Gadus morhua (Atlantic cod): 115555584
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Entry
115555584 CDS
T10832
Symbol
ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115555584 (ccdc50)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Other autophagy associated proteins
Others
115555584 (ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
115555584
NCBI-ProteinID:
XP_030228386
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Position
12:complement(6583735..6601021)
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AA seq
635 aa
AA seq
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MAEFSIDQKKLPPVKDVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLAQHDLKVAK
LLQEEEDMRAKAQSKRQFRDLERQDNEIAQGIQEELVRQAEQQILQEEKDMAIARKMQEK
EMKEERKRQKKLEANFEEEYFEDEGGRPDKKGHPAPRSHSGSPGRFDEPPASGRPREERF
REDPASPYSRSQNPKHYLAAEGDAHPEHSLPPRGRHGDRPPGDHPGPEAGRARGPRGEEA
ERVVRRKERPPRPPPIDLDRDWDRDRERDHERQRNRERERVRDRDRERDPRRGPERPRAR
GPAGDHHREPDRQRDTDRRRARTPSRERVLEEEGIPRKDRTSWGDEEVEGVVGGGDDGGG
DRRGRGAGGRQRVPSDPDAVFEEHWSGDGPRSREGPGRERCHTHPPGEPGTARSSPQPAP
LDAAGGAVAGRIVHRAGGTVIAGQEYGLSDATQGLTRLDLRDQEVIDMEVARRLQEEEIL
ASNKDKHAAQVAQDEEIARLLAEQEKKEYKKIKEREKEKERMMMDRMAQDKKRQEAGLRP
HAEDVVRPRDAGRPRDDHGGPRTREELEHHRQRNHNKPTRPPQPRTPNYENVNPGPPYGY
SDNPFPPRGNTRPEAAYKVAEHRARPKERALGPEL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatttagcatcgaccagaaaaaactgcctccagtaaaagatgtgtgtcgtgac
tttgcagtgctggaagaccattgcctggcccataacctccaggagcaagagatcgagagc
cacctggcgtccaacgtccacaagagtcgcctggctcagcacgacctgaaggtggccaag
ctgctgcaagaggaggaggacatgagggccaaggcccagagcaagagacagttccgggac
ctagaacgccaagataatgagatcgcacaggggattcaggaggaactcgtccgacaggct
gagcagcagatacttcaggaagaaaaggacatggccatcgcgcgtaaaatgcaggagaag
gagatgaaggaggagaggaagagacagaagaagctggaggctaactttgaggaggagtac
ttcgaggatgaaggagggcgcccagacaaaaagggccatcccgcccccaggtcgcacagt
ggctccccgggccgcttcgacgagccccccgcctcgggtcgcccccgggaagagcgtttc
cgcgaggaccccgcgtccccctacagccgctcccaaaaccccaagcactacctggcggcg
gagggcgacgcccaccccgagcactcgctgccccctagaggccgccacggggataggcca
ccaggggaccacccggggcccgaggcaggccgggcccgcggcccgaggggggaggaggcg
gagagggtggtgcggaggaaggagaggccgcccaggcccccccccattgacctggaccgg
gactgggaccgggaccgggagagggaccacgagagacagcggaacagggagagggagaga
gtgagggacagggacagggagagagacccccggcggggccccgagcgacccagggcccgg
gggccggccggggaccaccacagggagccggacagacagagagacacggacagacggcgg
gccagaacaccgagccgggagcgggttctagaggaggaggggatcccgaggaaggacagg
acgtcatggggcgatgaagaggtggagggggtggttggtggtggtgacgatggggggggg
gatcggaggggcaggggagccgggggccggcagcgcgtgccctcggaccctgacgcggtg
ttcgaggagcactggagcggcgacgggcctcggagcagggagggtcccggcagggaacgc
tgtcacacgcaccctcccggagaaccaggtacagcccggagctccccccaaccggctcct
ctggacgcggcagggggtgcggtcgccggtcgcatcgtgcatcgcgccggcggcaccgtc
atcgcgggccaagagtacggcctgagcgacgccacccagggcctgacgcgcctggacctc
cgcgaccaggaggtcatcgacatggaggtggcgcggaggctgcaggaggaggagatcttg
gcgagcaataaagacaagcacgctgcccaagtcgctcaggatgaggaaatcgctcggctt
ctggcggagcaggagaagaaggagtacaagaaaattaaggagcgggagaaggagaaggag
aggatgatgatggacaggatggcgcaggacaagaagagacaggaggcaggcctcaggcct
cacgccgaggacgtggtccgtccgcgggacgcgggccggccccgcgacgaccacggaggg
cccagaacacgggaagagttggagcaccacaggcagaggaaccacaacaagcccaccaga
ccccctcaaccccgcaccccaaactacgagaacgtgaaccccggccccccctacggctac
tccgacaaccccttccccccccggggcaacaccaggccagaggcggcctacaaagttgcc
gagcaccgagctaggccaaaggagcgggccctgggacctgaactctga
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