Gadus morhua (Atlantic cod): 115554432
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Entry
115554432 CDS
T10832
Symbol
itga8
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8
KO
K06584
integrin alpha 8
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04510
Focal adhesion
gmh04512
ECM-receptor interaction
gmh04514
Cell adhesion molecules
gmh04810
Regulation of actin cytoskeleton
gmh04820
Cytoskeleton in muscle cells
Brite
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin alpha subunits
115554432 (itga8)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115554432
NCBI-ProteinID:
XP_030227043
Ensembl:
ENSGMOG00000013533
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Position
11:1009852..1076152
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AA seq
1052 aa
AA seq
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MSVWDCLSVSPRSFRGCVFVLWSVFSTVWSFNIQADRPAVYRGPGGSYFGYSVDFYQATA
ESNTMSVLVGAPKANTSQPGIVEAGAVYYCPWPGGADSCRQIPFDNANNRMIKVNGSREP
LEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGERDPVGTCYVAVQNFSAYAEYSPC
RTNDPDPEGQGFCQAGFSVDFTKEGRLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAVLR
RVPGEKHTSAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAMINSTNLT
FIQNFSGEQMASYFGYSVAVADLNGDGMDDVLVGAPLYMEREMESKPREVGRVYLYLQLA
PLTFSQPIPITGTYTFGRFGTAIATLGDINQDGFNDVAVGCPFGGDDRGGRVLIFNGRRD
VAARGLALSQELRAAAPAAGGLPGYGFTLRGGHDLDNNHYPDLIVGAFGVGEISVYRARA
VVFVDAWMVLTPKILNADDRQCVLPDTDFMVTCLKVKVCAAVSGVGIPDSVDLTVELQLD
WLKGTRGGAKRVLFLDNQQHQRTTLLKLGHHHPHKCFTYTVYLKEEDEFRDKLTXISLAL
NYSLAQPTHSQDLPPVLNYYSSTFLQEQAYILLDCGEDNLCIPDLQLSASMDRPELVICD
ENLVMLTITVLNRGEGAYETELHATLPAEADYIGVERRVEGLSRLNCEYRLLNDSRMVVC
DLGNPMVSGTELLVGLRFSVQRLDDAAPRLAFKLQIHSSNKDNPDSNPVTLDLSVVARSQ
LDLRGVSHPSQVVLPFPRWEPKEKPLKEEDVGPQVTHIYELHNTGPSSIREAELQVGWPS
RFRDENLLYIMEIKTDGPISCRANGSLNPLGLQLSALQDTPELLGFLRNGSSRRHRRSVT
SEHDYSSKTLNCSNIICLQILCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYLLNSTV
SFMVTALPYRIQPTSLPHQSTSMGTLVLWGTPDVSFAVPLWVIILAILLGLLVLAMLTLV
MWKCGFFDRARPPVDDDISDREQLTSDQSADA
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtgggactgcctgagtgtttctcccaggtcgttccgaggatgtgtgtttgtg
ctctggtcggtgttctctacagtctggagttttaacatccaggcggaccgtcccgccgtt
taccggggacccggtgggagttactttggatactcagtggacttctaccaagcgaccgcc
gaaagtaacacgatgagtgttctggtgggggcccccaaggccaacacctcccagccaggt
attgtggaggcgggggccgtctactactgcccctggcccggcggggccgacagctgcaga
cagatacccttcgataacgccaataacaggatgattaaggtgaacggcagcagggagcct
cttgagttcaagtctcaccagtggttcggtgcgtcggtcagaacacacaaaggcaaagta
gtggcctgtgctcctctgtaccactggcggacggtgaagctgagtggggagagggacccc
gtggggacgtgctacgtggccgtgcagaacttcagcgcctacgcagagtactcaccctgc
aggaccaatgacccagacccggagggccagggcttctgtcaggcgggctttagtgtggac
ttcacaaaggaaggacgactggtggttggtgggcctggaagcttctattggcaaggtcag
gtgatgacagcagggattgctgagatactgaatggttactcgctgaaggcggtgctgaga
cgagttccaggagagaaacacaccagtgctgctgcagacacacacgacgacagctacctt
ggttactctgtggccgtgggagagttcacaggggactcggagcaagagctgattgccggg
gttcccagaggggctcagaactttggctatgtggcaatgatcaactcaaccaatttgacc
ttcatccagaacttcagcggagagcagatggcctcctactttggctactctgtggctgta
gccgacctgaacggggacgggatggacgacgtgctggttggcgcgccgctctacatggag
agagagatggagagcaagccccgggaggtgggccgcgtgtacctgtacctccagctggcc
ccactcaccttctcccagcccatccccatcacagggacctacaccttcggacgcttcggc
accgccatcgcaacgctgggagacatcaaccaggacgggttcaatgacgtggcggtgggt
tgtccgttcggcggggacgaccgcggtggccgtgtcctgatcttcaacggccgcagagac
gtggctgcccggggcctggccctgagccaggagctgcgagcggcggcgcccgcggccggg
ggtctgcccgggtacgggttcaccctgagagggggccatgacctggacaacaaccactac
cctgacctgatagttggggcgttcggagtgggggagatttccgtttacagagcccgtgct
gtggtgtttgtagatgcttggatggtcctgacgcccaagatcctaaacgctgacgaccga
cagtgtgttctacctgacaccgacttcatggtcacctgccttaaggtgaaggtgtgtgcg
gctgtgagtggcgttgggatccctgactccgtggacctgacagtggagctgcagttggat
tggctgaaaggaaccaggggcggagctaagagagtcctcttcctggataaccagcagcat
cagcgcaccacacttctcaagctgggacatcaccacccacacaagtgcttcacctacact
gtgtacctgaaagaggaggacgagttcagagacaaattaactncgatctcattggctctg
aactacagcctggcccagcccactcatagccaagaccttccacctgtccttaactattac
agcagcaccttcctccaagaacaggcctacatcctgctggactgtggcgaggacaaccta
tgtatccctgacctccagctctccgccagcatggaccgaccggagctggtgatctgcgat
gagaacctggtgatgctgaccatcacagtgctgaaccggggggagggggcgtacgagacg
gagctccacgcaacacttcctgctgaggctgattacataggagtggagcgcagggtggag
ggtctgtcccggctgaactgtgagtaccggctcctcaacgactccaggatggtggtgtgt
gaccttgggaaccctatggtttctgggacagagttgttggttggtctgcggttttctgtt
cagaggctggacgacgccgccccaagattagccttcaagcttcagatccacagctccaac
aaagataaccctgacagcaaccccgtcacgctggacctctccgtcgtggcccgctcacag
ctggacctcagaggggtgtcccacccctcccaggtggtgttgcccttccctcgctgggag
cccaaggagaagcccctcaaagaggaggacgtggggccacaagtcacgcacatttacgag
ctccacaacactggtcccagcagcatccgggaggcggagctccaggtgggctggccctcc
cgtttccgtgacgaaaacctgctgtacattatggagattaaaactgatgggccaatcagc
tgcagggctaacggcagcctcaacccgctgggcctacagctctctgccctccaggacacc
cctgagttgttaggtttcctgaggaacggttcctctcgtcgccacagacgctcggtgacc
agcgagcacgactacagcagcaagacactgaactgcagcaacatcatctgcctgcagatc
ctgtgtgtggtggggcgtctggaccggggtcagagcgcggtggtgaagatccgctccagg
ctctgggctcacaccttcctacagcggcgtaatgacccctacctcctgaactccaccgtc
tccttcatggtaaccgccctgccctaccgcatccagcccacaagccttccccaccagagc
acctcgatggggaccctggtgttgtgggggacacctgacgtgtctttcgctgttccattg
tgggtcattatcctggccatactgctgggactgctggtgctagccatgcttacgctagtc
atgtggaagtgtggcttctttgatcgagcacgacctccggttgatgatgacatcagcgac
cgggagcagctcacatctgaccaatcagcagatgcctga
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