Gadus morhua (Atlantic cod): 115556158
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Entry
115556158 CDS
T10832
Symbol
dnajc6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115556158 (dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmh03041
]
115556158 (dnajc6)
03110 Chaperones and folding catalysts [BR:
gmh03110
]
115556158 (dnajc6)
04131 Membrane trafficking [BR:
gmh04131
]
115556158 (dnajc6)
Spliceosome [BR:
gmh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115556158 (dnajc6)
Chaperones and folding catalysts [BR:
gmh03110
]
Heat shock proteins
HSP40 / DNAJ
115556158 (dnajc6)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115556158 (dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
115556158
NCBI-ProteinID:
XP_030229165
Ensembl:
ENSGMOG00000005812
LinkDB
All DBs
Position
12:complement(1877489..1935190)
Genome browser
AA seq
970 aa
AA seq
DB search
MSLLSGYKKKTSYDGYESLQLVDSGGDSFNFGGRGSSSHTIGSSLAASLGPKGSPLREHD
CSTMDSSDMEANYGGGLLDMVKGGAGKFFSNFKDNLKDTLKDTSTKVMHQVATYTKGELD
IAYITSRIIVMTYPAESAQIGYQNHVEDIRSFLDSRHADHYTVFNLSQRNYRGAKFSNRV
SECNWPSRQAPSLHNLFAVCKNMHNWLKQNPKNVCVITCSDGHAPSGVLVGAMFCFCHLF
ANPVPAMQLLSAKRPGSGLWPSHRRYIGYVCSMVSERPSLPHSKPLVIKTLTMSPVPCFN
KQRSGCRPFCDVLIGETRIFSTAQDYERMREYRVQDGKVVFPLGVSAQGDVVISLYHMRS
TIGGRLQAKVSNTQIFQMQFHTGFIEPGSTMLKFNKPELDACDAPEKYPELFSIMVEVEV
EATDKQKDLTPPWEQFPCKDLGPNVLFTCHQEHQDALAIAEPSRPPGGPEGRGHGEESEP
SDDEILSLSSHQSITSTTAAAKPSSTTSAATSVEADLLGLGGAAMDPAGQPSHTASVANN
NTNTTTGAAATTDLLGDLFGTQSSPASAASSAKSTPHKVAASGASPCPSPAPAAFNPFGA
APTPKPLELMGSIMGPGRGSPVPPTTPTVNVQQQNAMGGWDWNRPAGAAGFGVGSRSATS
SPTGSVHSTPTHQSKPNTLDPFADLGSLGGGSGFSSKPTTPTGTTPVFPPMGSPSRPPPS
PQHVGGWPTHAGVVGFPSWQPGSAGAGSVGPAVAGCAPGGGGVAGGIGCGGAGGWPHPGP
RPQSKPSPSHTPIAHGSPQNRPNYNVHFNPMGGGSPGAVGQKASAGMPAPRPKVSNANFD
DLLSGQGFCGTKEKKGPRTIAEMRKEEMAKEMDPEKLKILDWIEGKERNIRALLSTMHTV
LWEGETRWRPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSE
FDSQGQKPLY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttgagcggctataagaaaaagaccagttatgatggctatgaatctttgcag
ttggtcgatagcggcggggatagcttcaatttcggagggcgaggtagcagcagccacaca
atcggcagctcgttagcagctagcctcggaccgaaggggagcccgctccgggagcacgac
tgcagcaccatggacagctcagatatggaggccaactatggtggcggtctgctggacatg
gtgaagggcggcgccgggaagttcttcagcaacttcaaggacaacctgaaggacacactt
aaggacacctccaccaaggtcatgcaccaggttgccacgtacacaaaaggggagctggat
attgcttacatcacgtcacgaattatagtgatgacctacccagccgagtcggcacaaatt
ggctatcagaaccacgtggaagacatccgctccttcttagacagtcgccatgccgaccac
tacacagtcttcaacttatcacagcgtaactaccgtggagccaagttctccaaccgggtt
tcagagtgcaactggccttccaggcaggcaccaagcctacacaacctgtttgctgtgtgt
aaaaacatgcacaactggctcaagcagaaccccaagaacgtgtgtgtcatcacctgctcg
gacggtcacgccccctccggcgtgctggtgggtgccatgttctgcttctgtcacctcttc
gctaacccggtgcccgccatgcagctcctcagcgccaagaggccaggctctggactctgg
ccatcccaccgcaggtacatcggctacgtgtgtagcatggtgtcggagaggcccagtctg
ccgcactccaagcccctggtgatcaagaccctgacaatgagccccgtgccctgcttcaac
aagcagcgcagcggctgcaggcccttctgtgacgtccttatcggagagaccaggatcttc
agcacagcgcaggactatgagaggatgagggagtaccgtgtgcaggacgggaaggtggtg
ttccccctgggcgtgagtgcccagggggacgtggtgatctccctctaccatatgaggtcc
accatcgggggccgcctgcaggccaaggtgtccaacacccagatattccagatgcagttc
cacactggcttcatagaacccggcagcaccatgttgaagttcaacaaaccagagctggat
gcgtgcgatgctcctgaaaagtacccagagttgttcagcatcatggtggaggtggaggtg
gaggccacagacaagcagaaggacctcaccccgccctgggagcagttcccctgtaaagac
cttggcccaaacgtcctcttcacctgtcaccaggagcaccaggacgcccttgctatagct
gagcctagccggccccccggcggtccggagggccggggccacggggaggagagcgaaccc
tcggacgatgagatcctctctctctccagccatcagagcatcaccagcaccaccgccgca
gcaaaaccctcctccaccacctccgctgccacctcggtggaggccgacctcctgggtctc
ggcggggcggccatggacccggccgggcagccgtctcacaccgcctccgttgctaacaac
aacaccaacaccactactggtgccgccgctaccacagacctgctgggggacctgtttggg
acccagtcctcaccggccagtgcagcctcctctgccaagtccacgccacacaaagtggcg
gcaagcggggcctctccctgcccctcgcccgcaccagcagcgttcaacccgttcggagcc
gcccccacaccaaagcccctggagctgatgggctccatcatgggaccaggtcgaggttcc
ccagttccacccaccacccctactgtcaacgtccagcagcagaacgccatgggaggttgg
gactggaacagaccggcaggcgcagcaggctttggcgtgggcagtcgctcggcaacaagc
agtcccacaggctccgtccacagcaccccgacccaccagtccaagccaaacacgctggac
ccttttgctgacctcggcagcctcggaggaggctccggcttttccagtaagcccaccacc
ccaacgggcaccaccccggtcttcccacccatgggctccccctccaggccccccccctcc
ccgcagcatgttgggggctggccgacgcacgccggggttgtgggcttcccctcttggcag
cctggtagtgctggtgctggtagtgttgggccggcagtggctggatgtgctcctggtggt
ggaggtgtcgctggtgggattgggtgtggtggagctggtgggtggccgcacccgggccca
cgcccacagtccaagcccagccccagccacacccccatagcccacggctctccccagaac
agacccaactacaacgtccacttcaatccgatgggcggaggctccccaggtgctgtgggg
cagaaggcctcggctgggatgccagctcctagaccaaaggtgtcaaatgccaactttgat
gacctgctgtctggtcagggcttctgcgggaccaaggagaagaagggacccaggacaata
gctgagatgaggaaggaggagatggccaaagagatggaccctgagaagctcaagatcctt
gactggatcgagggtaaggaacgcaacatccgcgcgctgctgtccaccatgcacacggtg
ctgtgggagggggagacgcgctggaggcccgttggcatggctgacttggtgacccccgag
caggtgaagaaggtgtaccgcaaggccgttctcgtggtccatccggataaggccactggc
cagccctacgaacaatatgccaagatgattttcatggagctcaatgacgcctggtcagaa
tttgatagccaaggacaaaagcctctctactga
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