KEGG   Gadus morhua (Atlantic cod): 115554748
Entry
115554748         CDS       T10832                                 
Name
(RefSeq) synaptobrevin-like isoform X1
  KO
K13504  vesicle-associated membrane protein 2
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    115554748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115554748
Membrane trafficking [BR:gmh04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    115554748
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    115554748
SSDB
Motif
Pfam: Synaptobrevin TMEM156 Orf78 ODV-E18 EVI2A Mid2 DUF6584 LRRC37AB_C DUF2207_C EssA Prominin Amnionless DUF6548 MacP_activator SP_C-Propep DUF6755
Other DBs
NCBI-GeneID: 115554748
NCBI-ProteinID: XP_030227445
LinkDB
Position
11:28568804..28570560
AA seq 120 aa
MDPDPANRVQALTVRMEEVALIVRKNVETVQERAGKLADVDERAEALKESSKQFGKTSIR
LKRSYDEENSCCNQKKRKLVLVIVVGVLVIILIIVLLATGVIPMGSSSSTPPPMPIAPEP
NT seq 363 nt   +upstreamnt  +downstreamnt
atggatcctgatccggccaacagggtgcaggccttgacggtgcgaatggaagaggttgct
ctgatcgtgaggaagaatgtggaaacggtccaagagagagctggaaaactggccgacgtc
gacgagagggctgaggcattgaaggagtcgtccaagcaattcgggaagacgagcataagg
ctgaagcgctcctatgacgaggagaacagctgctgcaaccagaagaagcgtaagctggtc
ttggtcatcgtggtgggcgtcctcgtcatcatcctcatcatcgtcctgctggccacaggg
gtcatccccatgggctcctcctcctccacgccccccccaatgcccatcgcccccgaacca
tga

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