Gadus morhua (Atlantic cod): 115556123
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Entry
115556123 CDS
T10832
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115556123
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
115556123
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
CCL2-like
Motif
Other DBs
NCBI-GeneID:
115556123
NCBI-ProteinID:
XP_030229123
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Position
12:28605510..28623841
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AA seq
1008 aa
AA seq
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MYRWKNCSDEPNPARLSWSINENITLICCGEQHTLFLTGDGTVLSCGQNSKGQLGRNSLE
DLTKPGRVSGCSRAVSLACGQDHCLSLSATGDLHSWGAGGDGQLGVGRTTPVVQTPSLLH
FRVPVIQVACGNSHSLALTKAGDVFSWGSNSHGQLGLGKDVCVQPCPALVLSLTGIPVTL
VVAGGTHSLFIALSGLVYCCGNNKLGQLGLNRVDEKGRFRIMPVPSLKPIEVATASCGAE
HSVVLTKDGKVLTFGDGSHGQLGHRSTAGELIPRQVQGIDEPVAQIACGSHHTLILGSSG
HIWTFGSRVKGQSGSDGSLVQVPWTTDGAAAVPNELKIAAGWNTNFLYSAAESLTRDRHL
TIRRFDEKKLKKWQAMEIGDQEAIEEILSMFVSSSSLVAAFAKPNLSPSTTGELIADVEA
AAKTFDQMMQIPWIKQRIVFADIVDPLLKAMSVLKSPDVLLVLLTCPLLQEDHNVIDEVI
PLALIISGLNEKMSGLIRGCWSSLPPAILTRHIAVFKWALSFFLRNKLLVSHDNMVKMVL
ETLRMLFKANKAGRSLKVPLSTFYIDQIEHLYDPVVDVGLWAACYQKEEDENTPAIFCRF
PFVLNLPCKLTAFSICTIFLKDKQRRELLVSQAEIDSSILENPEAVPGFQLKLRQTNLVE
DTFRHLSSADHSLFESQILVQFKEALELTEISKEDFFINVFEELMNPGSNMFMYNEGQTL
AWFPAQVEPPKLEKYFLFGVLCGIALYNHHIIKLPFPLVLFKKLVNVKPSYQDMKEFQPV
VAEGLRCILEDYTSEDFEKLDLSFRVDWDGREVELDSTTEGKPVSFSNKKEFFDAYINYA
FNQSVEPVFEEFKRGFFKVCIREVVEFFEPKELRSLMVGQEFTDWNVMKQNTVYAGEYSE
THPNILTFWEVFEELTGDKKKDFLLFLTGLDRVPIIGISEVKMRVAILPNSTELHFPEAI
PCQSMLLLPNYRRYPTKRRLRSMLSAAIRYTKGSWQDKLNKFGHTIYP
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggtggaaaaactgctccgatgaaccaaacccagctcgtttgtcgtggagcatc
aatgaaaacatcacactaatttgttgtggtgagcagcatactttattcctcaccggcgat
ggcacagtgttgtcctgcggccaaaactccaaaggacaacttggtcgaaatagtctcgaa
gatctgacgaagccaggacgtgtgtcaggttgtagcagagcggtgagcttggcctgcggt
caggaccactgcctctcgctgtctgcaactggagacctgcactcatggggggctggtggc
gatggacaactgggcgttggacgcacaacgcctgtggtccaaacaccaagtcttctgcat
ttccgtgtaccagtaatccaagtagcgtgtggaaactcccattccttggctttgacgaaa
gccggagacgtcttttcgtggggctccaacagtcacggccagctggggctagggaaggat
gtgtgcgtgcagccctgtccggccctggtgctctctctcacggggataccggttaccctg
gtggtggccggcgggacccacagcctgttcatcgctctctcaggcctggtctactgctgt
gggaacaacaaactgggccaactgggactcaacagagtggacgagaagggtagatttaga
attatgccagtaccatccctcaaaccaatagaggtcgccactgcaagctgtggcgcagaa
cactcagttgtcctgacaaaggatgggaaggttctcacctttggtgatggaagccacggt
cagctgggccatcgttctactgccggtgaactcatcccccgacaggtccagggcatcgac
gaacccgtcgcacagattgcatgcggcagccaccacaccttaatattgggctcatccggc
cacatttggacctttggcagcagggttaaaggtcaaagtgggagtgatggttctcttgta
caagtgccatggaccactgatggtgcagcagctgtacccaatgagttgaaaatagcggct
ggatggaacacaaactttctctactcagccgccgagagtttgacgagggaccgtcacttg
accataaggcggtttgatgaaaaaaaactaaaaaagtggcaggcgatggaaataggcgat
caggaggctatagaggaaatactgtctatgtttgtttcaagttcgagccttgttgctgct
ttcgcaaaacccaatctgtctccatcgactacaggggaattgattgctgatgttgaggct
gctgccaagacttttgatcagatgatgcagattccatggatcaaacaaagaatcgttttt
gccgatattgtcgatcctctcctaaaagcaatgtctgtgctgaagtcccctgatgtactc
ctggttcttctgacatgtcctcttctccaagaggaccacaacgtgatagatgaggtcatc
cccctggctctcattatcagtgggcttaatgaaaagatgtccgggttaataagaggctgt
tggtcttccctgccccctgccatcctgaccagacacattgccgtgttcaaatgggccctg
tccttctttctccggaataagcttctggtgtctcatgacaatatggtaaaaatggttctg
gagaccctcaggatgctcttcaaggctaataaagcggggcggtccctgaaggttccactg
agtactttctacattgaccaaatagaacacttgtacgatcctgttgtggatgtgggcctt
tgggctgcatgctatcaaaaggaggaggatgagaacacaccagccatattctgccggttt
ccatttgtgttaaatctcccttgcaagttgaccgcctttagcatctgcacaatttttctc
aaggataaacaacgtcgagagttacttgtttcccaggcagaaattgacagtagtatcttg
gagaaccctgaagcagtgccagggttccagctcaaactgagacaaacaaaccttgttgaa
gatactttccgccacctgtcttcagccgaccactctcttttcgagagccaaatcttggtg
cagttcaaagaagcactggaactgacagagatcagcaaagaagacttcttcatcaacgtg
ttcgaggagctcatgaaccccggttcaaatatgttcatgtataacgaaggccagacgcta
gcttggttcccggcccaggttgaaccgccaaaattggagaagtacttcctgtttggagtt
ctatgtggcattgccttgtacaaccaccacatcatcaaactgcctttcccattagttctc
ttcaagaagctggtcaacgtgaaaccatcctatcaagacatgaaagaatttcagccagta
gtagcagagggtttgcgttgcattttggaagactacacctcagaggactttgagaagttg
gacctcagcttcagggtggactgggatggcagagaagtggaacttgattcaacaacagaa
gggaagcctgtctcattttccaacaagaaagagtttttcgacgcctacatcaactacgcc
ttcaaccaatctgtagaaccggtgttcgaggagttcaagaggggcttcttcaaggtgtgc
atcagagaagtggtggagttcttcgaaccgaaagagttacgaagcttgatggtgggccag
gagttcactgactggaatgtgatgaagcagaacacggtgtatgctggagagtacagcgaa
acacatcccaatatcttaaccttctgggaggtatttgaagaactgactggggacaaaaag
aaagattttctcttgttcctcacaggtctggatcgtgtacccattatcggtatatcagaa
gtaaagatgagggtggcgatccttcccaattccacagaactccatttcccagaagccatc
ccctgccaatccatgttactgctaccaaactacaggagatatcccaccaagaggaggcta
agaagcatgctgtcggcagccattcgctacactaaaggatcctggcaggacaaacttaat
aagttcgggcacaccatatatccgtaa
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