Gadus morhua (Atlantic cod): 115555084
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Entry
115555084 CDS
T10832
Name
(RefSeq) excitatory amino acid transporter 1-like isoform X1
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115555084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmh02000
]
115555084
Transporters [BR:
gmh02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
115555084
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
115555084
NCBI-ProteinID:
XP_030227611
Ensembl:
ENSGMOG00000006717
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Position
12:24673539..24685169
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AA seq
590 aa
AA seq
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MSVSHETCLLDQVLGLIINEKPSTSASLFLHEDADRPPRAERGGRGGGGGGVAGGVRSRV
RRAMERRGSRLKGRMGSVTREGVRSFFRRNLFVLFTVAAVALGVLLGFALRPHNLSLRAV
KYFSFPGELLMRMLQMLVLPLIISSLVTGISSLDSKASGKMGVRAVVYYMVTTLIAVFIG
IVMVMIIRPGKGSRDSLMAAGGNIEPVQAADAFLDLIRNMFPPNLVEACFKQYKTMYKKT
VSIRNVTVALNLTDSLNVSESALSVNLSRVMHTIQETVVEMVPVSGSSNGVNALGMVVFS
VCLGLVMGSMKQQGQALRDFFDSLNEAIMRLVAVIIWYAPVGILFLIAGKIVEMKDLVQM
GGQLGMYTLTVILGLLIHGLVVLPLLYFLVTRKNPFSFIGGLLQALITALGTSSSSATLP
ITFRCLEENNRVDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQVNNMDLNFGQILTIS
ITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLG
AGIVEHLSRSELLGQDAERGTSVLEETEKPYQLICQENDSVKLHNSETPM
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtttcccacgagacctgcctgctggaccaggtgttgggtctgattataaacgag
aagccctcgaccagcgcctcgctctttctgcacgaagacgccgacaggcccccccgggcg
gagagaggaggtcgcggaggaggaggaggaggagtagcaggaggcgtgcggagccgcgtg
cgcagggccatggagaggagaggcagccggctgaaggggaggatgggctccgtcacccgg
gagggcgtgaggagcttcttcaggaggaacctctttgtgctgttcaccgtggccgccgtg
gcactgggtgtgctgctgggcttcgccctgcgtccccacaacctgtccctgagggccgtt
aagtacttctccttccccggggagctgctgatgaggatgttacagatgctggtgttgcct
ctcatcatctccagtctggtgacaggcatctcctctctggacagcaaggcgtcggggaag
atgggcgtgcgggccgtggtctactacatggtcaccaccctgatcgccgtcttcatcggc
atcgtcatggtgatgatcatcaggccggggaagggcagccgggacagcctcatggcggcc
ggcgggaacatagagccggtgcaggctgccgacgccttcctggacctcatcaggaacatg
tttccaccaaacctggtggaggcctgcttcaaacagtataaaaccatgtacaagaagacg
gtgagcattaggaatgtgactgtggcgctgaacctcactgactccctcaacgtcagcgag
tctgccctcagcgtcaaccttagcagggtcatgcacaccatccaggagacggtggtggag
atggtgccggtgtcgggctcctccaacggcgtgaacgccctgggcatggtggtgttctcc
gtctgcctgggcctggtcatgggcagcatgaagcagcagggccaggctctcagggacttc
ttcgacagcctcaacgaagccatcatgaggctggtggccgtcatcatctggtacgccccg
gtgggcatcctgttcctgatcgcggggaagatcgtggagatgaaggacctggtgcagatg
gggggccagctgggcatgtacaccctcaccgtgatcctggggctcctgatccacggcctg
gtggtgctgcccctgctttacttcctggtgacccgcaagaaccccttcagcttcatcggg
ggcctcctccaggccctcatcacggccctgggcacctcgtccagctcagccaccctgccc
atcaccttccgctgtctggaggagaacaaccgcgtggacaagcgggtgacgcgcttcgtc
ctcccagtgggggccaccatcaacatggacggcaccgccctctacgaggccgtggcggcc
atcttcatcgcccaggtcaacaacatggacctcaactttggacagatcctcaccatcagt
atcacggcaaccgctgccagcatcggagcagcaggcatcccccaggctgggctggttacc
atggtgattgtattgacttcggtggggctgcccacagacgacatcacgctcatcatcgcc
gtggactggttcctggaccgtctgaggaccaccaccaacgtgctgggcgactccctgggg
gcgggcatcgtggagcacctgtcccgctccgagctgctgggccaggacgccgagcggggc
acctcggtcctggaggagaccgagaagccctaccagctcatctgccaggagaacgactcg
gtgaagctccacaacagcgagacccccatgtga
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