Gadus morhua (Atlantic cod): 115555061
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Entry
115555061 CDS
T10832
Symbol
cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115555061 (cacna1e)
04020 Calcium signaling pathway
115555061 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115555061 (cacna1e)
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115555061 (cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115555061
NCBI-ProteinID:
XP_030227591
LinkDB
All DBs
Position
12:complement(25421264..25483295)
Genome browser
AA seq
2398 aa
AA seq
DB search
MARFGDDVPGLLGSGDGGSERNRNRDGATVSTGGISPAFKQTKAQRARTMALYNPIPVRQ
NCLTVNRSLFIFGEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPGEDKTPM
SKRLEKTEPYFIGMFCLEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILATAGAHM
NIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGMLLFFAILMFAIIGL
EFYSGKLHQTCRPQLGILENQTVDSSLSDFPCGVRQCPDKYTCTEGWIGPNDGITQFDNI
LFALLTVFQCITMEGWTTVLYNTNDALGPAWNCLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGTSALDVLKRATT
IKRRGLDVPRGGPSDEDSYGDISSVGIPMPRASIRSAKRGPTAYFRRKERLLRVSIRRMV
KTHTFYWTVLSLVALNTMCVAIVHHNQPPWLSVFLYYAEFLFLALFATEMFLKMYSLGPR
LYFHSSFNRFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLV
VSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQIL
TGEDWNEVMYNGIRSQGGVGSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEAEAAFNQKHALQKAKEVGAMSSLMSSDGSRRRRPYLYRKRAIHRSRPAHSYSLEES
QGSFREAFPPPPLNPCNSFMSRRERRRRMTMSVWEQRTSQLRRHRQMSSREVLHNSTGGE
EAKDGAAAAAAAAAATTPPPGALPHPLSVHGKHNQSTPLGSLKRLAAADPLASPNPPPPT
DPTGPSGEALALSPPDALPAVAADAASDRDDAASRPEPPLTLAVPEPPPEPEPAAERGGH
YGPVNGCRSPMRNGERRHRAAKKFRPPAAGDALTPEMAGGHGAPVRGRRRGGPAGGRGQG
GQRSASRSVSRERRSRSGGEEEEEEEEEAGGEKLGGGRPKGEHSSDPGLSEGQNQTHAPC
PQNQGGQAEQWEPPGLRPPSPPGDDSGGPDHSAALCLDQDQLGSSVTIDMPNVHSAMELS
TITVNSKDSEGCPSEKGETEDSKPVSTVPPNSMFIFKPNNPVRRACHYVVNLRYFETCIL
LVIAASSIALAAEDPVDTASGWNKALRYFDYVFTGVFTFEMIIKMINMGLILHDGSYFRD
LWNILDFIVVIGALVSFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFD
CVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDGSKDTEKDCQGYYIDYGKDK
KEVKRRDWKRHEFHYDSVVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRGNRMEMS
IFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYM
PQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYDAVLKHLNTAFTVL
FSVECILKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVMQSDDTFNMSFLKLFRAARLI
KLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEETHINQHN
NFRTFFGALMLLFRSATGESWQEIMLSCLGGQRCELPASHTPALLTSDQEGGCGTDFAYF
YFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHY
TDMYQMLTNMSPPLGLGKKCPSKLAYKRLVLMNMPVDEGMKVHFTSTLMALIRTALEVKI
ARGGEDRGQMDIDLQKEIAVIWPHVSQKNLDLLVPIHKASDMTIGKIYAAMMIMDYYKQS
KAKKLRQQLEDQKHAPMFQRMDASSLPQDILCSAKTLPFLTHSAGSALTRGGFVALSPIS
PQDMFLQRPLSHTLDKEEEEDYHHPPYRRYHHPIQQHPHHHMHTLVPEVVEYDRVMKQTA
AQDPAAVIRSPGRTASIRASSMPRLAVADPQSGAAADSKLMKRSFSTIGDQCVNGLWQEE
HSLEKISPDCAYRPRQRSYRGPRVTHKEAGAHERGRSKERRHLLSPDVSRCNSEERSQDQ
SSERRRSRSPSEGRARDLQRQAAAPGSPAHSATDGGTPRGRRQLPQTPSRPRPFISYSPL
VSRGADPSSTPPAAPSSTTTTTTTTMQPPQDPHPGGFVEGPWRAEREGGAHPAAAVAAPG
AGSPPSGPEGPGGGPPAGLHSSPHRYISEPYLPFHQGPHGGGGGGGGGAGGEAGDGEETL
TFEAAIATSLGRANAISSAPQLRHSWQVPNGHFMKHRAPASAAGAGQPVSDTDEDDRC
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atggcccggttcggggacgatgttccgggcttgcttggctccggggacggcggctccgag
cgcaaccggaatcgggatggagcgaccgtgtccacggggggcatctcgcccgcattcaag
cagaccaaagcgcagcgggcccgcaccatggccctgtacaaccccatccccgtccggcag
aactgcctcaccgtcaaccgctccctcttcatcttcggggaggacaacgtggtcaggaag
tatgcgaagaagatcaccgagtggcctccatttgaatacatgatcctggccaccatcatc
gccaactgcatcgtcttggccctggagcagcatctccccggagaggacaagactccgatg
tccaagagactggaaaagacggagccatacttcatcggcatgttctgcctcgaggccggg
attaagatcatcgccctgggctttgtgttccacaagggctcctacctgaggaatgggtgg
aacgtcatggacttcatcgtggtcctcagcgggatcctggccacagcaggggcccatatg
aacatacccgtggacttgaggaccctgagggcagtgcgcgtgctgagacccctaaagctg
gtatcaggcatccctagtctccagatcgtcctgaagtccatcatgaaggccatggttcct
ctgctccagatcggcatgctgcttttcttcgccatcctcatgttcgccatcatcggcctg
gagttctacagcggcaagctgcaccagacctgcaggccccagctggggattctggagaac
cagacggtggactcgtccctgtccgacttcccctgtggggtgcgccagtgtccggacaag
tacacctgcaccgagggctggatcggacccaacgacggcatcacccagttcgacaacatc
ctgttcgccctactcactgtgttccagtgcatcaccatggagggctggaccacggtgctc
tataataccaacgatgccttggggccggcgtggaactgcctctacttcatccccctcatc
atcatcgggtccttcttcgtgctgaacctggtgctgggagtcctctctggggagtttgcc
aaggagagggagagagtggagaaccggagggccttcatgaagctacggcgccagcagcag
atcgagagggagctcaacggctaccgcgcctggatagaccgagcagaggaggtgatgctc
gctgaggagaataagaattcaggaacttctgctctggatgtcttgaagagagccacgacc
atcaagaggaggggtctggacgtgccgcgcgggggcccctcggatgaggattcgtacggg
gacatctcgtctgtaggtatccccatgcccagagccagcatcaggagtgccaagcgcggc
cccacggcgtacttccgacggaaggagcgtctcctgcgtgtctccatccggcgcatggtg
aagacccacaccttctactggaccgtgctgagcctggtggccctcaacaccatgtgtgtg
gccatcgtccaccacaaccagcccccctggctctccgtcttcctgtactatgcagagttc
ctgttcctggcgttgttcgcgaccgagatgttcctgaagatgtacagcctgggcccacgc
ctctacttccactcctccttcaaccgcttcgactgcagcgtgatcgtggggagcatcttt
gaggtgctgtggggtttcttcaggcccggcacctcgttcggcatcagcgtgcttcgcgcc
ctgcgactgctgaggatcttcaagatcaccaagtactgggcgtctctaaggaacctggtg
gtgtctctgatgaactccatgaagtccatcatctccctcatcttcctcctcttcctcttc
atcgtggtgtttgcactgcttggcatgcagctcttcggtggcaggttcatctttgaagac
tacactccaacaaactttgacaccttccctgcagccatcatgaccgtcttccagatccta
accggagaggactggaacgaggtgatgtacaacgggatccgctcccagggaggagtgggg
tcgggcatgtggtcttccatctactttatagtcctcaccctgtttggaaactacacgctc
ctcaatgtcttcttggccatcgctgtggataacctagctaatgcacaagaactcaccaag
gacgaagaggaggctgaggccgccttcaaccagaagcatgcgctccagaaggccaaggag
gtgggagccatgtcctccctcatgtcttcagatggcagtcggaggagaaggccctacctg
tacaggaagagggccatccaccgcagccggccggcccactcctactccctggaggagagc
cagggcagcttccgggaggccttcccgccgccccctctcaacccctgtaactctttcatg
tccaggagggagcggcggcgacgcatgaccatgtccgtgtgggagcagcggaccagccag
ctgcggaggcaccggcagatgtccagccgggaggtgctgcacaacagcaccggcggcgag
gaggccaaggacggagccgccgccgccgccgccgccgccgccgccaccacgccgccaccg
ggggccctcccgcacccgctgtccgtgcacggcaaacacaaccagagcacccctctgggc
agcctcaagcgcctggccgcggcggaccccctggcctcgccgaaccccccgcccccgacg
gatcccacgggtccttcgggcgaggccctcgctctctcccccccggacgccctcccggcg
gtggctgcggacgccgcgtcggaccgcgacgacgcggcgtcgcgcccggagccccccttg
accctggcggtgccggagccgccgcccgagccggagccggcggcggagagggggggccac
tacggccccgtcaacgggtgccggagccccatgcggaacggcgagcggcggcaccgcgcc
gcgaagaagttccgcccgcccgccgccggggacgccctgaccccggagatggcggggggt
cacggcgcgccggtcaggggccggaggaggggggggccggccgggggcaggggtcagggg
ggccagcgctcggccagcaggtccgtcagccgggagcggaggtcgaggagcgggggggag
gaggaggaggaggaggaggaggaggccgggggggagaagctcggaggggggagaccaaag
ggagaacacagttctgacccaggtctgtcagagggccagaaccagacccacgccccctgc
cctcagaaccaggggggccaggcagagcagtgggagccccccggtctccggccaccctct
ccccctggtgatgacagcggaggtcccgaccacagcgccgccctgtgcctggaccaggac
cagctgggctccagtgtgaccatagacatgcccaacgtacactctgccatggagctctcc
actatcacagtgaacagtaaggattcggagggctgtccgtcagagaagggggagacggag
gacagcaagcccgtcagcaccgtcccccctaacagcatgttcatcttcaaacccaacaac
ccggtgcggcgggcctgccactatgtggtgaacctccggtactttgagacctgcatcctg
ctggtcatagctgccagtagcatagcgctggcagccgaggaccctgttgataccgcctcg
ggctggaacaaggcgctgcgatattttgattatgtgtttactggagtcttcacctttgaa
atgattatcaagatgattaacatgggtctgatcctccacgacggctcatacttcagagac
ctctggaacatcctggacttcatcgttgtgatcggagcgctggtgtctttcgccctcacc
aatgtgttggggaacaataagggccgggacattaagaccatcaagtctctgagagttctg
cgcgtcctcagaccgctgaagaccatcaagaggctccctaaactcaaggccgtgttcgac
tgcgtggtcacgtctctgaagaacgtcttcaacatcctgatcgtctacaaactcttcatg
ttcatcttcgccgtcatcgccgtgcagctcttcaaggggaagttcttctactgcaccgac
ggctccaaggacacggagaaagactgccagggctactacatcgactacgggaaggacaag
aaggaggtgaagaggcgggactggaagagacacgagttccactacgacagcgtggtctgg
gccctgctgaccctgttcaccgtgtccaccggggagggatggccgcaggttctgcagcac
tctgtggacgtgacggaggaggacagaggacccagccggggcaacaggatggagatgtcc
atcttctacgtcatctactttgtggtgttccccttcttcttcgtcaacatctttgtggcg
ctcatcatcatcaccttccaggaacagggggacaagatgatggaggagtgtagcctggag
aagaacgagcgggcctgcatagactttgccatcagcgccaagccactgaccagatacatg
ccccagaaccgccacaccttccagtaccgtctctggcacttcgtggtctcgccctccttc
gagtacaccgtgctggccatgatcgccctcaacaccatcgtgctgatgatgaagtactat
tcagccccaccggcctacgatgcagtcctgaagcacctgaacacagccttcaccgttctc
ttctccgtcgagtgcatcctcaagatcatggcctttggcttcctgaactacttcagagac
acctggaacatattcgacttcatcaccgtcttgggaagcattacggagatcgtggtcatg
cagtcggacgacacgttcaacatgagcttcctgaagctgttccgcgcggcgcggctgatc
aagctgctgcggcagggctacactatccgcatcctgctgtggaccttcgtccagtccttc
aaggccctgccctacgtctgcctgctcatcgccatgctcttcttcatctacgccatcatc
ggcatgcaggtgtttgggaacataaagctggatgaggaaacgcatatcaatcaacacaac
aactttaggaccttttttggtgctctgatgctgctcttcaggagtgctacaggggagtcg
tggcaggagatcatgctgtcctgtcttggggggcagcgctgtgagctgcccgcctctcat
actcctgcgctgctgacctccgaccaggaggggggctgtgggaccgactttgcatacttc
tatttcgtctccttcatcttcttcagctccttcctgatgctgaacctgtttgtggcggtg
atcatggataactttgagtacctgaccagagactcctccatcctgggccctcaccacctg
gacgagtttgtgcgcatctggggggagtacgaccgggctgcgtgtggtcgtatccattac
actgacatgtatcagatgttgaccaacatgtcgccacctctaggcctgggcaagaaatgc
ccctccaagttggcctataagaggctggttctcatgaacatgcccgtggacgaggggatg
aaggtccacttcacctccaccctcatggctctcatccgcaccgccctagaggtcaagata
gccagagggggtgaggatcggggtcagatggacatcgacctgcagaaggagatcgctgtg
atctggccccacgtttcccagaagaacctagacctgctggttcccatccacaaagccagc
gatatgaccatcgggaagatctacgccgccatgatgatcatggattattacaagcagagc
aaagccaagaagctccggcagcagctggaggatcagaaacacgctccgatgttccagcgt
atggacgcgtcctctctgccgcaggacatcctgtgcagtgccaagacgctgcccttccta
acgcacagcgccggatcagcccttaccaggggaggttttgtggccctcagccccatctcc
cctcaggacatgttcctgcagcgtcccttgtctcacacccttgataaggaggaggaggag
gactaccaccacccaccctacagacgctaccaccaccccatccagcagcacccccaccac
cacatgcacacactggtacccgaggtggtggagtacgacagggtgatgaaacagactgcc
gcacaggaccccgctgctgtgatcagatctccggggaggaccgcctccatccgggcctcc
tccatgcccaggctggctgtggcggacccccagtcgggagcagcagcagacagtaagctg
atgaagcgctccttctccaccatcggggaccagtgtgtgaacggcctgtggcaggaggag
cactccctggagaagatcagccctgactgtgcctaccggccgcgccagaggagctaccga
gggcccagagtgacccacaaagaggccggggcccacgagagaggccgctcaaaggaacgg
cgccacctgctgtcgcctgacgtgtcgcggtgcaactcagaggagcgcagccaggaccaa
tccagcgagaggaggcgttcccgttcgcccagtgaggggcgggcgagggacctgcagaga
caggccgccgcccccggcagcccggcgcactcggccaccgacggcgggacgccgcgcggc
cggcggcagctcccccagacgccgtcccgcccgcggcccttcatctcctactcccccctg
gtgtcccggggggccgacccgtcctccacccccccggcggcgccctcctccaccaccacc
accaccaccaccaccatgcagcccccccaggacccccaccccgggggcttcgtcgagggc
ccctggagggcggagcgggaggggggtgctcacccagctgcagcggtggcggcgccagga
gcggggtcgcctccctccggccccgagggtcccggcggcggccccccggcagggctccac
tcctcgccacaccgctacatctcggagccctacctccccttccaccagggcccccacggc
ggcggcggcggcggcggcgggggggccgggggggaggcgggcgacggcgaggagactctg
acgttcgaggccgccatagcgaccagcctgggccgcgccaacgccatcagctcggccccc
cagctcagacactcctggcaggtgcccaacggccacttcatgaagcaccgcgcgccggcc
agcgccgccggcgccggacagccggtgagcgacacggacgaggacgaccgttgctaa
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integrated database retrieval system
