Gadus morhua (Atlantic cod): 115555379
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Entry
115555379 CDS
T10832
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115555379 (mindy4)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115555379 (mindy4)
Ubiquitin system [BR:
gmh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
115555379 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
115555379
NCBI-ProteinID:
XP_030228065
Ensembl:
ENSGMOG00000014016
LinkDB
All DBs
Position
12:11793971..11803204
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AA seq
739 aa
AA seq
DB search
MVVSVEEVASSLVREFLSRKGLKRTIACMDEESPRTAASISNRSDLRRVLQVEGLYSHNK
ALNSPLKTLLEMIVKSHIEGPTDDLVSLQGDPLHTSRSRANLNTLTHGDGSNPQYHTEEV
PKTHLNQRSMRRDNGSLRDTPVSGSPSPRQSSPPDEDSDPAKQQPSGAYLRDNVSFPRRE
TAANESALKNRANRSRRGVLGGPIANTPQDPHKRRPSKRAGLPPSAGGRESGPSEHPGLS
KGSARRTPLGGSSPDPGETSAAELLRDRQQRQGLAEGRGSPGTHDGVQGRRPKPSTDLTM
DISQSSEMVLDDFDYDEDFQEVSRVSLSQMDLSQVSLRPGSLPQHSHKSSRMDVQTATAL
KEVLLGSGSRCFSPEWRNQGFGFSESPDLRYGIVQRKGGPCGVLASVQACLLQKLLFDDP
NPASEELGRLRPSDAVRRRCLVLAVSEMLWRAGEHKTATLAITSGRSHFVPSGHYKSEGL
LEKVTCFTADNLNALQWLLEEHIQQVSPPPPPPPPHLHSHPSPPSPLSALTNNRCSLISQ
FESGSFGCLLFCVSAVLSRSIAKVRVDMDVSSNTLIGAHGYCTQELVNLLLCGQAASNVF
DGQVQLDSTLLKGVTQRCHIGLLSLFEHHNICQVGSHLKTPLFPIWVVCSESHFSTLFGL
QRELATNQDGRSRGPREFDLYYYDGLANQQQEIRLSVSVGLRAAFQEDNDPELTPPLEQC
IRTKWKDAIVRWNDTEPIL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgtcggtggaagaagtagcctcgtcccttgtgcgagaatttctaagtcgcaag
ggtctgaagaggaccatcgcctgcatggatgaggagtctccccgcacggcggccagcatc
agcaacaggtccgacctgagacgggtcctccaggttgagggtctctacagtcacaacaag
gctctgaatagcccccttaaaaccttgctggagatgatagtgaagtctcacatcgaggga
cccacggacgacctcgtctccctccagggcgatcctctccacacatcccgaagcagagcc
aacctgaacacgctcactcatggggacggaagcaacccacagtaccacacagaagaggtt
cccaaaacacacctaaaccaacgatcaatgagacgggacaacggttctctacgagacacg
ccggtgtctggaagcccctccccgcgtcaaagttcccccccagacgaggactcggatccc
gctaaacagcagccgtccggggcctacctccgggacaacgtctcttttccccggagggag
acggcagccaatgagagcgcgttaaagaacagagccaatcgcagccgacgcggcgttctg
ggaggaccgatagcgaacacgccacaggacccacacaagaggagaccctccaaaagggcg
gggctgcccccgtcggcggggggacgggagtccgggccctcggagcaccccggcctctct
aaggggtcggctcgacggacccccctgggggggtcctcacctgacccaggggagaccagt
gctgcagagctcctcagagaccgacagcagagacagggcctcgcggagggccgggggagc
cctggtacacacgacggcgtgcagggcagaagacccaagccgtccaccgatctgactatg
gatatctcacaatcctctgagatggtcttggatgactttgactacgatgaggacttccag
gaggtgtcccgggtgtctctgtcccagatggacctgtcccaggtgtccctacggcctggt
agcctccctcagcacagccacaagagcagccgcatggacgtccagaccgccacggcgctg
aaagaggttcttcttggctcgggctcgcgctgcttcagccccgagtggaggaaccagggc
ttcggcttctccgaatcccctgacctcagatacgggatagttcagagaaagggcgggcct
tgtggggtgctggcctccgtccaggcctgccttctgcagaagctgctgtttgacgatccg
aacccggccagtgaagagctgggccggctgaggccctccgatgccgtgcgacgccgctgc
ctggtgttagccgtctccgagatgctgtggagggccggggaacacaagaccgccacgctg
gccataacctcaggaagaagtcactttgttccatcgggccactacaaatccgaaggatta
cttgaaaaggtgacctgtttcaccgctgataacctcaacgccctgcagtggctgctggag
gagcacatccagcaggtctctccccccccccccccccccccgccccacctccactctcac
ccatcgccgccgtctcctctctcagccctgaccaataacagatgctcccttatctctcag
ttcgagtccggttccttcgggtgtctcctgttctgtgtctccgccgtgctctcccgatcg
atcgcaaaggtacgggtagatatggacgtgtccagcaacacgctgataggagcccacggg
tactgcacacaggagctggtgaacctgttgctgtgcggccaggccgcgtccaacgtgttc
gacggccaggtgcagctggactccaccctgctgaagggggtcacccagcggtgccacatc
ggcctgctgtccctgttcgagcaccacaacatctgtcaggtgggtagccacctgaagacc
cccctgttccccatctgggtggtgtgcagcgagagccacttcagcaccctgttcggcctg
cagagggagctagcgaccaatcaggacggccgcagccgcggccccagggagtttgacctc
tattattacgacgggctggccaatcagcagcaggagatccgcctctccgtgtcggtgggc
ttgagagcggcattccaggaggataacgacccggagctcactcctccgctggagcagtgc
atccgaaccaaatggaaggatgccattgtgcgttggaacgacacggaacctattctctag
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