Gadus morhua (Atlantic cod): 115555280
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Entry
115555280 CDS
T10832
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115555280
Coactivators
SAGA/TFTC/STAGA complex
115555280
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
115555280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115555280
NCBI-ProteinID:
XP_030227928
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Position
12:22903547..22918228
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AA seq
772 aa
AA seq
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MRGSHSVQPAGLINHTWWRIDGWAPQSPKTANGPIQVERLPYRLTTTMSTETSEEAKVQD
DQTQRVVAASAAAAAFDAVRIQICTTGQTSVHQPPVITTARPTPVRHSIVGSTGQRLASV
VPQASSSSVLVVAKVPTPGLCATGQPLHLTRPSSATAVSIKTPAPGRIVVMAVPKATVPQ
PLAPRPPQTSSTQLPANFQIPPGMVLIRSDSGQLMLVSQQTLAQAQGQQAQKAISVPAPR
LPASRLPSPMVTTAPAKKPDKLMVIRVSAPPTAGTSTSAAVAGMMKTTVLNREAPKPVVV
QTLNTVIGQGAQPRSQAGIKQAPSSNQPMFTITQETLENVKKCKNFLVTLIKLASSGSQS
PDMATNVKALVRSLLDGSLEPEEFTNKLYVQLKSTPQPYLVPFLKKSLPAVRHLTADPQH
FIQQAGQPKPQLATPSKPPLAPPSAAPKPSGTLTGIRPTLKHVVLNKYPTGGVPAGPTAT
GPSTLLRTGSSEGSRTTQRGVVVLSGQHQGAFSFKRPSVPQQQPTSKYAFKETSYKEDDD
INDVASMAGVNLKEESVRILAGGGIVIGSVVRSCQDTPFLYTGALQARILRTGESLGVSE
ARPEVVTLVSNATQEFLRDLLEKLSLVAEHRKNSVKEDQRHTQVTDVRAQLHFLEQVEVL
KRRRQEEELRETLLRLARRRSNCEDPEQQQLRQRAKEMQQAEQALLQHREANLTALAAIG
PRKRRPLDSTGSVVSVLAKSVVTRVTMRDLLLVMEEDRRMRHSLTLYKALMR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtagccacagcgttcagcctgccggcttaattaaccacacctggtggcgcatt
gatggctgggctccccagtccccaaagacagccaacggcccgattcaagttgaacgtcta
ccatatagattaacaacaacaatgtcgaccgagacttcagaggaagctaaagttcaggat
gaccaaacccaaagagttgtggctgcatcggcggcggcagcagcatttgacgccgtccgt
atccagatctgcaccaccggacaaacgagcgtccaccaacctcccgtaattacgactgca
cgacccacacctgttcgccacagcattgtcggcagcacaggtcaaaggttggctagtgtt
gtcccacaggcatcctcctcgtcagtactggtggtagctaaagtgccaaccccagggtta
tgtgcaactgggcagcctttgcatttgaccagaccatcctctgcaactgctgtaagtatt
aagactcctgcccctggaaggatagtggtgatggctgttccaaaggccacagttccccaa
cctctagctccccgtccaccacagacatcctccacgcagcttccagcaaattttcagatc
ccaccaggcatggtgctgatccgtagcgacagcggtcagctcatgttggtatcacagcag
acactggcccaggctcagggccagcaggcgcagaaggccatcagtgtcccagcaccaaga
ttaccagcctccagattaccatcaccaatggtcacgacagcaccagctaaaaagcctgat
aagcttatggtgatcagagtttcagctccaccgaccgccggaacctcaacatcagcagcc
gtagccggcatgatgaagacaactgtgctgaacagggaagctcccaaaccggtggtagtc
cagacactcaacactgtgatcggtcagggtgctcagcctcgcagccaggcagggatcaaa
caagcccccagcagcaaccagccaatgttcaccattacacaggagactctggagaatgtg
aaaaagtgcaagaacttcctggtgactctgatcaagcttgcgtccagcggcagccagtcc
cctgacatggccaccaacgtcaaggcccttgtgcgctccctgctcgatggaagccttgaa
cccgaggagttcacaaataagctgtatgtgcagctgaagtctactccccagccatacctg
gtgcctttcctcaagaaaagtctcccggcagtccgtcacctgaccgcagacccccagcac
ttcatccagcaggcgggccagcccaagccacagctagccaccccctccaagccccctctg
gctcctccctcagccgctccaaagccatctggtaccctcacaggaatcaggcccaccctg
aaacatgtggtcctgaacaaatatcccaccggaggagttccagctggacctacagccacc
ggccccagcaccttgctgagaacgggttcatctgagggcagtaggaccacacaaagaggc
gtggttgttctgtcaggacaacatcaaggcgctttttcttttaaaaggccttcagttcca
caacaacaacccacctctaaatatgctttcaaggaaacttcttacaaggaggacgacgac
atcaatgacgtggcctccatggccggggtcaacctgaaggaggagagcgtgaggatcctc
gccggaggcggcatcgtgattggctccgtggtgcgctcctgccaggacacgcccttcctg
tacaccggggcactgcaagcccgcatcctccgcacaggagaatccctgggggtgagcgag
gccaggccggaggtggtcactctggtgtccaacgccactcaggagttcctgcgggacctg
cttgagaagctttccttggtggcagagcaccgcaagaattcagttaaggaggatcaacgc
catacacaggtgacggacgtccgtgctcagctccacttcctggaacaagtggaggtttta
aagaggcgacgacaggaagaggagctgagggagactctgctgcgtctggctcggcggcgc
tccaactgtgaggatccagagcagcagcaactgcgacagagggccaaagagatgcagcag
gccgagcaggctctgctgcagcacagagaggctaacctcacagccctggctgccatcggg
ccccgcaagaggaggcccctggactctacaggaagtgtggtgtccgtattggccaagagt
gtggtgacgagggtgaccatgagggacttgctgttggtcatggaggaagatcggcgaatg
cgacactccctgaccctgtacaaggctcttatgagataa
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