Gadus morhua (Atlantic cod): 115555810
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Entry
115555810 CDS
T10832
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmh03009
]
115555810 (ddx49)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115555810 (ddx49)
Ribosome biogenesis [BR:
gmh03009
]
Eukaryotic type
90S particles
Helicases
115555810 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
115555810
NCBI-ProteinID:
XP_030228704
Ensembl:
ENSGMOG00000007556
LinkDB
All DBs
Position
12:4201922..4207223
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AA seq
480 aa
AA seq
DB search
MSDFSSLGLADWLIKQCKQLGINKPTPVQENCMPPILEGRDCLGCAKTGSGKTAAFVLPV
LQKLSQDPYGIFCLVLTPTRELAYQIAEQFRVIGKPLGLRDCIVVGGMDMVTQSLELSRQ
PHVVVATPGRLADHIRSSNTFSLKRIQFLIMDEADRLLEQGCTDFTKDLEVILGALPAKR
QTLLFSATLTDTLQELQSLTMNKPFFWESKSETRTVEELDQRYILAPEKIKDAYLVHLIQ
NFTDQHSDWSIIIFCKTCKDCQILTMMLRKFNFPTISLHSMMKQKVRFANLSKFKASVYK
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITMVTQYDIHLV
HAIEEQTQSKLKEYEVEEKDVLKILTQVNVTRRECEIRLEATDFDEKKEVHKRKQLILEG
KDPEMEAKRKAELEKIKKHKKKFKERVQESVLQQQAEQRQRSLLKKKRRLEQKKAKLEAK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttctcctcgcttggcctggccgactggctgattaagcagtgtaaacaacta
ggaataaacaaacccactcctgtccaggagaactgcatgccacccattctcgaaggtcgg
gactgtttgggctgcgccaagacgggcagtggaaagactgctgcgttcgtcctgccggtg
ctacagaaactatcccaagacccctacggtatcttctgcctggtcctcacacccaccagg
gagctggcatatcagatcgcagagcagttccgggtcattggcaagcccctgggcctgcgg
gactgcatcgtcgtgggtgggatggacatggtgacacagtccttggagttgtcgcggcaa
cctcacgttgtcgtggcgacaccgggaagattggcggaccacatccgtagctccaacacc
ttcagcctgaaaaggatacagtttctgatcatggacgaggcagacagactgctggagcag
ggctgtactgacttcaccaaggacctggaggtgatcctgggggcgctgccggccaaacgg
cagacactgctgttcagcgccacgctgaccgacacgctgcaggagctgcagagcctcacc
atgaacaagcccttcttctgggagagcaagtctgagacccggacggtggaagagctggac
cagcggtacatcctggccccggagaagatcaaggacgcctacctagtccacctgatacag
aacttcaccgaccagcacagcgactggtccatcatcatcttctgcaaaacctgcaaggac
tgccagatcctgacgatgatgctacgaaagtttaacttccccaccatctctctccactcc
atgatgaaacagaaagttagattcgctaacctctccaaattcaaagccagcgtctacaaa
atcctgattgcgacagatgttgcttccagggggttggacataccaacggtccaggtggtc
atcaaccacaacacgcctggcttgcccaagatctacatccacagagtgggccggaccgcc
agggccgggaggaacggagtctccatcactatggtgacgcaatatgacatccacttggtc
catgcaatcgaggaacagacacagtcgaagctaaaggaatatgaggtggaggagaaagac
gtgttgaagatcctcacccaggtcaacgtgacaaggcgggagtgtgagatcagattggaa
gccaccgactttgatgagaagaaagaggtccacaagaggaaacagcttatactagaagga
aaggacccagagatggaggccaagcggaaggcagagttggagaagatcaagaagcataag
aagaagttcaaggagcgggtccaggagagtgtgctgcagcagcaggcggagcagcggcag
aggagccttctgaagaagaagagacgactggagcagaagaaggccaaactggaagctaaa
tga
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