Gadus morhua (Atlantic cod): 115554242
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Entry
115554242 CDS
T10832
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Proteoglycans [BR:
gmh00535
]
Cell surface proteoglycans
Others
115554242
Lectins [BR:
gmh04091
]
C-Type lectins
Others
115554242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115554242
NCBI-ProteinID:
XP_030226760
Ensembl:
ENSGMOG00000007426
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All DBs
Position
11:24755186..24781220
Genome browser
AA seq
2408 aa
AA seq
DB search
MESVVRSTKKLCLWGLLWWSLILELALGASFYGDGFVHLKAAESSERNVLRLRFRTSSAA
GLLFLAAGRADHFLLELHAGRLQVKLDLGSGEGLLNSERGTQLNDLAWHSVEVHQEQSNV
TLTVDRNSHTFLTMPGPRHDLDADDGLFVGGSGGLDKPYLPADLPGFRGCVEEVVFNDHD
LLSSLRPLTGIKSVHEVSLGCSPQFFATEEDPVSLFSSKAYVSLPLWSAQQEGQFECVVH
TAAAEGIVLYSAARGGDFVAVEIQEGLPVAMVGKGGTKTEVRSLTSVNDRKWHSVKLYFN
AKSLQLTVDEEVVKTNIGSRLKVLQLKGSLFVGGIDDSTRAEVRKVGLLSVSGKRVRGGS
FKGCLKDIKVNGVKTGLSKAIVTKDISVGCEPEKEPEQSTTVRPTTVGVPSVTPRPALPM
STLARGLDKRYGSNFVLLKNLVVPEGGRASLESKHIKINLDFKSLGIRQSQIMFKIQEQP
THGQIRLDVDQEDQGENSFSMLDLWHERVMYIHGGSEDQEDFFMFSIFSSSRKPVPNYLK
GNKLYRYNVTVTPTNDAPELSLPEGNLFVLLENSRKHLTTDVLKASDVDSNSTDLVFSVL
GNLNADAGYLEIETNPGSAVTSFSHTDLAELKLYLVHRGVRNSRIVFRVSDGERVSNTVV
LRVMAIALEYKIANNTGLEITQGEHASIGSKQLAVQTNTVKQAVDIRYDAVEPPQYGELQ
RLHSSGEWRSTDSFTQRLLEKERLRYLSTFREIQTSAATDYFKCKVTIAGRATTELLFPI
TVKWVRFNLVRNVMAAINKVRKVTLDSESLYATAEGVVLAEGELYYRVLSTPKKGKLLFH
DTVLRKNATFSQRNVTDLQVRYELVDRPYEDTNDSFKFLLFSKHAQSKSFDYNISIKADI
NNVFMKNNGLSLLEGESKLITKDELFAETLSTKDVYYTVTDSPKHGKLARISQSNSNSSY
NKIITFSNQDILEERIMYIQDDSEATQDGFTFIASTSSEFKSSVAEDEIGSKEGTFNISI
QLVNDQKPVRVIDNVFNVVREGQRLLTSEDLRYHDADSDFDDGQLLYTRRGIPMGDLVLA
NDTSHRLFQFRQRDLVEKRVLFVHRGVSTGRFVLFVSDGKHFVSSLLDINAHDPFLRVAN
NTGLLVQKGHSVTFSTANFSVVSNLDIRDDSEVLFGLKQAPKYGSLYQKETKAVSFTLHD
LKSGFITYRHNDSGHVADSFNLTVQSKGLTVTARVHVKVYLESHQRPPIVQNNNMLLVEE
GKPVKIDETKLEVTHEDNLPAEIVFTVRETPAHGFLRRFEESRERYVGTRQSPAATFSQE
DVNAGNVQYVQAEPDQVNDMFVLDATNGVTEVTGIRVSLDIVPRLIPLKVSNFTLNEGGS
KALTQEVLRVTNRHFSGINFLFSVTEPPLHGRIEHSRSPGVDISSFTRRQVEHEFIYYIH
DGGESLDDSFTVTANDTVLRKQSLPGTVHIQVAAVNDEAPIITANRVLRVWVASVTEIRP
GDMRAEDEDTPPEELAFMVTPPSNGHLALKSAPMRPVLNFTQATIEQGQLLFVHKGAMSG
GFNFQVNDGVNFSPRQIFSITASALLLSLETNQALKVFPGSSTPITTENLQAVTNDNSKH
SNRSITFNVIRRPKLGRLVTVQPDNSTFDLSTFTQDMVDRKEVVFIQTPGESVGWAAMDS
MTFSVASQPAILDTQTFKIDISYENRGPQQKTVLIANTGAVVTEGESVAIDKSNLDASNL
MTKLPIPERSSHEVWFQVKALPQHGVILVGERNLTKEKPNFSQFIVNKYGITYKHDNSES
TQDLFVFDIWVNPKGKTAQRPIEDKDVVEEQFNITIIPVNDQSPVLKTKAPSLTVIQGDK
VALGPKNLRVEDLDNPAAEVQFSVVSQPNNGYLALEGSLNDTIMAFTQAQIDNGSIYFIH
DGSSASGVFYFSVTDGHHKPVYKLFNIDVRAITITLVNNTGLKLEQSKTTVSLSQDNLAA
ATNGKNTTVHYRITRPPDFGKLLKDGQEVTQFDQEDLRAGTLLYQSTSLLSGEDSFDFLA
FTSEANLTDQVLNITVEPLIQFGSGVRIPNGIPVTMTTSFLDASELANISDSEPLFQVVS
QPKYGKVVRTRLKNSGRGLLAETFTFEDVRKGQVSLEISANMTGIQELNDSLVFVLKAAN
IQPAKGEFYFTVVPYDPTNFSTTKTPILATTTFVHRTLNQTSQNGTAVPASANTLFSTMQ
PSSKNQQKFKGRNRWGIASNRTTLLGTTLGKPARGTVEIPYRNTPVRVESYPQKTSNPLL
VILPLLALLLLVILFVVMVLLLRRHRRRKQTPVTSKPPPSSIPLGSRPTYQGQPQKSLTI
PTVTVTPLSPSCPSSPVIDRLLALNQGSIYGTLDSSAPSHAWTNVVPVATAHIIRTTTPS
LQRNQYWV
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgtcgtgagaagcaccaagaagttgtgtttgtggggtctgctgtggtggtcg
ctgatcttggagctggcattgggggcctccttctacggggatggcttcgtgcatctcaag
gcggcggagtcgtccgagcggaacgtgctgcgccttcgtttccggacctccagcgccgcg
ggcctgctgttcctcgccgccggccgcgcagaccacttcctgctggagctccacgccggg
cgcctgcaggtcaaactggacctggggtccggggagggactgctgaactccgagagaggc
actcagctcaacgacctggcctggcactcggtagaggtccaccaggagcagagcaacgtc
actctgaccgtggacaggaactcccacaccttcctcaccatgccggggccgcgacacgac
ctcgacgcggacgacggcctcttcgtcggaggctcggggggtctcgacaaaccctacctt
cctgccgatctgccgggcttccgtggctgcgtggaagaggtggtcttcaacgaccacgac
ctgctgtcatcgctgaggcctctcaccgggatcaagagcgtccatgaggtgtcccttggg
tgcagcccccagttctttgccacggaagaggacccggtcagcctcttcagctccaaggcc
tacgtctctctgcccctttggagcgcccagcaggaagggcagtttgagtgtgtcgtgcac
acggccgccgcggagggcatcgtgctgtacagcgcggcccgaggcggagattttgtcgcc
gtggagattcaggaaggcctgccggtggccatggttggtaaaggtggaaccaagaccgaa
gttcgctcgctgacttcggttaacgatagaaagtggcattccgttaaattgtacttcaac
gctaaaagcctccagcttactgtggatgaagaggtcgtgaaaaccaatattggatctcgc
ttaaaggtgcttcagctgaaggggtcgctgtttgtcgggggcattgatgacagcaccagg
gcagaggtcaggaaggtaggcctgctctctgtgtctgggaaacgtgtgcgaggaggatcc
ttcaagggatgtttaaaggacatcaaagtcaatggcgtcaagactggtctttccaaggct
atcgttaccaaagatatatcagttggctgtgagccagagaaagaaccggaacaatcgacc
acagtgagaccaaccaccgtcggagttccttcagttacgccaaggccagcacttcccatg
tctacacttgcaagagggttggacaaacgctacgggtccaactttgtgctcctgaaaaac
cttgtggttccagaaggaggcagggcctctcttgagtcgaaacacatcaaaattaacctg
gacttcaaaagccttgggattcgtcagtctcaaattatgttcaaaatacaagaacagcca
acccatggtcagataaggctggatgttgaccaagaagaccagggggagaactcctttagc
atgcttgacctttggcacgaacgggtcatgtatatccatggaggatcagaagaccaagag
gacttcttcatgttttccattttttcaagcagtaggaagccagttcccaattacctgaag
ggaaataaattgtatcggtacaacgtaaccgtaacccctaccaatgacgctcctgagctg
agtctgcctgaaggaaatctctttgttctcttggaaaactcaaggaaacacttgaccaca
gacgttttgaaagcttccgatgttgacagcaactccactgatctcgtcttctccgtgctg
ggaaacctcaacgcagacgctggctatttggaaatcgagaccaacccgggctcggcggtg
acgtcgttctctcacacagacctggcggaactgaagctgtacctcgtccaccgaggggtg
aggaactcgaggatagtgtttagagtcagcgacggagagagggtcagcaacacggtggtc
ctgagagtcatggccatcgccctggagtacaagatcgccaacaacacgggcctggaaatc
acccagggagaacacgcctcgattggatcgaagcagttggccgtgcagacgaacaccgtg
aagcaggctgtggacatccgatacgacgccgtggaacccccccagtacggggagctacag
aggctgcactccagcggagagtggcggtccaccgactcgttcacccagaggctcctggag
aaagagcgcctccggtatctaagcaccttcagggagatccagacgtctgctgcaacggac
tacttcaagtgcaaggtcaccatcgccggcagggccaccacagagctgctgttccccatc
acggtgaagtgggttcggttcaacctggtgaggaacgtaatggcggccatcaataaagtg
agaaaggtcaccttggattcggagagtctgtatgccacggctgaaggcgtggtcctggca
gagggagagctgtactatagggtcctcagcacgcccaagaaagggaagctgttgtttcac
gacacggtcttgaggaagaacgccacgttcagccagaggaatgtgacggacctgcaagta
cgttacgagctggtggacaggccatatgaagataccaatgacagctttaagtttctcctc
ttttcaaaacacgcccagtccaagagctttgattataacatatctattaaagcagacatt
aataatgttttcatgaagaacaatggactgtcccttttggaaggagaaagtaaattgatc
acaaaggatgagttgtttgcggagaccttgagtacaaaggatgtttactacactgtcacc
gatagtccgaaacacggaaaactagcccgtataagtcagtcgaactccaactctagctac
aacaagatcatcacattcagtaaccaggacattttagaggagcgtataatgtacatccaa
gacgacagtgaggcgacacaggacggcttcaccttcatagcttccacaagttcagagttc
aaatcttccgtcgcagaggatgagatcggttccaaagagggcacgttcaacatatccatc
cagctggtcaacgaccagaagcccgtacgggttatcgataacgttttcaacgtggtgaga
gagggccagaggttgctcacctccgaggacctccgttatcacgacgccgactcagacttt
gacgacggccagttgctctacacccgccgtgggatccctatgggagacctggtcctggcc
aacgacacctcccatcggctcttccagttccgccagcgggatctggtggagaagcgagtg
ttgttcgtccacaggggcgtgagcaccgggcgctttgtgctctttgtgtcggacgggaaa
cactttgtctccagcctgttggacatcaacgcccacgaccctttcctgagagtggccaac
aacaccggcctcttggttcaaaagggccactcagtgacgttttcaaccgctaactttagc
gtagtttcaaacctggacatcagggatgattctgaggtgctcttcggtctcaaacaggcc
ccgaaatacggaagtctttatcagaaagagacgaaagcggtgtcgttcacactgcacgat
ctcaagagcggcttcatcacctatcgtcacaatgacagcggtcacgtggcagactctttc
aacttgacggtgcaatctaaaggtctgaccgtaacggcaagggtccatgtcaaggtttac
ctggagagccaccagaggcccccaatcgtgcagaacaacaacatgctgctggtggaagag
ggcaagccggttaaaattgacgagactaaacttgaggtcactcacgaggacaacctccca
gcggagatcgtgttcacagtgagggagacgcccgcgcacggcttcctgcggcgctttgag
gaatccagagagcgctacgtgggaaccaggcagtccccggcggcgacgttctcccaggag
gacgtcaacgcggggaacgttcagtacgtgcaggcggaacccgaccaggtcaacgacatg
ttcgtcctcgacgccaccaacggggtcacggaggtcacgggcatcagggtgtctttggac
atcgtccctcgcctcatccctctgaaggtgtccaacttcactctgaacgagggcggctcc
aaggccctgactcaggaggtgctcagggtcaccaacaggcacttctcgggaatcaacttc
ctgttcagtgtgacggagccgccgctccacggtcgcatcgagcactctcgctccccaggg
gtggacatcagctccttcacccggcggcaggttgagcacgagttcatctactatatccac
gacggcggcgagtccttggacgacagcttcacggtcacggccaacgacactgtcctgagg
aagcagagcctgccgggcacagtgcacatccaggttgcagctgtcaatgatgaggcgccc
atcatcacggctaacagggtcctgagggtgtgggtggcctctgtgacggagatcagaccg
ggggatatgcgggcggaggacgaggacacgcccccagaggagctggcgttcatggtgact
ccgcccagcaacggtcacctggcgctgaagagcgcccccatgaggccagtgctgaacttc
acccaagccacgatagagcagggtcagctgctgttcgttcacaaaggcgccatgtctggc
ggcttcaacttccaagtgaacgacggcgtgaacttcagcccgcggcagatcttcagcatc
acagccagcgctctgctgctcagccttgagaccaaccaggccctcaaggtgtttccaggc
tcttcaacaccaatcacaacggagaatttgcaagcagtgaccaatgacaacagcaaacac
tcaaaccgcagtattactttcaatgtgattcgtcgtcctaaactcgggaggctggtgacc
gtgcagcctgataattctacattcgatctctccacattcacacaggacatggtggacagg
aaggaggttgtcttcatccaaacgccaggggagtcagtaggctgggcagccatggactca
atgaccttctcagtggcatcgcagcccgctattctagacacccagaccttcaaaatagac
atttcctatgaaaaccgcgggcctcagcaaaagacagtcctcattgccaacacaggtgct
gtcgtaacagagggggaaagcgttgccattgacaagtccaacctggacgcctctaacctc
atgactaagctgccgatcccggagcgaagctcccacgaggtctggttccaggtcaaagct
ctaccccaacacggtgtcattttggtaggcgagagaaacctaaccaaggagaaacccaat
ttctcccagttcatcgtcaacaaatacggcatcacctacaagcacgacaactctgagagc
acgcaggacctcttcgtctttgacatatgggtaaatcccaagggcaagactgcacagcgc
cctatagaggacaaggatgtggttgaggagcagttcaacataacgataatacctgtgaat
gaccaatcaccagttctgaagaccaaggcccctagcttgacggtgatacaaggtgataaa
gtggcacttgggcccaagaaccttcgagtggaagacttggacaatcctgctgctgaggtc
caattttctgttgtaagtcaacctaacaatggctaccttgctcttgaaggaagtctaaat
gatacgatcatggccttcactcaagcccaaatcgacaatggaagcatttacttcatccat
gatggaagttctgcttcaggggtgttctatttcagcgtgaccgatggccaccacaagcca
gtctacaaactgttcaacattgacgtaagagccatcacaattactttggtcaacaacact
ggtttgaaactggagcaaagtaagactacagtttcactgagccaagacaatctggccgct
gcaaccaacggtaaaaacaccacagttcactacagaattacaagacctccggattttggg
aaacttctaaaggacggtcaagaagttactcagtttgaccaggaggatttacgggccgga
acgctgctctaccaatcaacatctctattatctggagaagacagctttgatttcttagcc
ttcacctctgaagccaatctcaccgatcaagtgctcaacatcactgtcgaacctttaatc
caatttggcagtggggtaaggattcctaacggcatccctgtcaccatgacaacttccttt
ctggatgcctctgagcttgctaatataagtgacagtgaaccactctttcaggtggtctcc
cagccgaaatacggtaaggttgttcgaacaagactgaaaaactctgggagaggattacta
gcggaaacatttacatttgaggatgtgaggaagggacaggtgtctttagagatcagtgca
aacatgactggcattcaagaacttaatgactccctcgtgtttgtcttaaaagctgcgaat
atccaacccgcaaaaggagagttctacttcactgtggtgccatatgatccgacaaatttc
tccaccacaaaaacaccaatcctagccacgactacatttgtccatcgcaccttaaaccag
acctctcaaaatggaacagctgtgccagcctctgcgaacaccctcttttccaccatgcaa
ccgagcagcaagaaccagcagaagttcaaaggacgcaatcgctgggggattgcgtcaaac
cggactacccttttgggtacgactctagggaagcctgcccggggaacagtcgagattccc
tacaggaacacaccggtccgcgtagagtcctatccacagaaaacgtccaacccactgttg
gttatcctacctctgctggccctgctgctactggtcatcctttttgtggtgatggtcttg
ttgcttcgacgtcaccggcggaggaagcagacgcctgtgacctcaaagccccctccctcg
tccatccctctaggctccaggccgacctatcagggacagcctcagaaaagcttgacaatt
cccacagtgacggtcactccgctgagcccgagttgccccagtagtcctgttattgatagg
ttgctggcactcaaccaagggtccatctacggcactcttgattcatctgcgccttcacat
gcttggactaatgtcgtgccagtagcaactgcccacatcattagaaccacaacaccaagt
cttcagaggaatcagtattgggtatga
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integrated database retrieval system
