KEGG   Gadus morhua (Atlantic cod): 115554246
Entry
115554246         CDS       T10832                                 
Symbol
sncaip
Name
(RefSeq) synphilin-1
  KO
K04558  synphilin-1
Organism
gmh  Gadus morhua (Atlantic cod)
SSDB
Motif
Pfam: Ank_2 SNCAIP_SNCA_bd Ank_4 Ank Ank_5 Ank_3 23S_rRNA_IVP
Other DBs
NCBI-GeneID: 115554246
NCBI-ProteinID: XP_030226763
Ensembl: ENSGMOG00000036642
LinkDB
Position
11:30409321..30424486
AA seq 802 aa
MEAPEYLDLDEIDFSDDAVYSVPSAKNIPELSRRSEVLGEERAAPPGTWSRSGPSNGVGG
GVKPAGLSEVHSKFRPVKRVSPLKHQPEDPHSDSEGKAPGNGEAPGNTGAPGSPGGAPGE
TKEEPDKPGHAPSSEGPGGRGAEAPPLGAALLGELEHYDLDMDEILDVPYLKSSQQASTL
PRPPAPRAPPPSGLGGTLDRKHGARRPGAGLHHEALSLAGYNQYSMSPVKWSDLKKSKSM
DPDHLQVHGLSAASTAQRELSSAGLLSCSTSLSSFSDPDKLLSARVYPETGLKVGLDPPC
SAGLLFPPAGSSAARPWAPTGGATARGGGGEVDEETKKNQNIINIIREGQISLLPHLAAD
NLELILDEEGNNLLHLSAAQGHTDCLQHLTSLMGEDGLNDRNAQQLTPAGLGVKHGHLEC
VRWMVSETEAIAELSCSRDHPSLIHYAGRHGQEKVLLWLLQFMQEQAISLDEVDQQGNTA
VHIAAQHGHLTCLQTLVEYGSNVTVLNLQGERPSQCAERQGHTTCARYLVVVETCMSLAS
QVVKLTKQLNEQASERLALQNQMQRILDPNTSSPSSHQPSLGAWPEMTLTAEGTPEEGHW
VVRQGGVAPASVLGLLGKEPPVERRELKLARLKQLMQRSLSESDSDGYPPEEGRAPRHLP
LAEGDPGRRAPGPSPPEADPDQKATSPKSALKSPSSRRKPPHSLKLRVTFHESPAPQEPG
AAKVHHGKERTPTGGSEGKRPFGAFRSIMETLSGNINNHNNNSSSQSGARHSTSCPGSPG
RKSEIKAGPSGGGKAKTKTSNV
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggaagctcctgaatatctggacttggatgagatcgacttctctgacgatgctgtgtat
tctgttccgtccgccaagaacattccagagttgtcccggagatctgaagtcctcggagag
gagagagcagcgccccccggcacctggagccgctcagggccgtccaatggcgtgggaggg
ggggtcaaacctgcaggcctctctgaggtccacagcaagttcagaccggtgaagagggtc
tcccccctgaagcaccagccggaggacccccacagcgactccgaggggaaggcccccggg
aacggcgaggcccccgggaacactggggcccccggcagtcccgggggggccccgggggaa
accaaggaggagccggacaagccgggccacgccccctcctcggagggtccgggcgggcgg
ggtgcagaggccccgcccctgggcgccgccctgctgggggagctggagcactacgacctg
gacatggacgagatcctggacgtcccgtacctgaagagcagccagcaggcctccacactg
ccccggccccccgccccgcgggcccccccgccctccggcctggggggcacactggaccgt
aagcacggggcccggcggccgggggccggcctgcaccacgaggccctcagcctggccggc
tacaaccagtactccatgtctccagtcaagtggtccgacctgaagaagtccaagtccatg
gatccagaccacctccaggtccatgggctgtccgcagcctccacggcccaaagagagctc
tcctctgccgggctgctcagctgctccacctccctgtcttccttctccgacccagacaag
ctgctctcagccagagtgtacccagagaccggcctcaaggtggggctggaccccccctgc
agcgctgggctcctgttcccccccgccgggagctctgctgccaggccctgggcccccact
gggggggccacggccagaggaggggggggggaggtggacgaggagaccaagaagaaccag
aacatcatcaacatcatccgagagggacagatctccctgctgccccaccttgcggctgat
aacctggagttgatcctggacgaggagggcaacaacctgctgcacctgtcggcggcccag
ggccacacggactgcctgcagcacctcacctcactgatgggggaggacggcctcaacgac
cgcaatgcccagcagctcaccccggcaggcctgggggtgaagcatggccacttggagtgt
gtgagatggatggtgagtgagacggaggcgatagccgagctgagctgcagtcgggaccac
cccagcctgatccactacgctggccgccacggacaggaaaaggtgttgctatggttactg
cagttcatgcaggagcaggccatctctctggacgaggtcgaccagcaggggaacactgcg
gtccacatagcggcccagcacggacacctcacctgcctccagacacttgtggagtacggc
tccaacgtgacggtgctgaacctgcagggggagcggccctcccagtgcgccgaacgacag
ggacacaccacctgcgcacgttacctggtcgtcgtggaaacctgcatgtccttggcctcc
caggtggtcaaactcacgaagcagcttaatgaacaggcctcagagcgattggcgctgcag
aaccaaatgcagagaatactagatccaaacacatcgtctccaagttcccatcagccctcg
ctgggggcgtggcctgagatgacgctgacggcggaggggactccagaggaaggtcattgg
gtggtgcgccaggggggtgtggctcccgcctcggtgctaggactcctgggaaaggagcct
ccagtggagaggagggagctgaagctggcccgcctcaagcagctgatgcagcgctcgctc
tccgagtccgactcggacgggtaccccccggaggagggccgggccccccgccacctgccg
ctggcggaaggggaccccgggcggcgggcccctggcccctcccccccggaggccgacccg
gaccagaaggccaccagccccaagagcgctctgaagtcgccgtcctcgcgccgcaagccc
ccccacagcctgaagctccgggtcaccttccacgagagccccgccccccaggagccaggg
gccgccaaggtgcatcatgggaaagagaggactcctacgggcgggtcggagggcaagcgg
ccgttcggagccttcaggtccatcatggagactctgagcgggaacatcaacaaccacaac
aacaacagctctagccaatcaggagctagacactccacttcctgtccaggctcaccgggc
aggaagtctgagatcaaagccggtccctctggaggaggcaaggctaagacgaaaaccagc
aacgtttga

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