Gadus morhua (Atlantic cod): 115554583
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Entry
115554583 CDS
T10832
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115554583 (scap)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115554583 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40
WD40_CDC20-Fz
Patched
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_Nup120_160
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
115554583
NCBI-ProteinID:
XP_030227223
Ensembl:
ENSGMOG00000015915
LinkDB
All DBs
Position
11:complement(12482119..12516918)
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AA seq
1338 aa
AA seq
DB search
MYLMPGNALDIAVMESIGPGDAFKMGILGSVEKRSLDAPRRLFPGRAPLPPDGRQLTPPA
RMTLRERLRQKISAAFYHHGLLCASYPVPIILFTSASILTCCYPLLRLPLPGTGPVEFTT
AVRGYASPSHNPLGDPVERPDWYRGPPVAYIQQVLVKAAVSPWGSNLLPVDAFRPPLGQV
FTLLEEIRNHVHSDSSGVQSLEHLCLQVTDLLPGLRRMQTVLPEHGCLLVSPGNYWQNQQ
ELFDSDPDLLKTVQKHEPKGLHTSATLRDLLFGVPGKHTGVSHYSKKRVVTYTITIALST
YDAGFLGSLRARLKQLHPSANCSLGEEHMVHVHFKEEIGIAELIPLVTTYIILFAYIYFS
TRKIDMVKSKWGLALAAVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVL
VLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELCIILIGYFTLVPAIQEFCLFAV
VGLVSDFFLQMFFFTTVLSIDIRRMELADLNRRLPAEAGLPPPKPGPLRPREAPPPPRPS
PHTITLQTPAFRNLRLPKRLRVVYFLARTRLAQRIIMVGTVIWIGILVYTDPAGLRTYLA
AQVSEQSHLGDPGGGGGQPPHLGGMAPVFPGGDPAKALSVLPAREATPLPENQSQRHLAP
GRVQEQPRGPPAATQVPWGAEDEEGWRRLSFRHWPSLFSYYNITLAKRYISILPVIPVTL
HLGPQEAPETPRHPQDARLPPDPIPKFSSPDLQAADLTLYKVAALGLAAGVLLVLLLFCL
YRVLCPRNYGQNGVSHGRRRRGDLPCDDYGYSPPVSEISPLLLRGHSMDIECLASDGMLL
ASCCLAGQIRVWDAQTGDCLTVIPNHKLRRSSSSGCWEQRGASWDGAGGACDPESLGCEG
RDPCVGGDSASEDEGGGFPFRRHAPPLRPPLFTDQPDLTPLIDTNFDSRLPPSSVHAAPP
RGAAFDYGGLVERAYTEHEPPSPAAYPSPSYSSSPPTAGFANCRRSPVEAPDRGFACGPP
PAAEWEGSVWAMELRGNLIAAGRSSGKLQLWDAVEGSLRCSNEEGASGITALAFLNNRIV
AARLDGSLDFFTVELNKPPGLLQYRGAPGRGSMPPSPCYSSDDLISCQLTRSVLCAHQKP
ITVLRAAAGRVVTGSQDHTVRVYRLDDSCCLFTLQGHSGAITAIYIDETMVLASGGQDGA
ICLWDVLTGSRVSHVYGHRGDVTSLVCTNTCVISSGLDDLICIWDRSTGIKLYSIQQEVG
CGDSLGVISDSLLVTGGQGCVSFWDLNFGDLLQTVYLGQTSDGQGVRQLLVLDNAAIVCD
FGSELSLVYVPSVLEKLD
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatgccagggaacgctctagatatagcggtcatggaatctatagggccggga
gatgcattcaagatggggatactgggtagtgttgagaagaggtccttggatgccccgcgc
cgcctcttccccgggcgcgccccgctcccccccgatggccggcagctgaccccgcccgcc
aggatgacgctgcgcgagcggctcagacagaagatctcagcggccttctaccaccatggg
ctgctgtgtgcctcctaccccgtacccatcatcctcttcacctccgccagcatcctcacc
tgctgctacccgttgttgcggctgccgctgccggggacgggccctgtggagttcaccacc
gccgtcaggggctatgcctcgccttcccacaatcctctgggggaccctgttgaacggccc
gactggtaccggggtccgccggtagcctacatccagcaggtcctggtgaaggcagcggtg
tctccgtggggctccaacctgctcccggtggacgccttccgcccgccgctgggacaggtg
ttcaccctgctggaagagatcaggaaccatgtccactcagacagctctggggtgcagagt
ctggaacacttgtgtctccaagtgacagacctgttgccggggttacggcggatgcagacg
gtcctgccggagcatggctgtctgctggtgtcccccggcaactattggcagaaccagcaa
gagctcttcgactcggaccctgacctcctgaagaccgtccagaagcacgagcccaaaggc
ctgcacacctcggccacgctgagagacctgctgttcggggtcccggggaaacacactggg
gtcagccactacagcaagaagcgggtggtaacctacaccatcaccatagccctgagcacc
tacgatgcaggcttcttggggagcctgcgtgcgcggctaaagcagctccatccgtcggcc
aactgcagtctgggggaggagcacatggtgcacgtccacttcaaggaggagatcggcatc
gccgaactcatccccctcgtcaccacctacatcatcctgttcgcctacatctacttctcc
acccgtaaaatcgacatggtcaagtccaagtggggcctggccctggctgccgtggtaacg
gtcctcagctccctgctcatgtctgtggggctgtgcacgctgtttggtctgacacccacg
ctcaatggaggggagatcttcccttaccttgtggtggtcatcggtctggagaatgtgctg
gtgctcaccaagtctgtggtgtctacccctgttgacctggaggtcaaactacgcatcgct
cagggtctcagtaatgaaagctggtctatcatgaagaacatggctactgaactttgcatt
attctcattggctacttcacactggtcccggccattcaggagttctgtctgttcgctgtg
gtgggcctggtgtcagacttcttcctgcagatgttcttcttcaccaccgtgctctctata
gacatccgccgcatggagctcgccgacctgaaccgccgtctcccagccgaggcgggcctc
cctccccccaagccgggccccctgcggccccgggaggcccccccacccccgcggccctcc
ccccacaccatcaccctgcagacccccgccttcaggaacctgcggctgccgaagaggctt
cgcgtggtctacttcttggctcgcacccgcctggcccagcgcattatcatggtgggcacg
gtgatctggatcggtatcctggtgtacacggacccagccggcctgcgcacctacctggcc
gcccaggtgtcggagcagagtcacctgggggaccccgggggcggcggggggcagccccct
cacctgggcgggatggccccggtcttcccggggggggaccccgccaaggccctcagcgtg
ctgccggcccgcgaggccacgcccttacccgaaaaccagtcccagcgccacctagccccg
ggccgggtccaggagcagcccaggggcccccccgccgccacccaggtgccctggggggcg
gaggacgaggagggctggaggaggctgtccttcaggcactggccctcgctcttcagctac
tacaacatcacgctggccaagaggtacatcagcatcctgcccgtcatccccgtcacgctg
cacctcggcccccaggaggcaccggagaccccccgccacccccaggacgcacggctcccc
ccagacccaatccccaagttctccagcccggacctgcaggctgccgacctcaccctgtac
aaggtagcggctctgggcctggctgcaggcgtcctccttgtcctgctgctgttctgtctc
taccgggttctctgtccacgcaactacggccagaacggcgtctcccacggacgccgtcgc
cgcggcgacctgccctgcgacgactacggctactcgccgccagtcagcgagatctcgccg
ctgctgctgaggggacacagcatggacatagagtgtctggcgagtgacgggatgctgctg
gccagctgctgtctggcgggtcagatccgtgtgtgggacgcccagaccggagactgcctt
accgtcatccccaaccacaagctgaggcgcagcagcagcagtggctgctgggagcagcgg
ggcgccagctgggacggggcgggcggcgcctgcgacccggagagcctgggctgcgagggt
cgcgacccctgtgtgggcggggacagcgcgtcggaggacgagggcggcggcttcccgttc
cgccggcacgcgccccccctccgcccgcccctcttcacggaccagccggacctcacgccc
ctcatcgacaccaacttcgactcccggctgcccccgtcctccgtccacgccgccccgccc
cgtggcgccgccttcgactacggcggcctggtggagcgcgcctacacggagcacgagccc
ccctcgcccgccgcctacccctccccttcctactcctcctccccgcccacggcaggcttt
gccaactgtaggcggagccccgtggaggccccggaccggggcttcgcctgcgggcccccc
cccgcggcggagtgggagggctccgtctgggccatggagctccggggaaacctgatcgcc
gcaggcaggagcagcggcaagctacagctgtgggatgcagtcgaaggctcgctacgctgc
agcaacgaggagggagcctctggaataacagccctggccttcctcaacaacaggatcgtg
gccgcccggctggatgggtctctggacttcttcaccgtggagctcaacaaacctcctggg
ctgctgcagtacagaggggcccctgggcgtggctccatgcccccctccccgtgctacagc
agtgatgacctgatcagctgtcagctgacccgctcggtgctgtgcgcccaccagaagccc
atcaccgtgctgagggccgccgcgggccgcgtggtcaccggcagccaggaccacaccgtc
agggtttaccggctggatgactcctgctgcctgttcaccctgcagggccactccggagcc
atcaccgccatctacatagacgagaccatggtcttggccagtggggggcaagacggcgcc
atctgtctgtgggacgtcctcacaggaagtcgcgtcagccatgtgtatggtcaccgcggc
gacgtgacctccctggtctgcaccaacacctgcgtcatcagctcggggctggacgacctc
atctgcatctgggaccgaagtacgggcatcaagctgtactccatacagcaggaggtgggc
tgcggggacagtctaggggtgatctcggactccctgctggtgacggggggccagggctgc
gtgtccttctgggacctgaacttcggggacctgctgcagacggtgtacctgggccagacc
agcgacggccagggcgtccgccagctgctggtgctcgacaacgcggccatcgtctgcgac
ttcggcagcgagctcagcctggtgtacgtgccctctgtgctggagaagctggactga
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