Gadus morhua (Atlantic cod): 115554476
Help
Entry
115554476 CDS
T10832
Name
(RefSeq) synaptic vesicle glycoprotein 2A-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115554476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115554476
Transporters [BR:
gmh02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
115554476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
MFS_2
MFS_4
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
115554476
NCBI-ProteinID:
XP_030227089
Ensembl:
ENSGMOG00000009975
LinkDB
All DBs
Position
11:9945865..9987461
Genome browser
AA seq
742 aa
AA seq
DB search
MEDDGRYRDGRSDFIRGAKDIAKVAKKQVGKKMGRGADKMADEYTKRSYKRFEEEDDDDD
YGGAPGNDAGYHRNDSRAANDEDEDAAGHSDSTEGHDEDDEIYEGEYQGIPRADSGGKPG
GADGLGAGQAPFRDLSAYEAERRKDQEELAQQYETILQECGHGKFQWTLYFVLGLALMAD
GVEIFVVGFVLPSAEKDMCLSEPNKGMLGLIVYLGMMVGAFVWGGMADRIGRRQTLLISL
SINSVAAFFSSFVQGYSSFLFCRLASGVGIGGSIPIVFSYYSEFLAQEKRGEHLSWLCMF
WMIGGIYASAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCALPSVAAICALTTMPESPR
FFLENGKHDEAWMILKQVHDTNMRAKGYPERVFSVTTIKTVKQMDELVDMGESLAWHQKW
RMKLSALFHQVRGNFLAIFSPEYRRTTYMMMAVWFSMSFSYYGLTVWFPDMIKYLQKQEY
SSRTKTFTQERMEHVTFNFTLENQVHKKGQYFNDKFMNLKMKSMVFEDSLFEECYFEDIT
SSNTFFKNCTFIATLFYNTDLFKYRLINSRLINSTFLHNKEGCLLSDVSDDNNAYMVYFV
SFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVISCVSCFFLSFGNSESAMIALLCLFGG
ISIASWNALDVLTVELYPSDKRCTAFGFLNALCKLAAVLGISIFTSFVGITKAVPILFAS
GALAAGSFLALKLPETRGQVLQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgggcgctaccgggacggccgctcggacttcatccgcggcgccaaggat
atcgccaaggtggccaagaagcaggttggcaagaagatgggccgtggcgccgacaagatg
gccgacgagtacaccaagcgctcgtacaagcgctttgaggaggaggatgacgacgacgac
tacggcggggcgccgggcaatgacgcgggctaccaccgcaacgacagccgggcggccaat
gacgaggacgaggacgccgccggccacagtgactccaccgagggccacgacgaggacgac
gagatctacgagggcgagtaccagggcatcccgcgggctgactccgggggcaagccgggc
ggcgccgatggcctgggcgccgggcaggcccccttcagggacctgtcggcctacgaggcg
gagcggcggaaggaccaggaggagctggcgcagcagtacgagaccatcctgcaggagtgc
ggccacggcaagttccagtggacgctgtactttgtgctgggcctggcgctgatggcggac
ggcgtggagatcttcgtggtgggcttcgtactgcccagcgccgaaaaggatatgtgcctg
tcggagcccaacaagggcatgctgggcctgatcgtgtaccttgggatgatggtgggggcc
ttcgtgtggggcggaatggccgaccggattggccggcggcagaccctgctcatctccctg
tccatcaacagcgtggccgccttcttctcgtcctttgtccagggctacagctccttcctg
ttctgtcgcctggcctccggcgtgggtatcggaggctccatccccatcgtgttctcctac
tactctgagttcctggcccaggagaagaggggcgagcacctcagctggctctgcatgttc
tggatgatcggcggcatctacgcctccgccatggcctgggccattatcccccattacggc
tggagtttccagatgggctcggcctaccagttccacagctggcgtgtgttcgtcctggtg
tgcgccctgccctcagtggccgctatatgtgccctcaccaccatgcccgagagcccccgc
ttcttcctggagaacggtaaacacgacgaggcatggatgattctgaagcaggttcatgac
accaacatgcgggccaagggctacccagagagggtcttctctgtgaccaccattaagacg
gtgaagcagatggatgagctggtggacatgggggagagcctcgcctggcatcagaagtgg
aggatgaagctcagtgccttgttccatcaggtacgtggtaacttcctggccatcttctcc
ccagagtaccgccgcaccacctacatgatgatggccgtgtggttctccatgtccttcagc
tattacggcctgacggtgtggttcccagacatgatcaagtacctccagaagcaagagtat
tcgtcgcgcaccaagaccttcacccaggaacgcatggagcatgtcaccttcaacttcacc
ctggagaaccaggtccacaagaagggccagtacttcaacgacaagttcatgaacctgaag
atgaagtcaatggtgtttgaggactctctgttcgaggaatgctactttgaggacatcacc
tccagcaacaccttcttcaagaactgcaccttcatcgcaacccttttctacaacacagac
ctgttcaagtaccggctgatcaacagccgactcatcaacagcacgtttctgcacaacaag
gagggctgcctgctcagtgacgtcagcgacgacaacaacgcctacatggtgtactttgtc
agcttcctgggcactctggccgtgttgccgggcaacattgtctccgcgctgctcatggac
aagatcggaaggctgaggatgctggccggctccagtgtgatctcctgcgtcagctgcttc
ttcctgtccttcggtaacagcgagtcggccatgatcgctctgctctgcctgttcggaggc
atcagcatcgcctcctggaacgccctggacgtcctcacggtggagctctacccctctgac
aagagatgcactgcgtttggcttcctcaacgccctctgcaagctggccgccgtactgggc
atcagcattttcacctccttcgtgggcatcaccaaggcagtgcccatcctcttcgcgtcg
ggggccctggcggccggcagcttcctggccctcaagctgcccgagacgcggggccaggta
ctgcagtag
DBGET
integrated database retrieval system
