Gadus morhua (Atlantic cod): 115556320
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Entry
115556320 CDS
T10832
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115556320 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115556320 (usp24)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115556320 (usp24)
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115556320 (usp24)
Ubiquitin system [BR:
gmh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115556320 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
115556320
NCBI-ProteinID:
XP_030229379
Ensembl:
ENSGMOG00000016350
LinkDB
All DBs
Position
12:17644474..17703357
Genome browser
AA seq
2638 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPT
TGSGTGGDGENSGRTGTGGFDPPPAYHDVVDSERSNDENGNCSGGSMEFPTTNLYELESR
VFTDHWSIPYKREESLGKCLIASTCLARHGLADADENCKRFMDRCMHEAFKKLLTSSAVH
KWGTEIHEGIYNMLMLLVELAAERVKQDPIPVNLMGVLTMAFNPDNEYHFKNRMKACQRN
WAELFGEEANMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQTKLNTEEIEIACVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPDLLSAIKLLCM
RFQRELVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTVSKTVKNAIDTDKLL
DWLVENSVLSIALEGNIDQAQYCERIKGIIELLGSKLSMDELSKIWRIQAGQSSTVIENI
HTIIAAAAVKFNFDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLE
VLWELAHLPTLPTSLVQQASEEHLGILSDAYAVKETIKRSYIIKCIEDIKKLQIQEESKG
SESQSSFLTGSWGKRKANTSVKASQQSSPQAVWVVPALRQLHEITRSFIKQTYQKQDKSI
IQDLKKNFEIVKLITGSLVCCHRLAVTAAGNNGLSSSTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKEIWECLVSGPDVCEQDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLVGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRYTAGGSGSTKLVIIERLLLLAERYVLTIEDQYSVPRTILPH
GASFNGHPVTLHVTYESTKDTFTLEAHSNETIGSVRWKISEHLSCPVDNVQIFANDSVLT
MNRDQKLLSQLGFSDEQSLTVKSSSTGTPSGSSESSTSASSSSSSAVFNSAYALEQEKSL
PGVVMALVCNVFEMLYQLANLDESRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSH
QKTLFTLGQSAGSRSPSMSSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLM
PTSDDEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFL
LVGQSMPASLDDDNLRDGDALSSRPFRNAGRAGRQLSLCGTPEKSSYRQMSLSERSSIRV
EEIVPAARVAIQTMEVGDYTSTVACFMRLTWAAAAGRLDLVGSPQPIRDSHSSLLPQGVR
TRVSSTGSNCSSSSEGEGTPTALHAGICVRQQSVSIKDTIIAREALSLLVTCLQLRCQQL
SSFYNLPSVNDFIIDILLGSSSGEIRRVACDQLYTLSQSDTSGLQEVQKPNLFLLTVVLS
AQLPLWSPTSVMRGVNQRLLSQCTEYFELRCQLLDDLTSSEMEALKLSAANMLEDEISWL
DNFEPSWGSEMETSEADNILQAGHLRLIKTLLSLCGKEKEQLGPSLIQQLLDDFLFRASR
IIINSSNPAPAPTPSHDFHPKCSTASSRLAAYEVLVMLADSSLPNLQLITKELLSMHHTP
DPSLSKEFDYLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLPEAILSIEDDTEQ
PEESVFCQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLD
EHLKKIGREQLFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFV
RGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIKF
PWVLNMEPYTVSGMARQDCSGEAGEGRGDGAAGGSPRKKVTISENYELVGVVVHSGQAHA
GHYYSFIKDRRGGARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVR
RRYWNAYMLFYQRISDQNSPVLPKKSRVSVMRQEAEDLTLQTQVSHSPHSSAPSSPDISP
QSSPRPPRANNDRLTLLTRLVRKGEKKGLFVEKMPASIYQMVRDENLKFMRNRDVYNSDY
FNFTLSLASVNATKLKHPDYQAMAKESLQLSVHFLFHTYLHTKKKLRVDTEEWMTTVEVL
LSKSSVACGWMVQYLVGPEGREISRVCLLECSLREVRVVVASILEKTLESALHFREPGLD
GLVDALLSLLDKDVPENVKNCAQYFSLFSNFAQRGSTSCQLLLKHAAYRRMLVFLLGANR
QNNQNRRWSPAQAREFLHLHSTLALITLNSDLTAQRTHAPGAFKLSVSSVPPASALMPLH
ADLQASLFTPEGQPYLLEVMFAMRELSGPLSLLIDMMAYCSYCNEPFSFGVLQLLKTQLE
TAPPHELKNVFLMLQELLVVEDPLQAQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKF
LITLAQKCVPAKDYFKDLSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTNKTFQRTISA
QDTLAYATALLNEKEQSGSSNGSDGSPANENADRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7917 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaagaggagcagcatatgacaacgctcctatgcatgggctttccagacccc
gttgcaatacggaaagcgcttcgcttggcaaagaatgatataaacgaggcagtcgcgctt
ctaacgaacgaaagccccggactcgggtatggttatgagccaatggagagtgggcctacc
accggctcggggacaggaggagacggggaaaacagcgggcgtactgggacggggggtttt
gatcccccgcctgcataccacgatgtagtggacagcgagagaagtaacgatgagaatgga
aactgctctggaggtagcatggagttccccaccaccaacctttatgaactggagagccga
gtgttcaccgaccactggtccataccctacaagagagaggagtccctgggcaagtgtctc
atcgcttccacctgcctcgcccgacatggtttggctgatgcggacgagaactgtaagcgc
ttcatggataggtgcatgcatgaagccttcaaaaagttgctgaccagcagtgctgtccac
aagtggggcacagagatccatgagggaatctacaacatgctgatgcttctggtggaactg
gctgctgaaagagtcaagcaggatcccatcccagttaacttgatgggtgttctgaccatg
gcctttaaccctgataatgagtaccacttcaaaaaccgcatgaaggcctgtcagaggaac
tgggcagaactgtttggagaggaggccaacatgtttgctgtatcccctagcaacagctat
caaaaggagcctcacggttggctggtggacctggtgaatcgatttggagagatgggagga
ttcaccgccatccagaccaagcttaatactgaggaaatcgagatagcgtgtgtatcagcc
ctggttcagcctctcggagtttgtgcagaatacctcaactccagcctggtccagcccatg
cttgatccggtcatccacaagatgataacctatgtacagaacttggaggagaaagacctg
aaagacaagcgtctggtgagcatccccgaccttctgtcagccatcaagttgctgtgtatg
aggttccagagggagctggtcacggtggtggacgacctgcgcctggacaccctgctccgg
atgctcaagaccccccacttctccaccaagatgaactccctcaaggaggtgacaaagctt
attgaggagagcacagtgtctaaaactgttaaaaatgccattgacacagacaaactgctg
gattggctcgtggagaactctgttctgtcaatagcactggagggtaacatagaccaggcg
cagtactgtgaaagaataaagggaattatcgaactcctgggcagtaaactctctatggat
gaactttcaaagatctggagaatccaagccggccagtcttcaacggtgattgagaacatc
cacaccatcatcgccgctgctgctgtcaagtttaacttcgatcagctcagccacctcttt
gttctgatacagaagagttgggaggtggagagcgatcgcgtcagacaaaagctgctcagt
ctgatcggacggatcggccgagaagctcgctctgaggctacaacaggaaaggtgttggaa
gttctgtgggagctggcccacctccccaccctgcccaccagtctggttcagcaggcgtct
gaggagcacctggggatcctgagcgacgcttacgctgtcaaggagaccatcaagcggagt
tacatcatcaagtgcattgaggacattaagaagcttcagattcaggaggagagtaaaggc
agcgagtcgcaaagttcatttcttactggttcttggggcaagcggaaagctaacacatca
gtcaaagcttctcaacagagcagtcctcaggcagtttgggttgtccctgctcttcggcag
ctccacgagattacacgctccttcatcaagcagacctatcagaagcaggacaagagtatc
atccaggacctgaagaagaactttgagatcgtcaagctgatcacaggctccctggtgtgc
tgccaccggctggccgtcactgctgccgggaacaacggcctgtccagcagcaccctggtg
gacggacgctacacctatcaggagtacctggacggccacttgcgtttcctggccttcttc
cttcaggaggccagcctctacctggtgtggaaccgggccaaggagatctgggagtgcctg
gtgtccggccctgatgtctgtgagcaggacagagagatgtgttttgagtggttcaccaaa
ggccagcatgacctggagagtgatgtccagcagcagctatttaaggagaagatcctaaaa
ctggagccctatgagatcaccatgaatggattcaatctcttcaaaaccttttttgagaac
gtcaacctgtgtgaccatcgcctgaagcgccagggaacgcaactgtgtgtggagcgactg
gatctggtcgggatggattttatctggcgaatcgccatggagactccagatgaagagatc
gccaacgaggctatccagctcataattacatacagctacaccaaccttaaccccaaaatg
aagaaggactctgtgtctttgcacaagaagttcatcgctgattgttacaaacggctcgag
gcggcaagctctgctcttggcgggccaaccttgacacatgctgttaccagggcaacaaag
atgctcacagccaccgcaatgcctacggtggccacctccgtgcagtctccatccaggtac
acagcaggcgggtctgggtccacaaagcttgtgatcattgagagactgcttcttctggcg
gaacgatacgtcctaactatagaggatcagtactcggtccctcgcactatcctacctcac
ggcgcatcgttcaacggccacccggtgacccttcatgtcacctacgagtccaccaaagac
accttcaccctggaggcccacagtaatgagaccatagggagcgtcagatggaagatatct
gagcacctcagctgccctgtggacaacgtccagatctttgccaacgacagcgtgctgacg
atgaaccgggaccagaagctgctctcccagctgggcttcagcgacgagcagagcctgacg
gttaagagctccagcactggcacaccctctggcagctcggagtcctccacctcggcctcc
agcagctccagctccgccgtgttcaactctgcctacgcactggagcaggagaaatctctg
cctggagtggtgatggctttggtgtgcaacgtgtttgagatgctttaccagctggctaat
ctggatgaatccaggatcactctgcgggtgcggaagttgctgctgctaataccaacagac
cctgaggtgcaggatgctttggacaactttgttcccaaagagtccagcgtttggagtcac
cagaagaccctcttcacgctgggtcagagtgcaggatctcgctctccatccatgtcctcc
aagcagcagcaccagcccagtgccgcctcgatcctcgagtccctgttcaggtcctccgct
ccgggcatgtccaccttcagggtgctctacaacctggaggtgctgagctctaagctgatg
cccacatctgacgatgagatggccaagaccagtgtcaagtccttctgtgagaacttcctc
aaggctggaggcctcagtctggtggtgaacgtaatgcagagggattccatcccctcagaa
gtggactatgagaccagacaaggagtctactccatctgtcttcagctggccaggttcctc
ctggtgggccagagcatgcccgcctcattggacgacgacaacctcagggacggcgacgcg
ctgtcgtcacggccgttccggaacgcggggcgggccggcaggcagttgtctctctgtggg
accccagagaaatcctcctacaggcagatgtccctctcggagcgctcctccattcgggtg
gaggagatcgtccctgcagcccgagtggccatccaaacaatggaggtgggtgactacacc
tccactgtggcctgtttcatgagactgacctgggccgctgctgctgggcgactagaccta
gtgggcagccctcagccaatcagagacagccacagttcattgctccctcaaggcgttcgc
accagagtgagcagcacaggaagtaactgcagctccagcagcgagggcgagggcactcct
accgcattgcatgctgggatatgcgtgagacaacagagcgtctccatcaaagacaccatc
atcgcccgggaggctttgtcacttctggtgacttgtctgcagctccgctgccagcagctc
tcatctttttacaacctgccctctgttaacgacttcatcatcgacatcctgctggggtcc
tccagcggagagatccgtcgggttgcctgcgaccagctgtacactctgagccagtcggac
acctcaggcttacaggaggtgcagaagcccaacctgttcctgctgacggtggtcctcagc
gcccagctgcccctctggagcccaacctccgtcatgaggggagtcaaccagagattactt
tctcagtgcactgaatattttgaactgaggtgtcagcttctggacgacctgaccagctct
gagatggaggcgttgaagttgagcgcggccaacatgctggaggacgagatctcctggctg
gacaactttgagcccagctggggctccgagatggagaccagcgaggctgacaacatcctg
caggcagggcatctccgcctcatcaagacactgctctcactctgcggcaaggagaaggaa
caactcggtccgtcgctgatccagcagctgttggatgacttcctgttccgtgcctcgcgc
atcattatcaacagctctaaccccgcgcctgcccccacccccagccatgacttccaccca
aagtgcagcaccgccagcagcaggctagcagcctacgaggtgctggtgatgttggcggac
agctctctgcccaacctgcagctgattaccaaggagctgctgtccatgcaccacacgcct
gacccctccctcagcaaggagtttgattacctacccccggtcgacagccgctccgtatct
gggtttgtggggctgaagaacggcggagccacttgctacatgaacgctgtgttccagcag
ctctacatgcagcctggcctgccagaggcgatcttgtctattgaggacgacaccgagcag
ccagaggagagcgtgttctgtcaagtccagtccctgttcggtcacctgatggagagcaag
ttgcagtactacatccctgagaacttctggaagatcttcaagatgtggaataaggagttg
tacgtacgggagcaacaggatgcttatgagttcttcaccagcctagtggaccagctggac
gaacatctcaagaaaatagggcgggaacagctgtttaaaaacactttccaggggattttc
tctgaccaaaagatttgtaaagactgtcctcaccggtacgagcgagaagagacattcatg
gccttgaacctgggtgtgacctcctgccagagtcttgagatctcactggaccagtttgtc
aggggggaggtgctggaaggcagcaatgcctactactgtgagaaatgcaaggagaagaga
accacagtgaagcggacgtgtatcaagtccctgccgagtgtgctctgcatccacctcatg
cgctttggcttcgactgggaaagcggacgctccataaagtacgatgagcagatcaagttc
ccctgggtgttgaacatggagccctacacggtgtccggtatggcacgccaggactgcagc
ggggaggctggggagggccgcggcgacggggctgccggtggctcgccccgcaagaaggta
accatatcggagaactacgagctggtgggagttgtagtccacagcggccaggcgcacgct
ggacactactactccttcatcaaagacagacggggaggcgcacgcggacgctggtacaag
ttcaatgacaacgtggtcgaggagtttgacatgaacgatgaaaccctggagtacgagtgc
ttcggaggggagtaccgccctaaggtctacgaccagtccaacccataccctgatgtgcgc
cggaggtactggaacgcttacatgctgttctaccagagaataagtgaccagaactctcca
gtccttcccaagaaaagcagggtcagcgtaatgagacaggaggccgaggacctcactctg
caaacgcaggtttcacattctccacacagctccgccccctcctctcccgacatctcaccc
cagtcgtccccccgcccgcccagggcaaacaacgaccggctcaccctcctcacccgtctg
gtgaggaagggggagaagaagggtctgtttgtggagaagatgccggccagtatctaccag
atggtacgagacgagaatctgaagttcatgaggaaccgcgacgtgtacaacagcgactac
ttcaacttcacactatccctggcctccgtcaacgcaacaaaactcaagcatcccgactac
caggccatggccaaagagagtctccagttgtctgtccatttcctcttccacacgtacctg
cacaccaaaaagaagctcagggtggacacagaggagtggatgactacggtggaggtgctg
ctgtctaaaagcagcgtggcatgtggctggatggtgcagtatctggtgggaccagagggc
cgagagatctccagggtgtgtctgctggagtgcagcctgcgtgaggtccgggtggtagtg
gcctccatcctggagaagaccctggagagcgccctgcacttcagggagccgggcctggac
ggcctggtggatgcactgctctccctgctggacaaggacgtcccagagaacgtcaagaac
tgcgcccagtacttcagcctcttcagcaacttcgcacagcggggctccacctcatgccag
ttgttactgaaacatgcagcctatcgccggatgcttgtattcctcctcggagccaacagg
cagaacaaccagaaccgccgctggagtccggcgcaagcccgcgagttcctccacctgcac
agcaccctggccctcatcaccctgaactctgacctcacagcccagaggacccatgccccg
ggagcgttcaagctgagtgtgagcagtgtgccccctgccagtgctctcatgccgctccac
gccgacctgcaggcctctctcttcaccccagaggggcaaccatacctcctggaggtgatg
tttgccatgcgggagctgtctggaccactgtccctcctcatcgacatgatggcctactgc
tcctactgcaatgagcctttctccttcggagtcctacagctactcaagacccagttagag
acagctccaccacatgaactgaagaatgtgttcctgatgctccaggagcttctggtggtt
gaagaccctctccaggcccagcgactcaagtatgcgtttgagtcagaaaagggcttgtta
gcgctgatgcaccagagcaacaacgtggacagcagccgctgctaccagtgtgtcaagttc
ctgatcacactggcccagaagtgcgttccagccaaagattacttcaaggatctctctggt
cactggagctgggcggtccagtggttacagaagaagatgtccgaacattactggactcct
cagagcaacgtgtccaacgagacgtccaccaacaagaccttccagcgtactatctcagca
caggacacgttggcctatgcaacagccctgctgaatgagaaggagcagtccggcagcagt
aacggctctgatgggagcccagccaatgagaacgcagaccgaagcctccgccagggttca
gaatctcccatgatgctcggcgactcgaagagcgatctggaggacgttgatccctga
DBGET
integrated database retrieval system
