Gadus morhua (Atlantic cod): 115556115
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Entry
115556115 CDS
T10832
Name
(RefSeq) 5-hydroxytryptamine receptor 3C-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115556115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115556115
Ion channels [BR:
gmh04040
]
Ligand-gated channels
Serotonin (5-HT3)
115556115
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Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115556115
NCBI-ProteinID:
XP_030229112
Ensembl:
ENSGMOG00000023716
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Position
12:8401900..8405861
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AA seq
472 aa
AA seq
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MELKKGIWLIYLHLMLFHVNGSALNCTWPNAESLYDALDETIFSKNHLRPVNLLETPTNV
SISFILVGILGVNEKAQTFTTFLWIRLEWIIEGLTWDEKECGSEKLSVKRENLWIPDIFI
LEFMDEDQSPITPYVYIDSRGHVMDEKPLRVVSSCKLGILKFPFDVQNCSLSFGSFIHYD
SAIRMVLGLSAERILSQSREVLQTEGEWELLNITAAESLLSLDGGGYHDIVFNILLKRRP
VLYVVNLLIPSCFLNTVDLFSFLLPPQSVDRSAFKMTLILGYTVFLLIMNDLLPVTGNTT
PAINVFFSISLGMMVGSLLETLFITHIQNSSNPHVPRWVRIVVLQYLAPIVCLTNKQQIN
RVTVDLNPNPTQLVTTVGMQAPFRIHHLEIKPRPIAVDHQPEKSAHDPVMEELRKLSQDL
RTISRLVERHFKEPQTLCDWTFIGIVLDRFLFLNYVLFLFSTLVAISVLWTS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaaaaaggaatttggctgatctacctccatttgatgttgtttcatgtcaat
gggtcagctttaaattgcacctggccaaatgctgaatccctttatgatgcgcttgacgaa
acaatattttcaaagaaccatctacgccctgtgaatctgcttgaaacaccaacaaatgtc
tccatctctttcattttggttggaattctcggagtaaatgaaaaagcacaaacatttaca
actttcttatggattcgtcttgagtggatcattgagggtttgacctgggacgagaaggaa
tgtggttcagagaaactgtcggttaaacgtgaaaacctgtggattccagacattttcatc
ttagagttcatggatgaggaccagtcacccataactccctatgtctatatagacagcagg
ggtcatgtcatggatgagaaaccactcagagtggtgagctcctgcaaattaggaattctc
aagttccctttcgacgtccaaaactgtagtttatcctttggatcctttatccactatgat
tcggcaattcgcatggttctgggcctgtctgcagaacggattctgagtcagagcagagaa
gttttacagactgaaggggaatgggaactcctaaacatcacagcagctgagagtttgtta
tctttggatggtggaggttaccacgatatagtattcaatattttgctcaagcgtagacca
gtcctctatgtggtcaacctgctcatccccagctgcttcctgaacacagtggacctcttc
agcttcctgctacccccacagagtgtggaccgctcggcctttaagatgaccctcatctta
ggctacaccgtcttcttgttgattatgaatgacttgcttccggtcaccgggaacaccaca
cccgccatcaatgttttcttctccatcagtctaggtatgatggtggggagccttttagag
accctattcatcacccatatccagaactcaagtaaccctcatgtacctcgctgggtccgc
atcgttgtgctccagtacctagccccaatcgtctgcctgaccaacaaacaacaaattaac
cgggtcacagtcgacctcaacccaaacccaacccaactagtgactactgtgggcatgcag
gctcctttccgtatccaccacctggagataaagcctcggcccatcgcagtggatcaccag
ccagagaaatcagcccatgatcctgtgatggaggaactgaggaagctgagccaagacctt
cgcaccatcagccgcctggtggagagacacttcaaggaaccacagactctgtgcgattgg
acatttatcgggattgttcttgaccggtttctgttcttaaactatgttctcttcttgttt
tccaccctcgtcgccatcagtgtcttgtggacatcttaa
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