Gadus morhua (Atlantic cod): 115555541
Help
Entry
115555541 CDS
T10832
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115555541 (sin3b)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115555541 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
At4g15545_C
mTOR_dom
MCP_V20_C
Motif
Other DBs
NCBI-GeneID:
115555541
NCBI-ProteinID:
XP_030228311
Ensembl:
ENSGMOG00000013649
LinkDB
All DBs
Position
12:complement(25705016..25724284)
Genome browser
AA seq
1321 aa
AA seq
DB search
MAKIQAHSNTKQINQIQDKPYVVTQKQVQQQHFQKLKVEDALSYLDQVKIRFGNDPGIYN
KFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMVFLQSP
FSTQATQHGKAISSPTSATPSGSTSAAHTEAGSTQGTDATVAPSDTLTSSTAAAATNTTT
SSSSSTAAAAATTPDTPSRLSLPLAGRDGQSQASATSASPPASEASPVEFDSAISYVNKI
KNRFLDHPEIYRSFLEILHTYQVLTATKEQLEVKEGRGNRVTSGMTEDEVFSKVASLFKG
QEDLLAEFGQFLPDAKRSLFTGSSLTGGKEPLKRPDEDDMMSKQSKKRPRPMLLTHMTPL
LKKKMKYSCTKDQSFASVGKHGVLREFTFFDKVRRLFKSQEVYENFLRCIALFNQEVVSG
AELLQLVTPFLGKFPELYSQFKSFLGDKELAHGPSGLSDRYMEGGGGREVDYASCKRLGS
SYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDER
FELDVVLETNLATIRVLESVQKKLTRLSPEDQDRFRLDDCLGGTSEVIQRRAVYRIYGDK
APEIIEGLKRSPITAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNF
KQNDMKALRSKSLLNEIESVYDERQEQSTEEGGVGQQGRNGSGAALASEPHMVFTYEDKQ
ILEDAAALIIYHVKRQPAIHKDEKEHIKRIIQHFVPDLFFARRGELSDTEDWTDEEADAE
EAAAAGERGAGDRGGAGLGHLGAAVAPAAAAAGGGALAPGGQTLAAQPQQLNGESRRRRC
SPSQPTDGEPSPSLTPTASGAAPTAGGVPCAASTSPTPTSTTATPTTTTTDPSDPSPMET
AAAPPPPPPPAEKVDLRDPEAEHQKELDGVYNLFFVNNNWYFFLRLHQTLCSRLLRVYQQ
AERQLLAHRAEQSRERLLLAEGRRDKACDLAMELRLKQPSEVELEEYYPAFLDMVRSLLD
GNLESSQYEDTLREMFTIHAYIGFTIDKLIHNIIRQLQHLVSDEVCLQVADLYLAERKRG
AAGGNLSSQCVRSAWETSFQWKAERVMAEENCFKVMFVQDKGHVSMSVELLDTEEAQADD
PLDVQCLSSYMEQFVGAESSLCSQADGYFFKPVFLPRNLRHFRRWQVRQVEAMRCRREWH
RQLGVENAGSLDCRFKLNTHKMVFVMNSEDYMYRRGALVKARMSQHKVAVTQHERFDKWH
QGWLANHVSPSAERSVQRWLMGEDEEDMIPCKTLLVATELKGQAVNRYQVHYSGSKPPAS
P
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatacaggcacatagcaacacgaagcaaataaaccaaattcaagacaagcct
tacgttgtgacacaaaagcaagtgcaacaacaacacttccaaaaactgaaggttgaagat
gccttgtcatatttggaccaagtcaaaatacgatttggaaatgaccctggaatatacaac
aagtttctcgacatcatgaaggagttcaaatcacagagcatcgatacaccgggggtgata
aatcgtgtgtcacagctcttccatgggcacccagacctggtcttgggcttcaatgccttc
ctaccacctgggtatcggatagagatccccaagaacggcatggttttcctgcagtctccc
ttctcgacccaggctacccagcatggaaaggccatctccagtcccacgtccgccacccca
tctggcagtacctcggcagcccacaccgaggcaggctctacccagggcacggacgccacg
gtggccccatcggacaccttgacctcctcgaccgccgccgccgctaccaacaccaccacc
tcctcctcctcctccaccgccgccgccgcagccaccactccagacacccccagccgactc
tccctcccgctggctggcagagacggccagagccaagcgtccgccacctcggcgtcgccc
cctgcctcagaagctagccccgtcgagtttgacagcgccattagctacgtcaacaagatc
aagaaccgcttcctggaccacccggagatctaccggtccttcctggagatcctgcataca
taccaggtattgacagctacgaaggagcagctggaggtgaaggaggggcggggtaaccgg
gtcaccagcgggatgacggaggatgaagtgttctccaaggtggccagcctcttcaagggc
caggaggatctgctggccgagttcggacagttcttaccggacgccaagagatctctgttt
acaggaagctccctaaccggggggaaggagcctctgaagaggccagatgaagacgacatg
atgagcaaacagagcaaaaagaggccgaggcccatgctgctgacgcacatgaccccgctg
ctcaagaaaaagatgaagtattcatgtaccaaagatcagtcctttgcctcggttggaaaa
catggagtcttgcgcgagttcactttctttgataaggttcgccgcctgttcaagagccag
gaagtgtacgagaacttcctgcgctgcatcgccttgttcaaccaggaagtggtctcggga
gccgagctgctgcaactggtcactccgttcttggggaagtttccggaactctacagccag
ttcaagtccttcctcggggacaaagagctcgctcacggcccatcaggcctgtccgatcgc
tacatggaagggggggggggccgcgaggtggactacgcctcctgcaaacgcctgggctcc
agctaccgggcgctgcccaagacctaccagcagcccaaatgtagtgggcgcactgccatc
tgcaaggaggtgctgaacgacacctgggtatcgttcccctcctggtctgaggactccacc
ttcgtcagctccaagaagacgccctatgaggagcaattgcaccgctgcgaagacgagagg
tttgagctggacgtggtcctcgaaaccaacctggccaccatccgggtgttggagagtgtc
cagaagaagctgacgcgcctgtctcccgaggaccaggaccgcttccggctggacgactgc
ctggggggcacgtcggaggtgatccagcgccgggccgtgtaccgcatctacggggacaag
gccccggagatcatcgaggggctgaagaggagccccatcaccgccgtgcctgtggtcctg
aaaaggttgaaagccaaggaggaggagtggagagaggctcagcaaggcttcaacaagatc
tggagggagcagtacgagaaggcctacctcaagtccctggaccaccagggggtcaacttc
aagcagaacgacatgaaggcccttcgctcaaagagccttctgaacgagatcgagagtgtt
tatgacgagcgtcaggagcagagcacggaggaggggggcgtcggccagcagggccgcaac
ggctcgggcgccgccctggccagcgagccgcacatggtgttcacctacgaggacaagcag
atcctggaggacgcggcggcgctcatcatctaccacgtcaagcggcagcccgccatccac
aaggacgagaaggagcacatcaagcgcatcatccagcactttgtccccgacctgttcttc
gcccgccgcggcgagctcagcgacaccgaggactggacggacgaggaggccgacgcggag
gaagcagcggcggccggcgagcgaggcgccggggatagaggaggcgcgggcctcgggcac
ctcggtgccgcggtcgcccctgcggcggcggcagcgggcggaggggccctggcccccggt
ggccagaccctggcggcccagccccagcagctcaacggggagtcccggcggagacgctgc
agcccctcccagcccaccgacggcgagccctcccccagcctcacccccaccgccagcggc
gcggcacccactgcgggaggcgtcccgtgcgccgcctccacctcccccacccccacctcg
actacagccacccccaccaccaccaccacggaccccagcgacccctcccccatggagacc
gccgcggcaccaccgccgccgccgccgccggcggagaaggtggacctgcgggaccccgag
gcggagcaccagaaggagctggacggcgtgtacaacctgttcttcgtcaacaacaactgg
tacttcttcctgcggctgcaccagacgctgtgctcgcggctgctgcgcgtgtaccagcag
gcggagcggcagctgctggcgcaccgcgccgagcagagtcgcgagaggctgctgctggcc
gagggccggcgggacaaggcctgcgacctggccatggagctgcgcctcaaacagcccagt
gaggtggagctggaggagtactacccggccttcctggatatggtgcgcagcttgctggac
ggcaacctggagtccagccagtacgaggacacgctgagggagatgtttaccatccacgcc
tacattggcttcaccatcgacaagctcatccacaacatcatccgtcagctgcagcacctg
gtgagcgacgaggtgtgtctgcaggtggcagacctgtacctggcagagaggaagaggggg
gctgcgggggggaacctgtcctcccagtgtgtccggtcggcctgggagaccagcttccag
tggaaggccgagagagtcatggccgaggagaactgttttaaggtgatgttcgtccaggac
aagggccacgtctccatgagtgtggagctcctggacactgaggaggcccaggcggacgac
ccgctagacgtacagtgcctctccagctacatggagcagtttgtgggagccgagtccagc
ctgtgttctcaggccgacggctacttcttcaagcctgtcttcctgccgaggaatctgcgg
cacttccggcgctggcaggtgcggcaggtggaggccatgcgctgccggagggagtggcac
cggcagctgggcgtggagaacgccggcagcctggactgccgcttcaagctcaacacccac
aagatggtgttcgtcatgaactcggaggactacatgtaccgccggggggccctcgtcaag
gccaggatgtcgcagcacaaagtggcggtcacccagcacgagcgcttcgacaagtggcac
cagggctggttggccaatcacgtgagcccgtcggcggagcgctcggtccagcgctggctg
atgggggaggacgaggaggacatgatcccctgcaagaccctgctggtggccacggagctg
aagggccaggcggtcaacaggtaccaggtgcactacagcgggagcaaacccccagcctcg
ccctga
DBGET
integrated database retrieval system
