Gadus morhua (Atlantic cod): 115555136
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Entry
115555136 CDS
T10832
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115555136
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115555136
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GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
LRR_6
WHD_NOD2
SPRY
Motif
Other DBs
NCBI-GeneID:
115555136
NCBI-ProteinID:
XP_030227688
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Position
12:complement(11040774..11069217)
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AA seq
1123 aa
AA seq
DB search
MKSDRSMDKPAHFKGGNQSIKKREILQEKADSPGASCVSMKSDRSMDGPRTYGFKDGCPS
REEIQNQERSKVTSAHSVQQNQTELIKRAEENAHAFLDKELKKLWRDLFPDYPQCSESQR
EEEVNGKNEEQRRRAIEGVVDITKLCLMELNQEELADTLLGGSTAVQCPRNIKSHLKEKF
RFMFEGIAKAGQPTPLNDFYTELFITERGSGEVNKEHEIRLIETASRKIANEETPIRCED
IFKPLPDQYQPIRTIMTTGVAGIGKTVLTHKFTLDWAEGKTNQDIHFTFLLTFRELNLMK
GEEFSLVELLHYFFIEIKEAGICRFDRFQVVFILDGLDECRLPLDFQNNLIWTDVTKPTS
VDVLLTNLIRGNLLPSARIWITTRPAAANQLPAECVDRVTEVRGFTDKQKEGYFRKRFRE
EKLASTIFSHIKTSRSLHIMCHIPVFCWITATVLEDFFKTSKRREEMPKTVTQMYSHFLH
VQSIQGDRKYHGRAETDPHWSSENRKIIVSLGKLAFNQLEKGNLIFYESDLAECDIDIRA
ASQTGVFTQIFKEECGLYQSKVFCFVHLSIQEFLAALYVFQSFIDTGVNLLSEEQPTCME
DLYQSSVDKALQSENGHLDLFLRFLLGLSLETNQIPLRGLLGQTGSSSQTNQNTVSYIKK
KINGDLSLERSINLIHCLNELNDRSLVEEIQQLLTSGSLSRESLSPAQWSALVFILLSSE
EELEVFDLKKYSASEEGLLRLLPVVKASKTSLLNCCHLSERCCEALASVLSSNSSSLREL
DLSTNDLQDSGVKLLSAGLGSPHCRLETLRLNGCHLSGRCCEALASVLSSNSSSLRELDL
STNDLQDSGVKLLSAGLGSPHCTLEALSLSGCLVTQEGCASLASALSSNPSHLRELDLSY
NHPGDSGAALLSAGLEDPRWRLDTLSVEHGGVWRLKPALKKYACELRLDPNTAQRRLSLS
EDNGRVTLVTENQLYPDHSERFDFWPQVLCREGLTGRCYWEVERKGRVDIGVTYRGITRR
GGGEDSRLGENNKSWRLCCNDDGCYAYYNARRSDIRLRRAKRVGVYLDRPAGTLSFYRVS
PDVEGSSDTLTHLHTFQSTFTQEDLLPGLRLLSYGASVSLCRL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaccggtctatggacaaacctgctcatttcaaaggtggaaatcagtctatt
aagaagagagaaatcctgcaggagaaggcagactcccctggagccagctgtgtctcgatg
aagagtgaccggtctatggatggacctcgtacatatggatttaaagatggatgcccctcc
agagaagagatacaaaaccaggagaggtctaaggttaccagtgctcattcagtacagcag
aatcagacagagctgatcaagagggctgaggagaacgcacacgcttttctagacaaggag
ctgaagaagctctggagggatctcttcccagattacccacaatgctcagagagtcaaagg
gaggaggaggtgaatggtaagaacgaggagcagaggaggcgcgccatagagggagtggtg
gacatcacaaagctctgcctgatggagttgaaccaggaggaactggctgacacactgttg
ggcggctctactgctgttcagtgcccacgtaatatcaagtctcatctgaaggagaagttc
aggtttatgtttgagggaatcgctaaagcaggacagccgacacctctgaatgacttctac
acagaactcttcatcacagagagaggcagtggagaggtcaacaaggaacatgagatcaga
ctgattgaaacagcttcaaggaaaatagccaacgaggaaacaccaatcagatgtgaagac
atttttaaacccttacctgaccaatatcaaccaatcagaacaataatgacaactggagtg
gccggcattggaaaaaccgtcttaacacacaagttcactctggactgggctgaaggcaaa
accaaccaagacatacatttcacatttctcctcactttcagagagctgaatttaatgaaa
ggggaagagtttagcttggtggaacttcttcattacttctttattgagatcaaagaagca
gggatctgcagattcgaccgcttccaagttgtcttcatcttggatggtctggatgagtgt
cgactacctctggacttccagaacaacctgatctggactgatgtcacaaagccgacctcg
gtggacgtgctgctgacaaacctcatcaggggcaacctgcttccctccgctcgcatctgg
ataaccacacgccctgcagcagccaatcagctccctgctgagtgtgttgacagggtgaca
gaggtgagagggttcactgacaaacaaaaggaggggtacttcaggaagagattcagagag
gagaagctggcaagcacaatcttctcccacatcaagacatcacgaagcctccatatcatg
tgtcacatcccagtcttctgttggatcacagctacggttctggaggacttcttcaaaaca
tccaagagaagagaggagatgcccaagaccgtgactcagatgtacagtcacttcctgcat
gttcagtccatacagggggacaggaagtaccatgggagggctgaaacagatccacactgg
agttcagagaacaggaagatcattgtttctctgggaaaattggcttttaaccagctggag
aaaggcaacctgatcttctacgagtcagacctggcagagtgtgacattgatatcagggca
gcctctcaaacaggagtgttcacccagatctttaaagaggagtgtgggctgtaccaaagc
aaggtgttctgctttgtccatctgagcatccaggagtttctggctgccctttatgtcttt
cagtccttcatcgatactggtgtcaatctgctctcagaagaacaaccaacctgcatggaa
gatctctaccagagttccgtggacaaggccttacagagtgagaatggacacctggacttg
ttcctccgcttcctcctgggcctctcgctggagaccaatcagattcccctacgaggtctg
ctgggacagacaggaagtagctcacagaccaatcagaatactgtgtcttacatcaagaag
aagataaatggagatctttctctggagagaagtatcaatctgatccactgtctgaatgag
ctcaacgaccgttctctagtggaggagatccaacagctcctgacatcaggaagtctctct
agagaatccctctctcctgctcagtggtcagctctggtcttcatcttgctgtcatcagaa
gaggagctggaggtgtttgacctgaagaaatactctgcttcagaggagggtcttctgagg
ctgctgccagtggttaaagcctccaaaacatctctgctgaattgctgtcatctgtcagag
agatgctgtgaagctcttgcctcagttctcagctccaactcctctagtctgagagagctg
gacctgagtaccaatgatctgcaggattctggagtgaagctgctctctgctggactgggg
agtccacactgtagattggaaactctcaggctgaatggctgtcatttgtcagggagatgc
tgtgaagctctggcctcagttctcagctccaactcctctagtctgagagagctggacctt
agtaccaatgatctgcaggattcaggagtgaagctgctctctgctggactggggagtcca
cactgtacactggaagctctcagcttgtccggctgcctggtcacacaggaaggctgtgct
tctctggcctcagctctgagctccaacccctcccatctgagagagctggacctgagctac
aatcacccaggagactcaggagctgcgctgctctctgctggactggaggatccacgctgg
agactggacactctcagtgtggagcacggtggagtgtggaggctgaaaccagctctaaag
aagtatgcctgtgaactcagactggacccaaacacagcccaaagacgactctctctgtct
gaggacaacggaagggtgacgctggttacagagaaccagttgtatccggatcactcagag
agatttgacttctggccccaggtgttgtgtagagagggtctgaccggccgctgttactgg
gaggtagagaggaaaggacgtgttgatataggagtgacatacagaggaatcacaaggaga
ggagggggtgaagacagcaggcttggagagaacaacaagtcctggagactttgttgtaat
gacgatggttgctatgcctactacaacgctagaagatcagacatacgtctccgccgcgct
aaaagagtaggagtgtatctggaccggcctgctggcactctgtccttctacagagtgtcc
ccagatgtagaagggtcctcagacacactgacacacctccacaccttccagtccaccttc
acccaggaggacctcctccctgggttgaggttattgagttatggtgcctcagtgtctctg
tgtcggttatag
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integrated database retrieval system
