctccctgtccgactag
DBGET
integrated database retrieval system
