Gadus morhua (Atlantic cod): 115555064
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Entry
115555064 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04530
Tight junction
Brite
Membrane trafficking [BR:
gmh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115555064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
PH_13
SOS1_NGEF_PH
Prok-RING_1
C1_2
Motif
Other DBs
NCBI-GeneID:
115555064
NCBI-ProteinID:
XP_030227594
LinkDB
All DBs
Position
12:26102421..26145079
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AA seq
1637 aa
AA seq
DB search
MAGSPLNHSWPSFSKNWMKRWSFKRGSECKPGSDPCGAVDGPLSAQPSSPSDAGTGSASS
LSPASIAEDAYFPRPNSEDQEDSCSVISDYDFPDADQGSSGEDLQGLSSSLRGSEYFKDL
QGGVPPSVSTATASPPSQPQDLQRLRQSSPVVGSAGTPEWDLTFGGPSGTPPGLQNSLVV
TQISPIPGVTPPGSAPDTRPLEAPVVGLSLTIRLDQLLTAMDPERPTTAAVSWDLVGAGG
PGGEGGPGGEGGLVGAGATEDPDPDLDAFPIFVRSMSTSRRHSWVVPVASFNQGRRLSLD
TMAMDSDGEREMDETDGPRPKIPPYAKERDTRWPDRRSELLAPECSQAAHISQLVETSKQ
AARAAQDTEELDPEENLHSAEGQSHMAKQRGVRSEAKESGSVTWYEFLNNENEEEDGPTE
KVEKGTKVKRTLSSLRNRVTGSFTKDKGKNRENKEHHKERVKEKEKVCRSRSSDSLGHDL
VPGSFSSYADCSLCSKSLHQKHGLQCTNCAVNVHKSCRTLLGECNSHKNKRENRTLPSNL
VSRGADGEAPREQPGRASLLTADGPSGRPRSPGMSFVPRGSGTQPSSYASSLRHNNSGMD
ETDAFRKRADDTVSLAPSTTESILVEDVHYVAVRAELEADAQDLEAESWSLSVDQQCVKK
YSKEMVKRQDVIYELMQTEMHHVRTLKIMLCVYVRELKENLQMEPSKLDCLFPRLESLLD
LHTNFLSRLKERRRDCLLAPGERNYFINRLADVLIGQFSGEIGEKMKESYGDFCSSHLEA
VSFYKEQLQNNKKFQNLMRKINNFPIVRRLGVTECVLLVTQRITKYPVLVERILQNTEAG
TEEHEELTRALVLIKNGIVQVDALVNLHEKTLRLRDIHGRMEPKALGKIKDGRVFRREDL
APGRRTLLHTGTVHWKAASGRLKDILAVLLSDVLLLLQEKDQRYVFAMVDNKPSVISLQK
LIVREVAHEEKAMFLICASSKEPEMYEIHTSSKEERNTWMSLIRQAMESCPHTEGRLFSE
EEEARAVRFKEFQDRLNQKDALVVHALTEKLQLFAEMAETTAGLEDTASRSRLLLRGDAS
DLQQGEALLKGAITEVENLQNLPVWGEGGGRGGGAEDEEEEEVEDEEERDGSSSPRLEAG
GSSGNLPRRAGTFGGYDRSPSILPKNCSVRRNKARSRDRSQRARSDPQLKDLSGSHTQEH
AVEDGCSPPPASWNRIWSNSFPEAEFFDRVLMLSQRLYSLQAIISQQDSHMELQRASLTE
RASLPGRHRGNILLEQEKQRTLALQREELASFHKLQAQHRLEQQRWEKERQRHRQQVEAT
EARLHQREEECARLEERLREEREELELQRKTYQQDLERLRESTRTVEREKERLEHQRKIK
RKTIEVAPLSGSLNGELLLKSGDGSATPDPPAAQKPLGRSSMSMAPADFQERPESSLRRE
ASSAGTPAAKTEXPLHLFSTTNQQHKVLGFQQQIPTKLAVLSRKDKNTKSMKASHRSDSS
ASLDTRQMLPLKLSARDDSSLKARRSVSPHQPSHGPQHHPDPVVPQTAGSLTASPSCPPC
LPPSPSISPPARLSPPRAPVTLLPRPGPGAQPPDTGAAATPGPRPRPGPGPRPRPGPGVS
PPYGFPSKEDKEDVIFF
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctcgcctctcaaccactcctggccttccttctctaagaactggatgaaaaga
tggtccttcaagagaggttcagagtgcaagccaggcagtgatccctgcggcgcggtcgac
ggtcctctgagtgctcagccttccagccccagcgatgctggaacggggtccgcctcttcc
ctgtccccggcctccatcgcagaggacgcctacttcccacgcccaaactccgaggaccag
gaggactcctgctctgtgatcagcgactacgacttccccgacgccgaccagggcagcagc
ggcgaggacctgcagggcctgagctcatctctccgaggctccgagtacttcaaggacctc
cagggtggggtgccgccttcggtgtccacggcaaccgcatcgccgccgagccaaccgcaa
gaccttcagcggctccgccagagcagtccggtcgtcggctccgcggggacccctgagtgg
gacctgaccttcgggggccccagcggaaccccgccggggttgcagaacagcctggtggtc
acccagatctcccccatcccgggggtgacgccgccgggcagcgccccggacacccgtccc
cttgaggcccccgtcgtggggctcagtttgacgatacgtttggatcaacttttgacggcg
atggatccggagagacccacgaccgcggcggtgtcttgggacctggtgggagcggggggc
ccggggggagaggggggtccggggggagaggggggtctggtgggggcaggggccacggag
gatccggaccctgacctcgacgctttccccatcttcgtgcgatcgatgtccacctcgaga
agacacagctgggtggttcctgtggccagcttcaaccaggggagaagactgagcctagac
accatggccatggacagtgatggagagagggaaatggatgaaacagacggacccaggcct
aaaatacctccctacgctaaagagagagacacgcggtggcctgacaggcgttctgagctc
ctggccccagagtgcagccaggcggcacacatctcccagctggtggagacctccaaacaa
gctgccagggcggcccaagacacagaggaactggaccctgaggagaacttgcattctgca
gaaggacagagccacatggccaaacaaagaggggtgagatcagaggccaaggaatcagga
agtgtcacttggtacgagttcctcaacaatgaaaatgaggaagaagatggaccgactgag
aaggtggaaaagggcaccaaggtgaagaggactctcagttctctgaggaacagggtgact
ggatccttcaccaaagacaagggtaagaacagagaaaacaaggagcaccacaaggagagg
gtcaaggagaaggagaaagtgtgtcgcagcagaagcagtgacagcctcgggcacgacctg
gtgccgggctccttctccagctatgccgactgctcactgtgcagcaaaagcctgcatcag
aagcatggcctccagtgcacgaattgtgccgtgaacgtccataagagctgtaggactctg
ctgggggagtgcaacagccacaagaataagcgagaaaacaggacgttaccttccaacctt
gtgtccagaggcgcggacggggaggcgccccgagagcagccgggccgagcgtcgctgctg
accgcggatggcccgtcgggcaggccccgctccccaggcatgagcttcgtcccgcgcgga
tccggcacccagccctccagctacgcctccagcctccgtcacaacaactcagggatggat
gagaccgatgccttccgcaagcgcgcggacgacacggtctccctagccccctccaccacc
gagtccatcctcgtagaagatgtccactacgtagcagtgcgggctgagctggaggccgac
gcccaggacctggaggccgagtcctggagtctgtctgtggaccagcagtgtgtcaagaag
tactccaaggagatggtgaagagacaggacgtcatctacgagctgatgcagaccgagatg
caccacgtgcgcacgctgaagatcatgctgtgcgtgtacgtgcgcgagctgaaggagaac
ctgcagatggagccgtctaagctggactgcctgttcccccgcctggagagtctcctagac
ctccacaccaacttcctgtcccgcctcaaggagcgccggagggactgcctcctggcgccc
ggcgagaggaactactttatcaacaggctggcggatgtgctcattggacagttctcgggt
gagatcggggagaagatgaaggagagctacggggacttctgcagtagccacctggaggcg
gtgagcttctacaaggagcagctgcagaacaacaagaagttccagaacctcatgcggaaa
atcaacaactttcccattgtgcggaggctgggcgtgacagagtgtgttctgctggtgacc
cagcgcatcaccaagtaccccgtcctggtcgagcgcatcctgcagaacacggaagcgggg
acggaggagcacgaggagctgacgcgggcgctggtgctcatcaagaacggcatcgtccag
gtggacgcgctggtcaacctccacgagaagacgctgcggctgcgggacatccacggccgc
atggagcccaaggcgctggggaagatcaaggacggccgcgtgttccggcgggaggacctg
gcccccgggaggaggacgctgctgcacacgggcacggtgcactggaaggccgcctccgga
cggctcaaagacatcctggccgtgcttctgtcagacgtgctgcttctgctgcaggagaag
gaccagcgatacgtgttcgccatggtggacaacaagccgtctgtgatctcgctacagaag
ctcatcgtcagggaggtggcccacgaggagaaggccatgttcctgatctgcgcctcctcc
aaggagcccgagatgtacgagatccacaccagctccaaggaggaacgcaacacctggatg
agcctgatccggcaggccatggagagctgtccacacacagaggggaggctcttcagtgag
gaagaggaggcgcgggccgtgaggttcaaagagttccaagaccgtctgaaccagaaggac
gcgctggtggtccacgcgctcaccgagaagctgcagctgtttgccgagatggcggagacc
acggcgggcctggaggacacggcctcccgctccagactgctgctccggggcgatgcctcg
gacctccagcagggggaagcgctgctcaagggagccatcaccgaggtggagaacctccag
aatcttccagtctggggtgagggaggaggtcgaggaggaggggcggaggacgaagaggag
gaggaggtggaggatgaagaggagagggacggttcctcatccccacggctggaggctggg
ggcagctctgggaatctacccaggagagcgggcacgttcgggggctacgacagaagcccc
agcatcctccccaagaactgcagtgtgaggaggaacaaggccaggagtcgagacaggagc
cagagagcccgctcagaccctcagctcaaagacctctctggcagccacacccaggagcac
gcggtcgaggacggctgctccccgccccctgccagctggaaccgcatctggtccaactcc
ttcccggaggccgagtttttcgacagagtgctgatgctttcccaacggctgtacagcctt
caggccatcatctcccagcaggacagccacatggagctgcagcgggcctcgctgacggag
cgcgcctcgctgcccgggcgccaccgggggaacatcctgctggagcaggagaagcagcgg
acgctggccctgcagcgcgaggagctggccagcttccacaagctgcaggcccagcaccgg
ctggagcagcagcgctgggagaaggagcgccagaggcaccggcagcaggtcgaggccacc
gaggcccggctccaccagagggaggaggagtgcgcccggctggaggagcgtctgcgggag
gagcgggaggagctggagctgcagaggaagacgtaccagcaggacctggagcggctgcgg
gagtccacccgcaccgtggagcgggagaaggagcggctggagcaccagaggaagatcaag
aggaagaccatcgaggtggcccctctgtcgggcagcctgaacggcgagctcctcctgaag
tccggcgacggctcggcgacccctgacccgcccgcggcccagaagcccctggggcggagc
agcatgtccatggcgccggcggacttccaggagcgacccgagtcgtccctgaggcgcgag
gccagctccgcggggacgccggcggccaagacggagnttccgctgcacctgttcagcacc
accaaccagcagcacaaggtgctggggttccagcagcagatccccaccaagctggccgtg
ctcagccgcaaggacaagaacaccaagagcatgaaggcgtcccaccgcagcgacagcagc
gcctcccttgacacaaggcagatgctgcctctgaagctgtcggcccgggacgacagttcc
ctgaaggccaggcgctccgtcagcccccatcagccgagccacgggccccagcaccaccca
gatccagtcgtcccccagacggcgggctctctgactgccagtccctcgtgccccccgtgc
ctcccgcccagcccctccatcagccctccggcccgcctcagcccgcccagagccccggtc
accctactaccacggccaggcccaggcgcccagcccccagacacaggggccgctgcaaca
ccagggccccggccacggccagggccagggccccggccacggccagggccaggcgtgtcc
cctccctacggcttccccagcaaggaggacaaggaagacgtgatcttcttctaa
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integrated database retrieval system
