Gadus morhua (Atlantic cod): 115555842
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Entry
115555842 CDS
T10832
Name
(RefSeq) mast/stem cell growth factor receptor Kit-like isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115555842
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115555842
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmh01001
]
115555842
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmh04090
]
115555842
Enzymes [BR:
gmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115555842
Protein kinases [BR:
gmh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115555842
CD molecules [BR:
gmh04090
]
Proteins
115555842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
VEGFR1-3_N_Ig-like
DUF3046
Ig_6
Motif
Other DBs
NCBI-GeneID:
115555842
NCBI-ProteinID:
XP_030228745
Ensembl:
ENSGMOG00000010319
LinkDB
All DBs
Position
12:complement(4479762..4508141)
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AA seq
990 aa
AA seq
DB search
MEYHWILFSVVLQLTIHPGRPRPTIAPGGAHLVVPLNSPLSLRCSGQRVVQWRREAGSRV
RGEVRTPGMSVLHVPRATAVQMGRYVCLEESTGEQASIYVYVKDPDNAFRRSMVFNILTR
VGDSVSIPCLATDPALVNLRLETCKGRALAPGLQYSATLEAGVTIYSTEKAFEGCYVCSG
QLGEAEVRSGRYDLTVRPAPVAPPEIHLQAPKRMILTKGQSLSLACNTSNANGDIKLKWN
TPPGSGAVWYPQQPAQVASASHILAENFTHVRSAVLRIKAVLAQDAGRYQCEALNEKGAS
TKSVWLEVYAKGFIHVRPVENSTIKVRSGESLSLVVSMEAYPKPNNFTWNFMGQALANTT
DHVITTDNHSHSYSSELRLVRLKMAEGGVYTFYASNGDATVNQSFTVFVISKPEIVSHEG
PVDGQVRCVAEGFPAPQISWYYCEKPYVRCSQQVNSTLEEQDVITITVFSPLFGKTGVES
RVNVSTRRFHTLECVATVEGEQAYTLFSISAERRVTHALFTPLLIGSVSAATVLCLVLVV
LFYKYLQKPKYQIQWKVIEGIHGNNYVYIDPTQLPYDNQWEFPRDKLRFGKTLGSGAFGK
VVEATAYGLSKADSVMTVAVKMLKPSAHATEKEALMSELKVLSYLGNHMNIVNLLGACTV
GGPTLVITEFCCFGDLLNFLRRKRETFFSSKMEDDCYYRNILRHSNPGSDGRNGYMVMNP
SGTDPSPCTSSSERRRSLRKGGSNSDEDVTSQMLQEDSLSLDTEDLLSFSYQVAKGMDFL
ATKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSLESIFE
CVYTFESDVWSYGILLWEIFSLGNSPYPGMPVDSKFYKLIKEGYRMDAPDFAPSEMYQIM
RSCWDADPCQRPPFRKIVERIEKQLSDTTKHIYLNFNSRITGSAGARGDPPTQNASLHYP
NPGILGTHSQPLLAQDEVFLEGMSLRAHRV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggaataccactggatattgttttctgtcgttttgcagttaaccattcatccagggcgt
cccaggccaaccatcgccccgggtggtgctcacctggtggtgcccctcaacagccccctc
agcctgcgctgctccggccagcgggtggtgcagtggcggcgggaggccgggtcccgggtt
cggggggaggtgaggacccctgggatgtctgtcctccacgtcccccgcgccacggctgtc
cagatgggccgctacgtctgcctggaggagagcaccggggagcaagcctccatctacgtc
tacgtgaaagaccctgacaatgccttccggaggtccatggtgttcaacatcctgacgcga
gtgggagacagcgtctccattccctgcctggccaccgacccggccctggtcaacctgagg
ctagagacctgcaagggccgggcgctggccccgggcctccagtactcggccaccctggag
gcgggcgtcaccatctacagtacggagaaggccttcgagggctgctacgtgtgcagcggg
cagctgggagaagccgaggtccgctcaggccgctacgacctgaccgtgcggccagccccg
gtcgcccctcctgagatccatctccaagccccgaaacgcatgatcctgaccaagggacag
agcctctccctggcctgcaacaccagcaacgcaaacggcgacatcaaactcaagtggaac
actccccctggctcgggtgccgtctggtatccacagcagccagctcaggtggccagcgcc
tctcacatcctggccgagaacttcacccacgtgcgcagcgctgtgctccgcatcaaggcc
gtgctcgcccaggatgccggccgctaccagtgcgaggcgttgaacgagaaaggcgcgagc
accaagtcggtctggctggaggtttacgccaaaggtttcattcatgttcgcccggtggag
aacagcaccatcaaggtgcggtcgggggagagcctgtccctggtggtcagcatggaggct
taccctaaacccaacaactttacctggaacttcatgggccaggccctggccaacaccacc
gaccatgtgatcaccacagacaaccactcacacagttacagcagtgagctgaggttggtt
cgcctgaaaatggctgaagggggcgtgtacacgttttacgcctccaacggcgacgccaca
gtcaaccagtccttcacggtcttcgtgatcagtaaaccggaaattgtttcacacgagggg
ccggtggacggacaggtgcgctgcgttgccgagggcttcccagcacctcagatctcctgg
tactactgcgagaagccctatgtcaggtgctcccaacaggtgaacagcactctggaggag
caggacgttatcacaatcaccgtcttcagcccgctgttcggcaagaccggggtggagagc
cgcgtgaacgtcagcacccgcaggttccacacactggagtgcgtcgcaacagtggagggg
gagcaggcctacaccctcttctccatcagtgcagagaggagggtcactcatgccctcttc
acccccctgctcattggctcagtgtctgccgccaccgtcctgtgcctggttctagttgtg
ctcttctacaagtacctgcagaaacccaaataccagatccagtggaaggtcatcgagggc
atccatggcaacaactatgtgtatattgaccccacccagctgccgtatgacaaccagtgg
gagtttcccagagacaagttgcgattcgggaaaacgctgggatcgggggcgtttgggaag
gtggtagaagctacggcgtacggactatccaaggccgactcagtcatgaccgttgccgtg
aaaatgctcaaaccaagtgcccacgccacagagaaagaggcactgatgtccgagctcaaa
gttctcagttacctcggaaaccacatgaacatcgtcaaccttttgggagcctgcaccgtt
ggaggtccgaccctggtgatcactgagttctgctgcttcggtgacctgctgaacttcctg
cggaggaagagggagacattcttcagctccaagatggaggatgactgctactacagaaac
atcctccggcatagtaaccctggcagcgacggcaggaacggctacatggtgatgaatcct
tctggcactgacccatcgccctgcacctcctcgtccgagaggaggcgctcgctacgcaaa
ggcgggtccaacagtgacgaggacgtgaccagtcagatgctgcaggaggacagtctgagc
ctcgacacagaggacctgctcagcttctcctaccaggtcgccaaggggatggacttcctc
gccaccaaaaattgtattcacagagacctagcagccagaaatattctgctgacccagggg
agagtggccaagatctgtgacttcggtctggcccgggacatcaccactgactccaactat
gtggtcaaaggcaatgctcgtctgccggtgaagtggatgtcgctggagagcatcttcgag
tgtgtgtacaccttcgagagcgacgtctggtcctacggcatcctgctctgggagatcttc
tcactcggaaatagcccttacccaggtatgccagtggactccaagttttacaagctgatt
aaggagggctacagaatggacgccccagactttgccccgagcgaaatgtaccagatcatg
aggtcctgctgggatgcagacccctgtcagagaccacccttcaggaagatagtagagaga
atcgagaagcagctgtcagacaccaccaaacacatctatctgaactttaactcgaggatc
acagggtccgccggggccaggggggacccaccaacccagaatgcatcactacactatcct
aaccctggcattcttggcacccacagccagccgctactggcccaggacgaggtcttcctg
gagggaatgagcctaagggcacaccgtgtgtga
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