Gadus morhua (Atlantic cod): 115555583
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Entry
115555583 CDS
T10832
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03320
PPAR signaling pathway
gmh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115555583
03320 PPAR signaling pathway
115555583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115555583
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmh03310
]
115555583
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115555583
Nuclear receptors [BR:
gmh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115555583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
115555583
NCBI-ProteinID:
XP_030228384
Ensembl:
ENSGMOG00000018023
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All DBs
Position
12:23738743..23765506
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AA seq
466 aa
AA seq
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MWHPVAPPAALGSTGREAGYCHYSSGPMNTPHSHHHPMGSMVGHPSVISSSRPMHGASMS
GLGSPMNGLTSAYSVITSSLGSPSASLPSTPTMNFGTLSSPQMNSMNSVSSSEDIKPPPG
LQNLGNINYQCPSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRD
SKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGESEVEPTSSFNEEMPVD
KILDAELAVEPKTEMYTDSSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDD
QVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSK
MKDMQMDKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFA
KLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccgtggcccccccggccgccctggggagcactgggagagaggcgggttac
tgccactactcctcggggcccatgaacaccccccactcacaccaccatcccatgggcagc
atggtgggtcacccctccgtcatcagcagctccaggcccatgcatggggcctcaatgtcc
gggctgggctcgcccatgaacggcctgacctccgcctactcggtcatcacctcgtcgcta
gggtcgccctccgcctcgttgccctccacgcccacgatgaactttgggacgctcagcagc
ccgcagatgaactctatgaacagtgttagcagctcagaggacatcaagcctcccccgggc
ctccagaacctggggaacatcaactaccagtgccccagccccggggggatgtccaagcac
atctgcgccatctgtggggatcgctcctccggaaagcactacggcgtgtacagctgtgag
ggctgcaaaggcttcttcaagagaaccatccggaaggacctgacgtacacttgtcgagac
agcaaagagtgcctgatcgacaagcggcagcgcaaccgctgtcagtattgccgctaccag
aagtgcttggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgagggaag
gagcggggggagagcgaggtggagcccacaagtagttttaacgaggagatgcccgtggac
aagatcctggacgcagagctcgccgtggagcccaaaacagagatgtacacggacagcagc
ccgggcaactcgaccaacgacccggtcaccaacatctgccaggcagcagacaagcagctg
ttcacgctggtggagtgggcaaagaggatcccccacttctctgagctgcccctagacgac
caggtcattctactacgagcaggctggaacgagctgctcatcgcgtccttctcacaccgc
tcggtcacggttaaagacggcatcctattggccactggccttcacgtgcacagaagcagc
gcgcacagcgctggagttggctctatatttgacagagtcctgacggagctggtatctaaa
atgaaggacatgcagatggacaagacagagctgggctgcttgcgagccattgttctcttc
aaccctgatgccaaggggctgtcgaaccccccggaggtggaaggtctgagggagaaggtg
tacgcgtcgctagagtcgtacacaaagcagaagtaccccgaccagcccggcaggtttgct
aagctgcttcttcggttgcccgcacttcgctccatcgggctcaagtgtctagaacacctg
ttcttcttcaagctgatcggggacacgcccatcgataccttcctcatggagatgctggag
gctccccaccagatcacatga
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