Gadus morhua (Atlantic cod): 115555571
Help
Entry
115555571 CDS
T10832
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03018
RNA degradation
gmh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115555571 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
115555571 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115555571 (lsm7)
03041 Spliceosome [BR:
gmh03041
]
115555571 (lsm7)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115555571 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
115555571 (lsm7)
Spliceosome [BR:
gmh03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115555571 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115555571
NCBI-ProteinID:
XP_030228370
Ensembl:
ENSGMOG00000024901
UniProt:
A0A8C5FSC4
LinkDB
All DBs
Position
12:complement(26186037..26187306)
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMESIPNPFVQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaagaagaaggaaagcatctttgatctgtcaaagtacatcgac
aaaccaattcgtgtaaagtttcaaggaggtcgagaagcgagcggtgttctaaagggattc
gatcccctattaaacctggtgttggatggcacgatcgaatatatgcgtgaccccgacgac
cagttgaagctgacggaagatacgcggcagttgggactggtggtgtgcagggggacctca
gtggtgctcatctgtccccaggacggcatggagtctattcctaaccccttcgtccaacag
caggacggataa
DBGET
integrated database retrieval system
