Gadus morhua (Atlantic cod): 115554094
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Entry
115554094 CDS
T10832
Symbol
snx18
Name
(RefSeq) sorting nexin-18
KO
K17923
sorting nexin-9/18/33
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115554094 (snx18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115554094 (snx18)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
115554094 (snx18)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115554094 (snx18)
Macropinocytosis
Sorting nexins
115554094 (snx18)
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115554094 (snx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_2
SH3_9
SH3_1
Vps5
XFP
Motif
Other DBs
NCBI-GeneID:
115554094
NCBI-ProteinID:
XP_030226569
Ensembl:
ENSGMOG00000007416
LinkDB
All DBs
Position
11:complement(24790557..24798895)
Genome browser
AA seq
582 aa
AA seq
DB search
MALKARALYDFNSENPGEISVKENEIVTLYSEQDIEGWFEGANSKGDKGLFPASYVEIVK
NDTASAAVVNNNNSSTSGHAPQGSRYANVSTGGFDASYQPPNKVESSSSPGYPGFSPPGQ
ASQHNVYPDTSQGSEDDWYDDWDDSSTVADEPPVGVARDFDVPSKYRVSSVPRGGAQQAK
SSATVGKNLNRFSTFVKSGGEAFVLGEAAGDVKDWDRLCVVMGQYGPQWQDNPYPFACTI
DDPTKQTKFKGMKSYISYKLTPTHTQTQVNRRYKHFDWLYARLVEKFPVISVPHIPEKQA
TGRFEEDFISKRRKGLIWWMDHMTSHPVLSKCDVFQHFLTCNSTDEKAWKLGKRKAEKDE
MVGANFFLTISTPVAPMDLQEVEIKIDGFKTFTKRMDEGSMQLNVTVSEFARKQISGFKK
EYQRVGQSFKILSQAFELDQQPYSVGLNRAISITGDAYEAIGDYFAEQPSKDLDPIMDLL
ALYQGHLANYPDIIHVQKGALTKVKESQKHVEEAKMEAPQAEGIKERCNIISFATMAEIQ
HFHQIRVRDFKTQMQQYLQQQIGFFQKVTGKLEEALQKYDDA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaaaagcaagagcactatacgactttaattcggagaaccccggagaaatatcc
gtgaaggagaacgagattgtgactctgtatagcgaacaggacatcgaaggctggtttgag
ggagccaacagcaaaggggataagggattattccctgcgtcctacgtggagatagtaaag
aacgacaccgcgtccgccgctgtcgtcaacaacaacaacagcagcacatctgggcatgct
ccccagggctctcggtacgccaatgtatccaccggaggcttcgatgcctcatatcaacct
ccgaataaagttgagagctcttcatctccgggataccccgggttctcacccccgggtcaa
gcatcacagcataacgtctatcccgacaccagccaaggcagtgaggatgattggtacgat
gactgggatgacagctccacggtggccgatgaaccaccggtcggagtcgctcgggatttt
gacgtaccttcgaaatacagggtgtcctcggtgccgagaggcggtgcacagcaggcgaaa
agttccgccaccgtcggtaagaatttgaacaggttctccacctttgtgaagtcaggaggc
gaagcgtttgtgctgggggaagcggcgggcgacgtgaaagactgggacagactctgcgtg
gtgatgggtcagtatggcccgcagtggcaggataacccctacccgtttgcctgtaccatc
gatgaccccactaagcagaccaagtttaaaggtatgaaaagctacatatcttacaagctg
acaccaacgcacactcaaacccaggtgaacagaaggtataagcactttgactggctttac
gcccgcctggtcgagaagttccctgtcatctccgtgccgcacatccccgagaagcaggcc
accgggcgcttcgaggaggacttcatctccaagaggaggaagggcctcatatggtggatg
gaccatatgaccagtcaccctgtgttgtccaaatgcgacgtgttccagcactttctcacc
tgcaacagtacggacgagaaggcctggaagctgggcaagaggaaagctgagaaagatgag
atggtgggcgccaacttcttcctcaccatcagcacccccgtcgcgcctatggacctccaa
gaggtggagattaagatcgacggcttcaagaccttcactaagcggatggacgaaggatcc
atgcagctgaacgtcaccgtcagcgagttcgcccgcaaacagatcagtggttttaagaag
gagtaccagagagtgggccagtcctttaagatcctcagccaagcctttgagttggaccag
cagccgtactctgttggacttaaccgagccatctccatcactggggatgcctatgaggcg
attggggactattttgctgagcagcccagcaaagatcttgatcccatcatggatttgtta
gcactttaccagggccacctggcaaactacccagacatcatccacgtccagaaaggtgcc
cttacgaaggtgaaggagagccagaagcacgtggaggaggcaaagatggaggccccgcag
gcggaaggcatcaaggagcgctgcaacatcatctcctttgccaccatggcggagatccag
cacttccaccagatccgcgtgcgcgacttcaagacccagatgcagcagtaccttcagcag
cagatcggcttcttccagaaagtcacgggcaagctggaggaagccctgcagaagtatgat
gacgcctag
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integrated database retrieval system
