Gadus morhua (Atlantic cod): 115554728
Help
Entry
115554728 CDS
T10832
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115554728
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115554728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
WHD_NOD2
LRR_NLRC3
LRR_CARMIL
LRR_6
LRR_MHP1-HER1-GIP3
HTH_NLRC5
LRR_4
ProRS-C_1
WHD_NACHT_C
PRAME_C
Motif
Other DBs
NCBI-GeneID:
115554728
NCBI-ProteinID:
XP_030227419
LinkDB
All DBs
Position
11:complement(28645110..28661017)
Genome browser
AA seq
843 aa
AA seq
DB search
MDIPVMFKDGNQSIEKRRIQQQRADSPGPSCVSMKSEWSMEQPLNFKDAIQSIEKRRVQQ
ERADSPGPSCVSMKSDRSMEQPLYFKDGNHQLSNERHQERSKVTSAQSVQQHQAEKEMNQ
VELADTLWDGSAAVECQHKIKSRLEKKSRCVFEGIAKAGQQTNLNYFYTELLITERGSGE
VNQEHEVRLIETASRKPAKKETLIRCEDIFKPLPGQDKPLRTIMTIGVAGIGKTVLTHKF
TLDWAEGKANHNIQFTFLLTFRELNLLNGKEFSLVELLHHFFIETKEAGICRFDRFQVVF
ILDGLDECRLPLDFQRNPIWRDVTKSTSVDLLLTNLIRGDLLPSARIWITTRPAAANQIP
AECVGMVTEVRGFTDPQKEEYFRKRFIEETLANTIISHIKKSRSLHIMCHIPVFCWITAT
VLEDFFKTSQIGEEMPKNVTDMYSHFLRVQSIQGGRKYHGRAETDPDWSSESRKIIVSLG
KLALNQLEKGHLIFYEADLAECDIDIKAASVYSGVFTQIFKEECGLYQDKVFCFVHLSIQ
EFLAALYVFMSFIDTGVNLFSGQPQTQQSKLYQSAVDKALMSENGHLDLVLRFLLGLSLE
SNAIVLQGLLRKTVSSSKSSEETVSYIKKKIGGDLSTERSINLFHCLNELNDRSLVEEIQ
QYLTSGRLSEDSLSPAHWSALVFILLSSEEVLDVFDLKKYSASEQGLLRLLPVVKASKTS
LLNGCQLSERCCEALASVLCSNSSRMKELDLSTNDLQDSGVKLLSAGLGSPHCTLKTLSL
SGCLVTQEGCASLASALSSNPSHLRELDLSNNHPGDSGAALLSAGLEDPRWRLDTLSVEH
GGV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggatatacctgttatgtttaaagatggaaatcagtctattgagaagagaagaatccag
cagcaaagagcagactcccctggacccagctgtgtctccatgaagagtgaatggtctatg
gaacaacctcttaactttaaagatgcaattcagtctattgagaagagaagagtccagcag
gagagagcagactcccctggaccaagctgtgtctccatgaagagtgaccgctctatggag
caacctctttactttaaagatggaaatcaccaactttctaatgaaagacaccaggagagg
tcaaaggttaccagtgctcagtctgtacagcagcatcaagcagagaaggagatgaaccag
gtggaactggccgacacactgtgggacggatctgctgctgtcgagtgccaacataaaatc
aagtctcgtttggagaagaagtccaggtgtgtgtttgagggaatcgctaaagcaggacag
caaacaaatctgaattacttctacacagagctcctcatcacagagagaggcagtggggag
gtcaaccaggaacatgaggtcagactgattgaaacagcttccaggaaaccagccaagaag
gaaacactaatcagatgtgaggacatctttaaacccttacctggacaagataaaccactc
cggacaatcatgacaattggagtggccggcattggtaaaaccgtcttaacacacaagttt
actctggactgggctgaaggcaaagccaaccacaacatacaattcacatttctcctcact
ttcagagagttaaatttactgaatgggaaagagtttagcttggtggaacttcttcatcac
ttctttattgagaccaaagaagcaggaatctgcagattcgaccggttccaagttgtcttt
atcttggatggtctggatgagtgtcgacttcctctggacttccagagaaacccgatctgg
agggatgtcacaaagtccacctcggtggacctgctgctgacaaacctcatcaggggcgac
ctgcttccctccgctcgcatctggataaccacacgccctgcggcagccaatcagatccct
gctgagtgtgttggtatggtgacagaggtgagagggttcaccgacccacagaaggaggag
tacttcagaaagagattcatagaggagacactggctaacacaatcatctcccacatcaag
aaatcacgaagcctccacatcatgtgtcacatcccagtcttctgttggatcactgctaca
gttctggaagacttcttcaaaacatcccagataggagaagagatgcccaagaacgtgact
gatatgtacagccacttcctgagggttcagtcaatacaggggggcaggaagtatcatggg
agagctgaaacagatccagactggagttcagagagcaggaagatcattgtttctctggga
aaactggctcttaaccagctggagaaaggccacctgatcttctacgaggcagacctggca
gagtgtgacatcgatatcaaagcagcctcagtgtactctggagtgttcacccagatcttt
aaagaggagtgcgggctgtaccaggacaaggtgttctgctttgtccatctgagcatccag
gaatttctggctgccctatatgtctttatgtcattcatcgacacgggggtcaatctgttc
tcaggacaaccacaaacccagcagtctaaactctaccagagtgctgtggacaaggcctta
atgagtgagaacggacacctggacttggtcctccgcttcctcctgggcctctctctggag
agcaatgcgattgtcctacaaggtctgctgagaaagacagtaagtagctcaaagagcagt
gaggaaactgtgtcttacattaagaagaagataggtggagatctctctacagagagaagc
ataaatctgttccactgtctgaatgagctgaacgaccgttctctagtggaggagatccaa
cagtacctgacatcaggtagactctctgaagattctctctctcctgctcattggtcagct
ctggtcttcatcctactgtcatcagaagaggtgctggacgtgtttgacctgaagaaatac
tctgcttcagagcagggtcttctgaggctgctgccagtggtcaaagcctccaaaacatct
ctgctgaatggctgtcagctgtcagagagatgctgtgaagctctggcctcagttctctgc
tccaattcttctcgtatgaaagagctggacttgagtaccaatgatctgcaggattcagga
gtgaagctgctctctgctggactggggagtccacactgtacactgaaaactctcagcttg
tctggctgcctggtcacacaggaaggctgtgcttctctggcctcagctctgagctccaac
ccctcccatctgagagagttggacctgagcaacaatcacccaggagactctggagctgcg
ctgctctctgctggactggaggatccacgctggagactggacacactcagtgtggagcac
ggaggagtgtga
DBGET
integrated database retrieval system
