Gadus morhua (Atlantic cod): 115555747
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Entry
115555747 CDS
T10832
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03030
DNA replication
gmh03410
Base excision repair
gmh03420
Nucleotide excision repair
gmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115555747 (rfc4)
03410 Base excision repair
115555747 (rfc4)
03420 Nucleotide excision repair
115555747 (rfc4)
03430 Mismatch repair
115555747 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115555747 (rfc4)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115555747 (rfc4)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115555747 (rfc4)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115555747 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
115555747 (rfc4)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115555747 (rfc4)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115555747 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
115555747 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_22
AAA_11
AAA_16
Gp44_lid
DUF815
Mg_chelatase
AAA_30
SLFN-g3_helicase
AAA_24
RuvB_N
AAA_19
AAA_5
ResIII
Cdc6_lid
AAA_7
AAA_28
Motif
Other DBs
NCBI-GeneID:
115555747
NCBI-ProteinID:
XP_030228622
Ensembl:
ENSGMOG00000008598
UniProt:
A0A8C4ZC55
LinkDB
All DBs
Position
12:complement(21666284..21672059)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSVQSSKLQKDKGAPGTSTEKRVRPVPWVEKYRPKCVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAASRELFGPQLYKQRVLELNASDERGIQVVRHKVKN
FAQLTVAGTRTDGKRCPPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANWIQEERLLEICSKENLKYSKEGIAALVKVSEGDLRKAITFL
QSAARLVVDQEITEKTIVEIAGVVPSKMIDNLLQTCFKGTFEKVQIAIKDMVDEGYAATQ
ILIQLHESIIEQDLNDKKKSAITEKMAVVDKCLADGADEYLQLLSLCSIIIEQSSTN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggtacgtctgtccaatctagcaaactccagaaggacaaggga
gccccgggtaccagcacagagaagagagtccgacctgtcccttgggtcgagaaatacagg
ccaaagtgtgtggatgaagttgcttttcaagacgaggtggtagcagtattgaagaaatct
ttggaaggggcagatctacccaacttgctattctatggtcctcctggaacaggaaagacc
tcgaccatcctcgcagcatccagggaactctttggtccccagctgtacaaacagagggtg
ttggagctgaatgcctcagatgagcgtggcatccaggtggtccgccacaaggtcaagaac
tttgcacagctcaccgtggctggaacacgcacagatggaaagaggtgccctccctttaaa
atcatcatcctggacgaggctgactccatgaccgggccagcccaggcagccctgaggaga
accatggagaaggagtctcgcacaacacgtttttgtctcatctgcaattatgtcagcagg
atcatcgagccgctgacctccaggtgttccaagttccgcttcaagccccttgccaattgg
atccaagaggagcggttgctggaaatctgttcaaaggagaacctgaagtactccaaagag
ggtatagcagcgttggtgaaggtgtcggagggggacttgcgtaaggccatcacattcctc
cagagcgcagcacgcctcgtcgtagaccaggaaatcacagagaagaccattgtggagatc
gccggagtagtcccttccaaaatgattgacaacttacttcaaacctgcttcaaagggact
tttgagaaagttcaaattgccattaaggacatggtggatgaaggctatgcagccacacag
atcctgatccagctccacgagagcatcattgaacaggacctaaatgacaagaaaaagtca
gccatcacagagaagatggcggtagtggataagtgcttggcggatggagccgacgagtat
ctccagctgttgagcctgtgttcgatcattattgaacagtcctctaccaactga
DBGET
integrated database retrieval system