Gadus morhua (Atlantic cod): 115554069
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Entry
115554069 CDS
T10832
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03030
DNA replication
gmh03410
Base excision repair
gmh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115554069 (pole)
03410 Base excision repair
115554069 (pole)
03420 Nucleotide excision repair
115554069 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115554069 (pole)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115554069 (pole)
Enzymes [BR:
gmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115554069 (pole)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
115554069 (pole)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
115554069 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
GARP
Motif
Other DBs
NCBI-GeneID:
115554069
NCBI-ProteinID:
XP_030226540
Ensembl:
ENSGMOG00000012053
LinkDB
All DBs
Position
11:29188450..29224202
Genome browser
AA seq
2298 aa
AA seq
DB search
MVYQNTGRYRADRGPGGGADQDHQQDDNSAAKRLERSQFTDEMDARFGFDRMKEPGEKTG
WLVNMHPTEILDEDKRLVGAVDYYFIQEDGSRFKAALPFKPYFYIATKKNCEREVISYLS
KKYQGRLSKLEVISKEDLDLPNHLVGLKRSYVKLSFSTVDDLTRVRREIAPAVRKNRERE
QSNDAYTTMLSSAMAGGSVTMEEEDGRYKKMSDQLDNVVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGTAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEADEAALIQRFFDHVLETKPNIFV
TYNGDFFDWPFVETRALQHGLTMYKEIGFQKDNQGEYKSSQAIHMDSFRWVKRDSYLPVG
SHNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTADGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLYQRVEMTLRHAIEEEEKIPMDQVTNFEELC
EEIKAKLVSLKEVPNRIECPLIYHLDVAAMYPNIILTNRLQPYAMVDEAICAACDFNKPG
ANCQKKMSWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHSLNREDQAKHEK
KRLADYCKKAYKKVHHTRLEEKVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SALDSGDAAEAKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSMEKKAKVTISYPGAMLNIL
VKEGFTNDQYQELVDPATLTYATRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFESFLKGTTLDEVYASVAKVADYWLDVLYSK
AANMPDAELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGAPVTERAIPMAIFQAEPSVKKHFLRKWLKTPALHDMDIRTILDWNYYIERLGST
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQPL
QPGEAADLEDFGRPPRPLQPAVLISTKRRRASQGEESQGVSQDLELTQSWREILGAPPPQ
GTTQEERLVWLRYHKKKWELQLRQRKERRKRRRLGDGEAQPVGGGVIRDAPTTGLGGFLR
RTARSILDMPWQIVQIAETAQPGLYRLWAVMGNDLHCMKLHIPRVFYVNQKVPKQEDGAN
YRKVNRMLPRSNIVYFLYEYSVPEDMYQEHINEINADLAAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKQALRTLAGREADTFELENLEMRSLAQFSYLEPGSIRHIYLYHHSQGHKALF
GVFIPSQRKASIFILDTVRSNQMPNLSTLYGVERTALLEKTTEDLLPPEKHTFEVRAEND
IKAIYRALQRTLLNYKEERRGPTLIAVQSNWELRRLAAGMGVLEEFPVVPVHVADDISYN
VLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWMSPTTRPDLGGREADDSRLVMESDDRVSVEINAPGCYSTVCVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGAVAVASYDETALCSNTFRVLKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLG
STVIYGNFNTIILGTKKRRTDDAIGYVEYITNSIHSREIFHSLSISFSRCWDFLLWMDPA
NHGGVKGKLPSGALCGEDAALLKKKKRKSGEDAEEDGSEDEEEEEAGGEEEDLDGEVDEV
EDLIESNWNIMQYLPQTASCQKYFVMIVSAYIAAVYHSMKEELRRSAPGATPVKRRAGGS
QATQQAAEELGALPGMISFSQEYVANELTQSFFTITQKIQRKLAATRSVTQPSEMFPTLP
GSHLPLNNPALEFIKYVCQVLSLDANITNQVNKLKRDLLRLVDVGEFSEHAQFRDPCNSY
ILPEVICHSCNFCRDLDLCKDPTLAQDGSVLPQWFCSNCRAQYETEFIETSLVEALQKKL
MSFTLQDLACVKCKGVKEANMPIYCRCAGSFDLTFTTKSFSEQIKVFRSIAAHYNMVFLE
ETIDWLLTMSPQINLSVH
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggtttatcagaacaccggacggtaccgggccgaccgtggacctggagggggggcagat
caggaccaccagcaggatgataactcggcggccaagcggctggagcgaagtcagttcacc
gacgagatggacgcccgcttcggcttcgaccggatgaaggagccgggagagaagacgggc
tggctggtcaacatgcacccgactgagatcctggacgaggacaaacgactggtcggtgct
gtggattactacttcatccaggaggacggaagtcgcttcaaggcagcactccccttcaag
ccctacttctacatagccactaaaaagaactgtgagcgggaggtcatctcctacctctcc
aagaagtaccagggcaggctgtccaagctggaggtgatctccaaggaggacctggacctg
cccaaccacctggtgggcctgaagaggagctacgtcaagctgtccttcagcacggtggac
gacctcaccagggtccgccgcgagatcgctcctgccgtccggaagaaccgggagcgggag
cagtccaacgacgcctacaccaccatgctgtccagtgccatggcgggcggcagcgtgacg
atggaggaggaggacgggcgctacaagaagatgtcggaccagctggacaacgtggtggac
atgagggagtacgacgtgccctaccacgtccgtgtgtccatcgacctgaagatccacgtg
gcccactggtacaacgtccggtaccgcggcaccgcctaccctccggagatcgtccgccgg
gacgacctggtcgagcgacccgacccggtcgttctggccttcgacatcgagaccaccaag
ctgcctctgaagttcccggacgcagagacggaccagatcatgatgatctcctacatgatc
gacggacagggcttcctcatcacaaaccgagagatcgtgtccgaggacatcgaggacttt
gagttcactcccaagcccgaatacgaaggccccttcaccgtcttcaacgaggctgatgag
gcagccctcattcagcggttcttcgatcacgttctagagaccaagcccaacatctttgtc
acgtacaacggggacttctttgattggccctttgtggagacccgggcgctgcagcacggc
ctcaccatgtacaaggagatcggcttccagaaggacaaccagggggagtacaagtcctcg
caggccatccacatggacagcttcaggtgggtgaagagggacagctacctgccggtcggc
agccacaacctgaaggcggcggcgaaggccaagctgagctacgaccccgtggagctggac
cccgaggagatgtgtcgcatggccaccgaggagccacagaccttggccacctactctgtg
tcggacgccgtggccacgtactacctctacatgaagtacgtccaccccttcatcttcgcc
ctttgcaccatcatccccatggagcccgacgaggtgctgaggaagggctcgggcacgctg
tgcgaggcgctgctgatggtgcaggccttccacgccaacatcgtgttccccaacaagcag
gagcaggtgttcaacaagctgacggccgacggtcacgtgctggactcggagacctacgtg
ggcgggcacgtggaggccctggagtccggggtgttccgcagcgacatcccctgccgcttc
aagatgaacccggcggcgttcgacttcctgtaccagcgggtggagatgaccctgcgccac
gccatcgaggaagaggagaagatccccatggaccaggtcaccaactttgaggagttgtgt
gaggagatcaaggccaagctggtgtctctgaaggaggtccccaaccgaatagagtgcccc
ctcatctaccatctggacgtggccgccatgtaccccaacatcatcctcaccaaccggctg
cagccctacgccatggtggacgaggccatctgcgccgcctgcgacttcaacaagccggga
gccaactgccagaagaagatgtcctggcagtggaggggggagatcatgccagcgagccgc
agtgagttccaccggatccagcagcagctggagtcggagaagttcccgccgttcttcccc
aacggcccgccccgcgccttccactcgctgaaccgcgaggaccaggccaagcacgagaag
aaacgcctcgcagactactgtaagaaggcctacaagaaggtgcaccacacgcgtctggag
gagaaggtgaccaccatctgccagcgggagaactccttctacgtggacacggtccgcgcc
ttcagggaccggcgatacgagttcaagggcctgcacaaggtgtggaagaagaagctgtcg
tcggcgctggacagcggggacgcggcggaggccaagcgctgcaagaacatggagatcctg
tacgactcgctgcagctcgcccacaagtgcatcctcaactccttctacggctacgtcatg
aggaagggggctcgatggtactccatggagatggcgggcatcgtgtgtttcaccggagcc
aacatcatcacccaggccagggagctcatcgagcagattggacgcccgctggagctggac
acagacgggatctggtgcgttctccccaacaccttcccggagaactttgtggtgaagacg
agcatggagaagaaggcgaaggtgaccatctcgtacccgggcgccatgctgaacatcctg
gtgaaggagggcttcaccaacgatcagtaccaggagctggtcgaccccgccacgctcacc
tacgccacgcgcgccgagaacagcatcttcttcgaggtggacgggccgtacctcgccatg
atcctgcccgcctccaaggaggagggcaagaagctgaagaagaggtacgctgtgttcaac
gaggacggctccctggccgagctgaagggcttcgaggtgaagaggaggggtgagctccag
ctcatcaagatcttccagtcctccgtgttcgagtcgttcctgaagggcaccaccctggac
gaggtctacgcctccgtggccaaggtggccgactactggctggacgtgctctacagcaag
gcggccaacatgccggacgcggagctgttcgagctgatctcggagaaccgctccatgtcg
cggcgcctggaggactacggcgagcagaagtccacgtccatcagcacggccaagcggctg
gccgagttcctgggcgaccagatggtgaaggacgccgggctcagctgccgctacgtcatc
tccaggaagcccgagggggcccccgtcaccgagagagccatccccatggccatcttccag
gccgagcccagcgtgaagaagcacttcctgaggaagtggctgaagacccccgccctgcac
gacatggacatccgcacgatcctggactggaactactacatcgagaggctgggcagcacc
atccagaagatcatcaccatcccagcagccctgcaacaggtgaagaacccggtccccagg
gtccgccaccccgactggctccacaagaagctcctggagaagaacgacatctacaagcag
aagaagatcagcgagctgttcaccagcgagggcaagagacaggtggcccaccagcccctc
cagcccggcgaggcggcggacctggaggacttcgggcgtcccccccgccccctgcagccg
gccgtgctgatcagcaccaagcggcgccgcgcctcccagggggaggagagccagggggtg
tcccaggacctggagctcacccagtcctggagggagatcctgggggccccacccccccag
ggcaccacccaggaggagcgtctggtgtggctgcggtaccacaagaagaagtgggagctg
cagctgcggcagaggaaggagcggaggaagaggaggaggctgggggacggggaggcccag
cccgtgggcgggggcgtgatccgggacgcgcccaccaccggcctggggggcttcctgcgc
cggacggcccgcagcatcctggacatgccgtggcagatcgtgcagatagcggagacggcc
cagccaggcctgtaccgtctgtgggccgtgatgggcaacgacctccactgcatgaagctg
cacatcccccgcgtcttctacgtcaaccagaaggtccccaagcaggaggacggggccaac
taccgcaaggtgaacaggatgttgccgcgctccaacatcgtgtacttcctgtacgagtac
tccgtgccggaggacatgtaccaggagcacatcaacgagatcaacgcagacctcgccgcg
cccgacatcgagggggtctacgagacgcaggtgcccctcctgttccgtgccctggtgcag
ctgggctgtgtctgtatggtcaacaagcaggcgctgcggacgctggccggccgcgaggcc
gacaccttcgagctggagaacctggagatgaggtcgctggcccagttcagctacctggag
cccgggagcatccgccacatctacctgtaccaccacagccaaggtcacaaggccctgttc
ggagtgttcatcccctcgcagcgcaaggccagcatcttcatcctggacacggtgcgcagt
aaccagatgccaaacctgagcacgctgtacggggtggagcgcacggcgctgctggagaag
accacggaggacctgctgccccccgagaagcacaccttcgaggtccgcgcagagaacgac
atcaaggccatctaccgggcgctgcagcgcacgctgctcaactacaaggaggagcgccgt
gggcccaccctgatcgcggtgcagtccaactgggagctgcggcggctggcggcggggatg
ggcgtcctggaggagttccccgtggtgccggtccacgtggccgacgacatcagctacaac
gtcctggactggcagcggcacggagctcgacgcatgatccgccactacctcaacctggac
tcctgcctgtcgcaggccttcgacatggcccggtactaccacctgcccgtggggaacctg
ccccaggacgtgtccatcttcggctcggacctgttcctggcccgccacctgcggaagcac
aaccacctgctgtggatgtcccccaccacccggcccgacctggggggacgcgaggccgac
gacagccggctggtgatggagagcgacgaccgggtgtccgtggagatcaacgccccgggg
tgttactccacagtgtgtgtggagctggacctgcagagcctggcggtgaacaccatcctc
cagtcgcagcacgtcaacgacatggagggcggggccagcctgggggtgagcttcgacgtc
atccagcaggcctcgctggaggacatgatgtccgggaaccagggggccgtggcggtggcc
agctacgacgagaccgccctctgctccaacaccttcagggtcctgaagagcatggtggtg
ggctgggtccgggagatcacccagtaccacaacgtctacgcagacaaccaggtgatgcac
ttctaccgctggctgcgctcgcccagctccctgctgtacgaccccgcccttcatcgcacg
ctgcacaacatgatgaagaaggtcttcctgcagcttgtggcggagttcaagcgtctgggc
tccaccgtgatctacgggaacttcaacaccatcatcctgggcaccaagaagcgccgcacc
gacgacgccatcggctacgtggagtacatcaccaacagcatccactcccgggagatcttc
cactcgctgtccatctccttctcccgctgctgggacttcctgctttggatggacccggcc
aatcacggaggggtgaagggcaagctgccctctggcgccctctgtggggaggacgcagct
ctcctgaagaagaagaagaggaagagcggtgaggacgcagaggaagacggcagtgaggat
gaggaagaggaggaggcgggcggggaggaagaggacctggacggggaggtggacgaggtg
gaggacctgattgagagcaactggaacatcatgcagtacctgccccagacggcctcctgc
cagaagtactttgtcatgatcgtctctgcgtacatcgcggcggtctaccacagcatgaag
gaggagcttcggcgcagcgcgccgggggctacgcccgtcaagaggcgggcggggggcagc
caggccacccagcaggcggccgaggagctgggggcgcttcctggtatgatctccttctcc
caggagtacgtggccaacgagctgacccagagcttcttcaccatcacccagaagatccag
aggaagctggcggccacgcgcagcgtcacccagccctcggagatgttccccaccctgccg
ggctcccacctgcccctcaacaaccccgccctggagttcatcaaatacgtctgccaggtg
ctctccctggacgccaacatcaccaaccaggtgaacaagctgaagagggacctgctgcgg
ctggtcgacgtgggcgagttctcggagcacgcccagttcagggacccctgtaactcctac
atcctgccagaggtcatctgccacagctgcaacttctgccgagacctcgacctctgcaag
gaccccacactggcccaggacggctcagtcctgccgcagtggttctgctctaactgccgg
gcgcagtacgagacggagttcatcgagacgtccctggtggaggcgctgcagaagaagctg
atgagcttcaccctgcaggacctggcctgtgtgaagtgtaagggtgtgaaggaggccaac
atgccgatctactgccgctgcgctgggagcttcgacctcaccttcacaaccaagagcttc
tcggagcagatcaaggtgttccgcagcatcgccgctcactacaacatggtcttcctggag
gagaccatcgattggctgctgaccatgagcccgcagatcaacctcagtgtgcactga
DBGET
integrated database retrieval system
