Gadus morhua (Atlantic cod): 115554748
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Entry
115554748 CDS
T10832
Name
(RefSeq) synaptobrevin-like isoform X1
KO
K13504
vesicle-associated membrane protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115554748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115554748
Membrane trafficking [BR:
gmh04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
115554748
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115554748
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
TMEM156
Orf78
ODV-E18
EVI2A
Mid2
DUF6584
LRRC37AB_C
DUF2207_C
EssA
Prominin
Amnionless
DUF6548
MacP_activator
SP_C-Propep
DUF6755
Motif
Other DBs
NCBI-GeneID:
115554748
NCBI-ProteinID:
XP_030227445
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Position
11:28568804..28570560
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AA seq
120 aa
AA seq
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MDPDPANRVQALTVRMEEVALIVRKNVETVQERAGKLADVDERAEALKESSKQFGKTSIR
LKRSYDEENSCCNQKKRKLVLVIVVGVLVIILIIVLLATGVIPMGSSSSTPPPMPIAPEP
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgatccggccaacagggtgcaggccttgacggtgcgaatggaagaggttgct
ctgatcgtgaggaagaatgtggaaacggtccaagagagagctggaaaactggccgacgtc
gacgagagggctgaggcattgaaggagtcgtccaagcaattcgggaagacgagcataagg
ctgaagcgctcctatgacgaggagaacagctgctgcaaccagaagaagcgtaagctggtc
ttggtcatcgtggtgggcgtcctcgtcatcatcctcatcatcgtcctgctggccacaggg
gtcatccccatgggctcctcctcctccacgccccccccaatgcccatcgcccccgaacca
tga
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