Gadus morhua (Atlantic cod): 115556186
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Entry
115556186 CDS
T10832
Name
(RefSeq) vesicle-trafficking protein SEC22b-B isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04130
SNARE interactions in vesicular transport
gmh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115556186
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115556186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115556186
Membrane trafficking [BR:
gmh04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
115556186
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
115556186
NCBI-ProteinID:
XP_030229199
Ensembl:
ENSGMOG00000018174
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Position
12:complement(28343176..28346746)
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AA seq
219 aa
AA seq
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MVLLTMIARLADGLPLAASMQEDEQGSEKLGRDLQQYQSQAKQLFRKLNEQSPSRCTLEA
GSMCFHYVIEKGVVYLVLCEAGFPKKLAFAYLEDLQTEFNEQHGKKVQTVSRPYSFIEFD
TYIQKTKKSYIDSRARRNLGNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSL
SKKYRSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgaccatgatcgcccggctggcggacggcctgccgctggccgcttccatg
caggaagacgagcagggaagtgaaaagctgggccgagacctccagcagtaccagagtcag
gccaaacagctcttccggaaactcaacgagcaaagtccttcacgctgtactttagaggct
ggctccatgtgcttccattacgttatagagaaaggagtggtctacttggtgctgtgtgaa
gctggatttcccaagaagctggcctttgcgtatttagaagatcttcagacagagtttaat
gagcagcatggaaagaaagttcagacagtgtccaggccgtactccttcattgagtttgac
acgtacatccagaagaccaagaagtcgtacatcgacagccgagccaggaggaacctgggc
aacatcaacaccgagctgcaggacgtccagaggatcatggtggccaacatcgaggaggtt
ctccagcgaggagaggcgctgtctgcgcttgactccaaggcaagcaacctgtccagcctg
tcgaagaagtaccgcagcgacgccaagtacctgaacacgcgctccacctacgccaagctg
gcggccggcggcgtcttcttcatcatgctcatcgtctacgtgcgcttctggtggctctag
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